RNA–Protein interactions for RNA: ENST00000605142.1

UBE3B-213, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 1,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-213ENST00000605142 FER1L6Q2WGJ9 1857 aa16.02■□□□□ 0.16
UBE3B-213ENST00000605142 ERFEQ4G0M1 354 aa16.02■□□□□ 0.16
UBE3B-213ENST00000605142 BICDL1Q6ZP65 573 aa16.02■□□□□ 0.16
UBE3B-213ENST00000605142 USP16Q9Y5T5 823 aa16.02■□□□□ 0.16
UBE3B-213ENST00000605142 PASKQ96RG2 1323 aa16.01■□□□□ 0.15
UBE3B-213ENST00000605142 ZNF316A6NFI3 1004 aaPredicted RBP16.01■□□□□ 0.15
UBE3B-213ENST00000605142 FOXN1O15353 648 aa16.01■□□□□ 0.15
UBE3B-213ENST00000605142 CAMTA2O94983 1202 aa16.01■□□□□ 0.15
UBE3B-213ENST00000605142 IL6STP40189 918 aaPredicted RBP16.01■□□□□ 0.15
UBE3B-213ENST00000605142 PIP4K2AP48426 406 aaPredicted RBP16.01■□□□□ 0.15
UBE3B-213ENST00000605142 CTCFP49711 727 aaPredicted RBP16.01■□□□□ 0.15
UBE3B-213ENST00000605142 DCTN1Q14203 1278 aa16.01■□□□□ 0.15
UBE3B-213ENST00000605142 MCM10Q7L590 875 aa16.01■□□□□ 0.15
UBE3B-213ENST00000605142 CCDC24Q8N4L8 307 aa16.01■□□□□ 0.15
UBE3B-213ENST00000605142 FMNL2Q96PY5 1086 aa16.01■□□□□ 0.15
UBE3B-213ENST00000605142 PRKRIP1Q9H875 184 aaPredicted RBP16.01■□□□□ 0.15
UBE3B-213ENST00000605142 MKRN1Q9UHC7 482 aaKnown RBP16.01■□□□□ 0.15
UBE3B-213ENST00000605142 BTBD11A6QL63 1104 aa16■□□□□ 0.15
UBE3B-213ENST00000605142 HTATSF1O43719 755 aaKnown RBP16■□□□□ 0.15
UBE3B-213ENST00000605142 PDE6BP35913 854 aa16■□□□□ 0.15
UBE3B-213ENST00000605142 WDR43Q15061 677 aaKnown RBP eCLIP16■□□□□ 0.15
UBE3B-213ENST00000605142 BRIP1Q9BX63 1249 aa16■□□□□ 0.15
UBE3B-213ENST00000605142 A0A087WZG4 1122 aa15.99■□□□□ 0.15
UBE3B-213ENST00000605142 IQCA1LA6NCM1 817 aa15.99■□□□□ 0.15
UBE3B-213ENST00000605142 PRR5LQ6MZQ0 368 aa15.99■□□□□ 0.15
UBE3B-213ENST00000605142 AIDAQ96BJ3 306 aa15.99■□□□□ 0.15
UBE3B-213ENST00000605142 TEX13AQ9BXU3 409 aaPredicted RBP15.99■□□□□ 0.15
UBE3B-213ENST00000605142 SOGA3Q5TF21 947 aa15.98■□□□□ 0.15
UBE3B-213ENST00000605142 LDHDQ86WU2 507 aa15.98■□□□□ 0.15
UBE3B-213ENST00000605142 L3MBTL3Q96JM7 780 aaPredicted RBP15.98■□□□□ 0.15
UBE3B-213ENST00000605142 PLEKHF1Q96S99 279 aa15.98■□□□□ 0.15
UBE3B-213ENST00000605142 TAOK3Q9H2K8 898 aa15.98■□□□□ 0.15
UBE3B-213ENST00000605142 ZNF330Q9Y3S2 320 aaPredicted RBP15.98■□□□□ 0.15
UBE3B-213ENST00000605142 SCN4AP35499 1836 aa15.98■□□□□ 0.15
UBE3B-213ENST00000605142 NBPF26B4DH59 902 aa15.97■□□□□ 0.15
UBE3B-213ENST00000605142 NFE2L2Q16236 605 aa15.97■□□□□ 0.15
UBE3B-213ENST00000605142 NBPF10Q6P3W6 841 aaKnown RBP15.97■□□□□ 0.15
UBE3B-213ENST00000605142 NBPF15Q8N660 670 aa15.97■□□□□ 0.15
UBE3B-213ENST00000605142 WBP1LQ9NX94 342 aa15.97■□□□□ 0.15
UBE3B-213ENST00000605142 KDM3BQ7LBC6 1761 aa15.97■□□□□ 0.15
UBE3B-213ENST00000605142 SLX4Q8IY92 1834 aa15.96■□□□□ 0.15
UBE3B-213ENST00000605142 LAMB4A4D0S4 1761 aa15.96■□□□□ 0.15
UBE3B-213ENST00000605142 C21orf2O43822 256 aa15.96■□□□□ 0.15
UBE3B-213ENST00000605142 CACNA1SQ13698 1873 aa15.95■□□□□ 0.14
UBE3B-213ENST00000605142 TMEM88BA6NKF7 163 aa15.95■□□□□ 0.14
UBE3B-213ENST00000605142 DDNO94850 711 aaPredicted RBP15.95■□□□□ 0.14
UBE3B-213ENST00000605142 POTEIP0CG38 1075 aa15.95■□□□□ 0.14
UBE3B-213ENST00000605142 POTEJP0CG39 1038 aa15.95■□□□□ 0.14
UBE3B-213ENST00000605142 CNKSR1Q969H4 720 aa15.95■□□□□ 0.14
UBE3B-213ENST00000605142 ZNF622Q969S3 477 aaKnown RBP eCLIP15.95■□□□□ 0.14
UBE3B-213ENST00000605142 ITGBL1O95965 494 aaPredicted RBP15.94■□□□□ 0.14
UBE3B-213ENST00000605142 VEGFBP49765 207 aa15.94■□□□□ 0.14
UBE3B-213ENST00000605142 STYK1Q6J9G0 422 aa15.94■□□□□ 0.14
UBE3B-213ENST00000605142 DZIP3Q86Y13 1208 aaKnown RBP15.94■□□□□ 0.14
UBE3B-213ENST00000605142 MIS18AQ9NYP9 233 aa15.94■□□□□ 0.14
UBE3B-213ENST00000605142 PCDH10Q9P2E7 1040 aa15.94■□□□□ 0.14
UBE3B-213ENST00000605142 ARFGEF2Q9Y6D5 1785 aa15.93■□□□□ 0.14
UBE3B-213ENST00000605142 SNRPA1P09661 255 aaKnown RBP15.93■□□□□ 0.14
UBE3B-213ENST00000605142 LMOD3Q0VAK6 560 aa15.93■□□□□ 0.14
UBE3B-213ENST00000605142 TAF1DQ9H5J8 278 aaPredicted RBP15.93■□□□□ 0.14
UBE3B-213ENST00000605142 RASSF10A6NK89 507 aa15.92■□□□□ 0.14
UBE3B-213ENST00000605142 PNISRQ8TF01 805 aaKnown RBP15.92■□□□□ 0.14
UBE3B-213ENST00000605142 SRGNP10124 158 aa15.91■□□□□ 0.14
UBE3B-213ENST00000605142 MAP2K1Q02750 393 aaPredicted RBP15.91■□□□□ 0.14
UBE3B-213ENST00000605142 TAF7Q15545 349 aaPredicted RBP15.91■□□□□ 0.14
UBE3B-213ENST00000605142 CCDC146Q8IYE0 955 aa15.91■□□□□ 0.14
UBE3B-213ENST00000605142 CNBD1Q8NA66 436 aa15.91■□□□□ 0.14
UBE3B-213ENST00000605142 ABHD8Q96I13 439 aa15.91■□□□□ 0.14
UBE3B-213ENST00000605142 SETDB2Q96T68 719 aa15.91■□□□□ 0.14
UBE3B-213ENST00000605142 THUMPD2Q9BTF0 503 aaKnown RBP15.91■□□□□ 0.14
UBE3B-213ENST00000605142 ZNF219Q9P2Y4 722 aaPredicted RBP15.91■□□□□ 0.14
UBE3B-213ENST00000605142 ANP32CO43423 234 aa15.9■□□□□ 0.14
UBE3B-213ENST00000605142 LBX1P52954 281 aa15.9■□□□□ 0.14
UBE3B-213ENST00000605142 PNMA8AQ86V59 439 aaPredicted RBP15.9■□□□□ 0.14
UBE3B-213ENST00000605142 RUNDC1Q96C34 613 aa15.9■□□□□ 0.14
UBE3B-213ENST00000605142 MASTLQ96GX5 879 aa15.9■□□□□ 0.14
UBE3B-213ENST00000605142 RGS19P49795 217 aa15.89■□□□□ 0.13
UBE3B-213ENST00000605142 RIPK4P57078 832 aa15.89■□□□□ 0.13
UBE3B-213ENST00000605142 HLFQ16534 295 aa15.89■□□□□ 0.13
UBE3B-213ENST00000605142 PRPF40BQ6NWY9 871 aaKnown RBP15.89■□□□□ 0.13
UBE3B-213ENST00000605142 CLEC4GQ6UXB4 293 aa15.89■□□□□ 0.13
UBE3B-213ENST00000605142 NPM2Q86SE8 214 aaKnown RBP15.89■□□□□ 0.13
UBE3B-213ENST00000605142 C7orf43Q8WVR3 580 aa15.89■□□□□ 0.13
UBE3B-213ENST00000605142 ADAMTSL1Q8N6G6 1762 aa15.89■□□□□ 0.13
UBE3B-213ENST00000605142 HSPA8P11142 646 aaKnown RBP15.88■□□□□ 0.13
UBE3B-213ENST00000605142 TMPOP42166 694 aaKnown RBP15.88■□□□□ 0.13
UBE3B-213ENST00000605142 DEFB115Q30KQ5 88 aa15.88■□□□□ 0.13
UBE3B-213ENST00000605142 HACL1Q9UJ83 578 aa15.88■□□□□ 0.13
UBE3B-213ENST00000605142 NUP98P52948 1817 aa15.87■□□□□ 0.13
UBE3B-213ENST00000605142 KLRG2A4D1S0 409 aaPredicted RBP15.87■□□□□ 0.13
UBE3B-213ENST00000605142 ST5P78524 1137 aa15.87■□□□□ 0.13
UBE3B-213ENST00000605142 ADAMTS8Q9UP79 889 aa15.87■□□□□ 0.13
UBE3B-213ENST00000605142 EIF4A1P60842 406 aaKnown RBP15.86■□□□□ 0.13
UBE3B-213ENST00000605142 FAM161AQ3B820 660 aa15.86■□□□□ 0.13
UBE3B-213ENST00000605142 CCDC93Q567U6 631 aa15.86■□□□□ 0.13
UBE3B-213ENST00000605142 RRP7AQ9Y3A4 280 aaKnown RBP15.86■□□□□ 0.13
UBE3B-213ENST00000605142 RGL2O15211 777 aa15.85■□□□□ 0.13
UBE3B-213ENST00000605142 EPHX2P34913 555 aa15.85■□□□□ 0.13
UBE3B-213ENST00000605142 FKBP4Q02790 459 aaKnown RBP eCLIP15.85■□□□□ 0.13
UBE3B-213ENST00000605142 NEUROD2Q15784 382 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms