RNA–Protein interactions for RNA: ENST00000605833.1

VIM-AS1-202, VIM antisense RNA 1, humanhuman

TSL 3 BASIC

Gene VIM-AS1, Length 918 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-AS1-202ENST00000605833 USP16Q9Y5T5 823 aa27.94■■■□□ 2.06
VIM-AS1-202ENST00000605833 ERFEQ4G0M1 354 aa27.93■■■□□ 2.06
VIM-AS1-202ENST00000605833 ST5P78524 1137 aa27.92■■■□□ 2.06
VIM-AS1-202ENST00000605833 MCM10Q7L590 875 aa27.92■■■□□ 2.06
VIM-AS1-202ENST00000605833 COL13A1Q5TAT6 717 aaPredicted RBP27.91■■■□□ 2.06
VIM-AS1-202ENST00000605833 PRPF40BQ6NWY9 871 aaKnown RBP27.91■■■□□ 2.06
VIM-AS1-202ENST00000605833 TAOK3Q9H2K8 898 aa27.91■■■□□ 2.06
VIM-AS1-202ENST00000605833 U2AF1L5P0DN76 240 aaPredicted RBP27.89■■■□□ 2.06
VIM-AS1-202ENST00000605833 SRGNP10124 158 aa27.89■■■□□ 2.06
VIM-AS1-202ENST00000605833 U2AF1Q01081 240 aaKnown RBP eCLIP27.89■■■□□ 2.06
VIM-AS1-202ENST00000605833 STYK1Q6J9G0 422 aa27.89■■■□□ 2.06
VIM-AS1-202ENST00000605833 DPY19L2Q6NUT2 758 aa27.89■■■□□ 2.06
VIM-AS1-202ENST00000605833 CNKSR1Q969H4 720 aa27.89■■■□□ 2.06
VIM-AS1-202ENST00000605833 DCTN1Q14203 1278 aa27.88■■■□□ 2.05
VIM-AS1-202ENST00000605833 LTBP3Q9NS15 1303 aa27.88■■■□□ 2.05
VIM-AS1-202ENST00000605833 LAMB4A4D0S4 1761 aa27.87■■■□□ 2.05
VIM-AS1-202ENST00000605833 RTF1Q92541 710 aaKnown RBP27.87■■■□□ 2.05
VIM-AS1-202ENST00000605833 NUDCQ9Y266 331 aa27.87■■■□□ 2.05
VIM-AS1-202ENST00000605833 PPP2R1AP30153 589 aa27.86■■■□□ 2.05
VIM-AS1-202ENST00000605833 NBPF5PQ86XG9 351 aaPredicted RBP27.86■■■□□ 2.05
VIM-AS1-202ENST00000605833 MASTLQ96GX5 879 aa27.86■■■□□ 2.05
VIM-AS1-202ENST00000605833 SNRPA1P09661 255 aaKnown RBP27.85■■■□□ 2.05
VIM-AS1-202ENST00000605833 DDNO94850 711 aaPredicted RBP27.84■■■□□ 2.05
VIM-AS1-202ENST00000605833 POTEIP0CG38 1075 aa27.84■■■□□ 2.05
VIM-AS1-202ENST00000605833 POTEJP0CG39 1038 aa27.84■■■□□ 2.05
VIM-AS1-202ENST00000605833 DLG5Q8TDM6 1919 aa27.83■■■□□ 2.05
VIM-AS1-202ENST00000605833 NBPF26B4DH59 902 aa27.83■■■□□ 2.05
VIM-AS1-202ENST00000605833 NBPF10Q6P3W6 841 aaKnown RBP27.83■■■□□ 2.05
VIM-AS1-202ENST00000605833 NBPF15Q8N660 670 aa27.83■■■□□ 2.05
VIM-AS1-202ENST00000605833 ZNF652Q9Y2D9 606 aa27.83■■■□□ 2.05
VIM-AS1-202ENST00000605833 FAM177BA6PVY3 158 aa27.81■■■□□ 2.04
VIM-AS1-202ENST00000605833 CLEC4GQ6UXB4 293 aa27.81■■■□□ 2.04
VIM-AS1-202ENST00000605833 HSPA1AP0DMV8 641 aaKnown RBP27.8■■■□□ 2.04
VIM-AS1-202ENST00000605833 HSPA1BP0DMV9 641 aaKnown RBP27.8■■■□□ 2.04
VIM-AS1-202ENST00000605833 SOGA3Q5TF21 947 aa27.8■■■□□ 2.04
VIM-AS1-202ENST00000605833 NIP7Q9Y221 180 aaKnown RBP eCLIP27.8■■■□□ 2.04
VIM-AS1-202ENST00000605833 KDM3BQ7LBC6 1761 aa27.79■■■□□ 2.04
VIM-AS1-202ENST00000605833 OLFM4Q6UX06 510 aa27.79■■■□□ 2.04
VIM-AS1-202ENST00000605833 CAPN15O75808 1086 aa27.78■■■□□ 2.04
VIM-AS1-202ENST00000605833 NPR1P16066 1061 aa27.78■■■□□ 2.04
VIM-AS1-202ENST00000605833 CCDC93Q567U6 631 aa27.78■■■□□ 2.04
VIM-AS1-202ENST00000605833 CHADLQ6NUI6 762 aa27.78■■■□□ 2.04
VIM-AS1-202ENST00000605833 C7orf43Q8WVR3 580 aa27.78■■■□□ 2.04
VIM-AS1-202ENST00000605833 MIS18AQ9NYP9 233 aa27.78■■■□□ 2.04
VIM-AS1-202ENST00000605833 SCN4AP35499 1836 aa27.77■■■□□ 2.04
VIM-AS1-202ENST00000605833 ZEB1P37275 1124 aaPredicted RBP27.77■■■□□ 2.04
VIM-AS1-202ENST00000605833 HLFQ16534 295 aa27.76■■■□□ 2.03
VIM-AS1-202ENST00000605833 TNS4Q8IZW8 715 aa27.76■■■□□ 2.03
VIM-AS1-202ENST00000605833 ZNF277Q9NRM2 450 aaPredicted RBP27.75■■■□□ 2.03
VIM-AS1-202ENST00000605833 NUP98P52948 1817 aa27.74■■■□□ 2.03
VIM-AS1-202ENST00000605833 ZNF541Q9H0D2 1346 aa27.74■■■□□ 2.03
VIM-AS1-202ENST00000605833 TPTE2Q6XPS3 522 aa27.74■■■□□ 2.03
VIM-AS1-202ENST00000605833 KLRG2A4D1S0 409 aaPredicted RBP27.73■■■□□ 2.03
VIM-AS1-202ENST00000605833 HTATSF1O43719 755 aaKnown RBP27.73■■■□□ 2.03
VIM-AS1-202ENST00000605833 TAF7Q15545 349 aaPredicted RBP27.73■■■□□ 2.03
VIM-AS1-202ENST00000605833 MKRN1Q9UHC7 482 aaKnown RBP27.73■■■□□ 2.03
VIM-AS1-202ENST00000605833 ABCC12Q96J65 1359 aa27.73■■■□□ 2.03
VIM-AS1-202ENST00000605833 FKBP4Q02790 459 aaKnown RBP eCLIP27.72■■■□□ 2.03
VIM-AS1-202ENST00000605833 NGEFQ8N5V2 710 aa27.72■■■□□ 2.03
VIM-AS1-202ENST00000605833 CREBZFQ9NS37 354 aa27.71■■■□□ 2.03
VIM-AS1-202ENST00000605833 IQCA1LA6NCM1 817 aa27.7■■■□□ 2.02
VIM-AS1-202ENST00000605833 L3MBTL3Q96JM7 780 aaPredicted RBP27.7■■■□□ 2.02
VIM-AS1-202ENST00000605833 TAF1DQ9H5J8 278 aaPredicted RBP27.7■■■□□ 2.02
VIM-AS1-202ENST00000605833 RGL2O15211 777 aa27.69■■■□□ 2.02
VIM-AS1-202ENST00000605833 GTF2E1P29083 439 aaPredicted RBP27.68■■■□□ 2.02
VIM-AS1-202ENST00000605833 LDHDQ86WU2 507 aa27.68■■■□□ 2.02
VIM-AS1-202ENST00000605833 NUTM1Q86Y26 1132 aa27.68■■■□□ 2.02
VIM-AS1-202ENST00000605833 ADAMTSL1Q8N6G6 1762 aa27.68■■■□□ 2.02
VIM-AS1-202ENST00000605833 THUMPD2Q9BTF0 503 aaKnown RBP27.67■■■□□ 2.02
VIM-AS1-202ENST00000605833 EAPPQ56P03 285 aaPredicted RBP27.66■■■□□ 2.02
VIM-AS1-202ENST00000605833 SNED1Q8TER0 1413 aa27.66■■■□□ 2.02
VIM-AS1-202ENST00000605833 PASKQ96RG2 1323 aa27.66■■■□□ 2.02
VIM-AS1-202ENST00000605833 IARSP41252 1262 aaKnown RBP27.65■■■□□ 2.02
VIM-AS1-202ENST00000605833 TTLL7Q6ZT98 887 aa27.65■■■□□ 2.02
VIM-AS1-202ENST00000605833 RTKN2Q8IZC4 609 aa27.65■■■□□ 2.02
VIM-AS1-202ENST00000605833 RRP7AQ9Y3A4 280 aaKnown RBP27.65■■■□□ 2.02
VIM-AS1-202ENST00000605833 SYNE4Q8N205 404 aa27.64■■■□□ 2.02
VIM-AS1-202ENST00000605833 COL4A5P29400 1685 aa27.64■■■□□ 2.02
VIM-AS1-202ENST00000605833 RNF123Q5XPI4 1314 aa27.64■■■□□ 2.01
VIM-AS1-202ENST00000605833 MAP3K15Q6ZN16 1313 aa27.64■■■□□ 2.01
VIM-AS1-202ENST00000605833 CNTNAP1P78357 1384 aa27.63■■■□□ 2.01
VIM-AS1-202ENST00000605833 NEFMP07197 916 aa27.63■■■□□ 2.01
VIM-AS1-202ENST00000605833 MYL6BP14649 208 aa27.63■■■□□ 2.01
VIM-AS1-202ENST00000605833 GPTP24298 496 aa27.63■■■□□ 2.01
VIM-AS1-202ENST00000605833 ALDH1B1P30837 517 aa27.63■■■□□ 2.01
VIM-AS1-202ENST00000605833 SLC51AQ86UW1 340 aa27.63■■■□□ 2.01
VIM-AS1-202ENST00000605833 HACL1Q9UJ83 578 aa27.63■■■□□ 2.01
VIM-AS1-202ENST00000605833 EIF4A1P60842 406 aaKnown RBP27.62■■■□□ 2.01
VIM-AS1-202ENST00000605833 CRY2Q49AN0 593 aa27.62■■■□□ 2.01
VIM-AS1-202ENST00000605833 KIF6Q6ZMV9 814 aa27.62■■■□□ 2.01
VIM-AS1-202ENST00000605833 NYXQ9GZU5 481 aa27.62■■■□□ 2.01
VIM-AS1-202ENST00000605833 ZBTB3Q9H5J0 574 aa27.62■■■□□ 2.01
VIM-AS1-202ENST00000605833 UBN2Q6ZU65 1347 aa27.62■■■□□ 2.01
VIM-AS1-202ENST00000605833 PNISRQ8TF01 805 aaKnown RBP27.61■■■□□ 2.01
VIM-AS1-202ENST00000605833 PLEKHF1Q96S99 279 aa27.61■■■□□ 2.01
VIM-AS1-202ENST00000605833 CLEC11AQ9Y240 323 aa27.61■■■□□ 2.01
VIM-AS1-202ENST00000605833 ERVV-1B6SEH8 477 aa27.6■■■□□ 2.01
VIM-AS1-202ENST00000605833 EPHX2P34913 555 aa27.6■■■□□ 2.01
VIM-AS1-202ENST00000605833 NFE2L2Q16236 605 aa27.6■■■□□ 2.01
VIM-AS1-202ENST00000605833 FZD9O00144 591 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms