RNA–Protein interactions for RNA: ENST00000605875.1

CCDC12-213, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-213ENST00000605875 DPY19L2Q6NUT2 758 aa24.16■■□□□ 1.46
CCDC12-213ENST00000605875 JMYQ8N9B5 988 aa24.16■■□□□ 1.46
CCDC12-213ENST00000605875 PRAMEF22A3QJZ6 481 aa24.15■■□□□ 1.46
CCDC12-213ENST00000605875 MCM10Q7L590 875 aa24.15■■□□□ 1.46
CCDC12-213ENST00000605875 CNKSR1Q969H4 720 aa24.15■■□□□ 1.46
CCDC12-213ENST00000605875 DICER1Q9UPY3 1922 aaKnown RBP24.15■■□□□ 1.46
CCDC12-213ENST00000605875 SNRPA1P09661 255 aaKnown RBP24.14■■□□□ 1.45
CCDC12-213ENST00000605875 ERFEQ4G0M1 354 aa24.14■■□□□ 1.45
CCDC12-213ENST00000605875 STYK1Q6J9G0 422 aa24.14■■□□□ 1.45
CCDC12-213ENST00000605875 CACNA1SQ13698 1873 aa24.13■■□□□ 1.45
CCDC12-213ENST00000605875 SLX4Q8IY92 1834 aa24.13■■□□□ 1.45
CCDC12-213ENST00000605875 SRGNP10124 158 aa24.13■■□□□ 1.45
CCDC12-213ENST00000605875 MASTLQ96GX5 879 aa24.13■■□□□ 1.45
CCDC12-213ENST00000605875 POTECB2RU33 542 aa24.12■■□□□ 1.45
CCDC12-213ENST00000605875 CLEC4GQ6UXB4 293 aa24.12■■□□□ 1.45
CCDC12-213ENST00000605875 TAOK3Q9H2K8 898 aa24.12■■□□□ 1.45
CCDC12-213ENST00000605875 LTBP3Q9NS15 1303 aa24.11■■□□□ 1.45
CCDC12-213ENST00000605875 DCTN1Q14203 1278 aa24.11■■□□□ 1.45
CCDC12-213ENST00000605875 PRPF40BQ6NWY9 871 aaKnown RBP24.11■■□□□ 1.45
CCDC12-213ENST00000605875 NBPF5PQ86XG9 351 aaPredicted RBP24.11■■□□□ 1.45
CCDC12-213ENST00000605875 ZNF652Q9Y2D9 606 aa24.11■■□□□ 1.45
CCDC12-213ENST00000605875 DLG5Q8TDM6 1919 aa24.11■■□□□ 1.45
CCDC12-213ENST00000605875 HTATSF1O43719 755 aaKnown RBP24.1■■□□□ 1.45
CCDC12-213ENST00000605875 RALBP1Q15311 655 aa24.1■■□□□ 1.45
CCDC12-213ENST00000605875 ARFGEF2Q9Y6D5 1785 aa24.09■■□□□ 1.45
CCDC12-213ENST00000605875 SOGA3Q5TF21 947 aa24.09■■□□□ 1.45
CCDC12-213ENST00000605875 NBPF26B4DH59 902 aa24.07■■□□□ 1.44
CCDC12-213ENST00000605875 NBPF10Q6P3W6 841 aaKnown RBP24.07■■□□□ 1.44
CCDC12-213ENST00000605875 NBPF15Q8N660 670 aa24.07■■□□□ 1.44
CCDC12-213ENST00000605875 TAF7Q15545 349 aaPredicted RBP24.06■■□□□ 1.44
CCDC12-213ENST00000605875 TPTE2Q6XPS3 522 aa24.06■■□□□ 1.44
CCDC12-213ENST00000605875 NIP7Q9Y221 180 aaKnown RBP eCLIP24.06■■□□□ 1.44
CCDC12-213ENST00000605875 DDNO94850 711 aaPredicted RBP24.05■■□□□ 1.44
CCDC12-213ENST00000605875 MYBBP1AQ9BQG0 1328 aaKnown RBP24.05■■□□□ 1.44
CCDC12-213ENST00000605875 RGL2O15211 777 aa24.04■■□□□ 1.44
CCDC12-213ENST00000605875 NEFMP07197 916 aa24.04■■□□□ 1.44
CCDC12-213ENST00000605875 NPR1P16066 1061 aa24.04■■□□□ 1.44
CCDC12-213ENST00000605875 MIS18AQ9NYP9 233 aa24.04■■□□□ 1.44
CCDC12-213ENST00000605875 FAM177BA6PVY3 158 aa24.03■■□□□ 1.44
CCDC12-213ENST00000605875 CCDC93Q567U6 631 aa24.03■■□□□ 1.44
CCDC12-213ENST00000605875 COL13A1Q5TAT6 717 aaPredicted RBP24.03■■□□□ 1.44
CCDC12-213ENST00000605875 C7orf43Q8WVR3 580 aa24.03■■□□□ 1.44
CCDC12-213ENST00000605875 PLEKHF1Q96S99 279 aa24.03■■□□□ 1.44
CCDC12-213ENST00000605875 KLRG2A4D1S0 409 aaPredicted RBP24.02■■□□□ 1.44
CCDC12-213ENST00000605875 HLFQ16534 295 aa24.01■■□□□ 1.43
CCDC12-213ENST00000605875 MAPK8IP3Q9UPT6 1336 aa24.01■■□□□ 1.43
CCDC12-213ENST00000605875 KDM3BQ7LBC6 1761 aa24.01■■□□□ 1.43
CCDC12-213ENST00000605875 CHADLQ6NUI6 762 aa24■■□□□ 1.43
CCDC12-213ENST00000605875 LAMB4A4D0S4 1761 aa23.99■■□□□ 1.43
CCDC12-213ENST00000605875 PNISRQ8TF01 805 aaKnown RBP23.99■■□□□ 1.43
CCDC12-213ENST00000605875 POTEIP0CG38 1075 aa23.98■■□□□ 1.43
CCDC12-213ENST00000605875 POTEJP0CG39 1038 aa23.98■■□□□ 1.43
CCDC12-213ENST00000605875 GTF2E1P29083 439 aaPredicted RBP23.98■■□□□ 1.43
CCDC12-213ENST00000605875 FKBP4Q02790 459 aaKnown RBP eCLIP23.98■■□□□ 1.43
CCDC12-213ENST00000605875 NFE2L2Q16236 605 aa23.98■■□□□ 1.43
CCDC12-213ENST00000605875 NGEFQ8N5V2 710 aa23.98■■□□□ 1.43
CCDC12-213ENST00000605875 ZEB1P37275 1124 aaPredicted RBP23.97■■□□□ 1.43
CCDC12-213ENST00000605875 IQCA1LA6NCM1 817 aa23.96■■□□□ 1.43
CCDC12-213ENST00000605875 ALDH1B1P30837 517 aa23.96■■□□□ 1.43
CCDC12-213ENST00000605875 OLFM4Q6UX06 510 aa23.96■■□□□ 1.43
CCDC12-213ENST00000605875 RTKN2Q8IZC4 609 aa23.96■■□□□ 1.43
CCDC12-213ENST00000605875 ZNF277Q9NRM2 450 aaPredicted RBP23.96■■□□□ 1.43
CCDC12-213ENST00000605875 HSPA1AP0DMV8 641 aaKnown RBP23.95■■□□□ 1.42
CCDC12-213ENST00000605875 HSPA1BP0DMV9 641 aaKnown RBP23.95■■□□□ 1.42
CCDC12-213ENST00000605875 L3MBTL3Q96JM7 780 aaPredicted RBP23.95■■□□□ 1.42
CCDC12-213ENST00000605875 THUMPD2Q9BTF0 503 aaKnown RBP23.95■■□□□ 1.42
CCDC12-213ENST00000605875 SCN4AP35499 1836 aa23.95■■□□□ 1.42
CCDC12-213ENST00000605875 ERVV-1B6SEH8 477 aa23.94■■□□□ 1.42
CCDC12-213ENST00000605875 NYXQ9GZU5 481 aa23.94■■□□□ 1.42
CCDC12-213ENST00000605875 PNNQ9H307 717 aaKnown RBP23.94■■□□□ 1.42
CCDC12-213ENST00000605875 CREBZFQ9NS37 354 aa23.94■■□□□ 1.42
CCDC12-213ENST00000605875 RRP7AQ9Y3A4 280 aaKnown RBP23.94■■□□□ 1.42
CCDC12-213ENST00000605875 NUP98P52948 1817 aa23.94■■□□□ 1.42
CCDC12-213ENST00000605875 EIF4A1P60842 406 aaKnown RBP23.93■■□□□ 1.42
CCDC12-213ENST00000605875 TAF1DQ9H5J8 278 aaPredicted RBP23.93■■□□□ 1.42
CCDC12-213ENST00000605875 MAP3K15Q6ZN16 1313 aa23.92■■□□□ 1.42
CCDC12-213ENST00000605875 ZNF541Q9H0D2 1346 aa23.92■■□□□ 1.42
CCDC12-213ENST00000605875 LDHDQ86WU2 507 aa23.92■■□□□ 1.42
CCDC12-213ENST00000605875 NUTM1Q86Y26 1132 aa23.92■■□□□ 1.42
CCDC12-213ENST00000605875 TNS4Q8IZW8 715 aa23.92■■□□□ 1.42
CCDC12-213ENST00000605875 PRKRIP1Q9H875 184 aaPredicted RBP23.92■■□□□ 1.42
CCDC12-213ENST00000605875 KIF6Q6ZMV9 814 aa23.91■■□□□ 1.42
CCDC12-213ENST00000605875 TTLL7Q6ZT98 887 aa23.91■■□□□ 1.42
CCDC12-213ENST00000605875 SYNE4Q8N205 404 aa23.91■■□□□ 1.42
CCDC12-213ENST00000605875 MKRN1Q9UHC7 482 aaKnown RBP23.91■■□□□ 1.42
CCDC12-213ENST00000605875 PCNTO95613 3336 aa23.9■■□□□ 1.42
CCDC12-213ENST00000605875 MYL6BP14649 208 aa23.9■■□□□ 1.42
CCDC12-213ENST00000605875 IARSP41252 1262 aaKnown RBP23.9■■□□□ 1.42
CCDC12-213ENST00000605875 ABCC12Q96J65 1359 aa23.9■■□□□ 1.42
CCDC12-213ENST00000605875 WDR43Q15061 677 aaKnown RBP eCLIP23.89■■□□□ 1.41
CCDC12-213ENST00000605875 CRY2Q49AN0 593 aa23.89■■□□□ 1.41
CCDC12-213ENST00000605875 EAPPQ56P03 285 aaPredicted RBP23.89■■□□□ 1.41
CCDC12-213ENST00000605875 CCDC146Q8IYE0 955 aa23.89■■□□□ 1.41
CCDC12-213ENST00000605875 HACL1Q9UJ83 578 aa23.89■■□□□ 1.41
CCDC12-213ENST00000605875 GPTP24298 496 aa23.88■■□□□ 1.41
CCDC12-213ENST00000605875 ZBTB3Q9H5J0 574 aa23.88■■□□□ 1.41
CCDC12-213ENST00000605875 PASKQ96RG2 1323 aa23.87■■□□□ 1.41
CCDC12-213ENST00000605875 FZD9O00144 591 aa23.87■■□□□ 1.41
CCDC12-213ENST00000605875 PSMD1Q99460 953 aa23.87■■□□□ 1.41
CCDC12-213ENST00000605875 CAPN15O75808 1086 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms