RNA–Protein interactions for RNA: ENST00000604814.5

TUBE1-209, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-209ENST00000604814 FAM161BQ96MY7 647 aa7.28□□□□□ -1.24
TUBE1-209ENST00000604814 MRS2Q9HD23 443 aa7.28□□□□□ -1.24
TUBE1-209ENST00000604814 GABBR1Q9UBS5 961 aa7.28□□□□□ -1.24
TUBE1-209ENST00000604814 MAFGO15525 162 aa7.28□□□□□ -1.24
TUBE1-209ENST00000604814 PRMT3O60678 531 aa7.28□□□□□ -1.24
TUBE1-209ENST00000604814 LILRA1O75019 489 aa7.28□□□□□ -1.24
TUBE1-209ENST00000604814 HSD3B2P26439 372 aa7.28□□□□□ -1.24
TUBE1-209ENST00000604814 ADD1P35611 737 aaKnown RBP7.28□□□□□ -1.24
TUBE1-209ENST00000604814 DPYDQ12882 1025 aa7.28□□□□□ -1.24
TUBE1-209ENST00000604814 PMM1Q92871 262 aa7.28□□□□□ -1.24
TUBE1-209ENST00000604814 TRIM47Q96LD4 638 aa7.28□□□□□ -1.24
TUBE1-209ENST00000604814 CCDC85AQ96PX6 553 aaPredicted RBP7.28□□□□□ -1.24
TUBE1-209ENST00000604814 GMLQ99445 158 aa7.28□□□□□ -1.24
TUBE1-209ENST00000604814 MRPL42Q9Y6G3 142 aaKnown RBP7.28□□□□□ -1.24
TUBE1-209ENST00000604814 ATP5J2-PTCD1G3V325 749 aa7.27□□□□□ -1.25
TUBE1-209ENST00000604814 U2SURPO15042 1029 aaKnown RBP7.27□□□□□ -1.25
TUBE1-209ENST00000604814 XPCQ01831 940 aaPredicted RBP7.27□□□□□ -1.25
TUBE1-209ENST00000604814 SOGA3Q5TF21 947 aa7.27□□□□□ -1.25
TUBE1-209ENST00000604814 DOLKQ9UPQ8 538 aa7.27□□□□□ -1.25
TUBE1-209ENST00000604814 MYCP01106 439 aaPredicted RBP7.26□□□□□ -1.25
TUBE1-209ENST00000604814 ADH1AP07327 375 aa7.26□□□□□ -1.25
TUBE1-209ENST00000604814 SNRPBP14678 240 aaKnown RBP7.26□□□□□ -1.25
TUBE1-209ENST00000604814 ARHGAP4P98171 946 aa7.26□□□□□ -1.25
TUBE1-209ENST00000604814 NCOA4Q13772 614 aa7.26□□□□□ -1.25
TUBE1-209ENST00000604814 FAM50AQ14320 339 aaKnown RBP7.26□□□□□ -1.25
TUBE1-209ENST00000604814 TSGA10IPQ3SY00 556 aa7.26□□□□□ -1.25
TUBE1-209ENST00000604814 FILIP1Q7Z7B0 1213 aa7.26□□□□□ -1.25
TUBE1-209ENST00000604814 PHTF2Q8N3S3 785 aa7.26□□□□□ -1.25
TUBE1-209ENST00000604814 METTL5Q9NRN9 209 aaKnown RBP7.26□□□□□ -1.25
TUBE1-209ENST00000604814 HMGB1P1B2RPK0 211 aaPredicted RBP7.25□□□□□ -1.25
TUBE1-209ENST00000604814 CREB3O43889 395 aa7.25□□□□□ -1.25
TUBE1-209ENST00000604814 EIF3JO75822 258 aaKnown RBP7.25□□□□□ -1.25
TUBE1-209ENST00000604814 ERVK-9P63128 1117 aa7.25□□□□□ -1.25
TUBE1-209ENST00000604814 ECM1Q16610 540 aa7.25□□□□□ -1.25
TUBE1-209ENST00000604814 PLEKHG6Q3KR16 790 aa7.25□□□□□ -1.25
TUBE1-209ENST00000604814 OXLD1Q5BKU9 147 aa7.25□□□□□ -1.25
TUBE1-209ENST00000604814 TAS1R3Q7RTX0 852 aa7.25□□□□□ -1.25
TUBE1-209ENST00000604814 SPOCK3Q9BQ16 436 aa7.25□□□□□ -1.25
TUBE1-209ENST00000604814 ZNF395Q9H8N7 513 aaPredicted RBP7.25□□□□□ -1.25
TUBE1-209ENST00000604814 PCDH12Q9NPG4 1184 aa7.25□□□□□ -1.25
TUBE1-209ENST00000604814 G3BP2Q9UN86 482 aaKnown RBP7.25□□□□□ -1.25
TUBE1-209ENST00000604814 ZNF76P36508 570 aa7.25□□□□□ -1.25
TUBE1-209ENST00000604814 SCTRP47872 440 aa7.25□□□□□ -1.25
TUBE1-209ENST00000604814 ARID5AQ03989 594 aa7.25□□□□□ -1.25
TUBE1-209ENST00000604814 CCDC146Q8IYE0 955 aa7.25□□□□□ -1.25
TUBE1-209ENST00000604814 ZNF594Q96JF6 807 aaPredicted RBP7.25□□□□□ -1.25
TUBE1-209ENST00000604814 UBA5Q9GZZ9 404 aa7.25□□□□□ -1.25
TUBE1-209ENST00000604814 IRF2BPLQ9H1B7 796 aa7.25□□□□□ -1.25
TUBE1-209ENST00000604814 IFT57Q9NWB7 429 aa7.25□□□□□ -1.25
TUBE1-209ENST00000604814 TERF2IPQ9NYB0 399 aa7.25□□□□□ -1.25
TUBE1-209ENST00000604814 PTGIRP43119 386 aa7.24□□□□□ -1.25
TUBE1-209ENST00000604814 USP4Q13107 963 aa7.24□□□□□ -1.25
TUBE1-209ENST00000604814 PLPP7Q8NBV4 271 aa7.24□□□□□ -1.25
TUBE1-209ENST00000604814 GTF3C2Q8WUA4 911 aaPredicted RBP7.24□□□□□ -1.25
TUBE1-209ENST00000604814 PLCD4Q9BRC7 762 aa7.24□□□□□ -1.25
TUBE1-209ENST00000604814 CXXC1Q9P0U4 656 aaPredicted RBP7.24□□□□□ -1.25
TUBE1-209ENST00000604814 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.24□□□□□ -1.25
TUBE1-209ENST00000604814 MAN1A2O60476 641 aa7.23□□□□□ -1.25
TUBE1-209ENST00000604814 MTMR3Q13615 1198 aa7.23□□□□□ -1.25
TUBE1-209ENST00000604814 MAP7D1Q3KQU3 841 aa7.23□□□□□ -1.25
TUBE1-209ENST00000604814 CYP2U1Q7Z449 544 aa7.23□□□□□ -1.25
TUBE1-209ENST00000604814 PRIMPOLQ96LW4 560 aa7.23□□□□□ -1.25
TUBE1-209ENST00000604814 PARP2Q9UGN5 583 aa7.23□□□□□ -1.25
TUBE1-209ENST00000604814 LAS1LQ9Y4W2 734 aaKnown RBP7.23□□□□□ -1.25
TUBE1-209ENST00000604814 LOC100996750A0A140TA64 210 aa7.23□□□□□ -1.25
TUBE1-209ENST00000604814 SPINT1O43278 529 aa7.23□□□□□ -1.25
TUBE1-209ENST00000604814 S100BP04271 92 aaPredicted RBP7.23□□□□□ -1.25
TUBE1-209ENST00000604814 PDE3BQ13370 1112 aa7.23□□□□□ -1.25
TUBE1-209ENST00000604814 FOXD4L6Q3SYB3 417 aaPredicted RBP7.23□□□□□ -1.25
TUBE1-209ENST00000604814 FOXD4L3Q6VB84 417 aaPredicted RBP7.23□□□□□ -1.25
TUBE1-209ENST00000604814 CCAR1Q8IX12 1150 aaKnown RBP7.23□□□□□ -1.25
TUBE1-209ENST00000604814 OGFOD1Q8N543 542 aa7.23□□□□□ -1.25
TUBE1-209ENST00000604814 EVI5LQ96CN4 794 aa7.23□□□□□ -1.25
TUBE1-209ENST00000604814 SGSM3Q96HU1 749 aa7.23□□□□□ -1.25
TUBE1-209ENST00000604814 CCDC136Q96JN2 1154 aa7.23□□□□□ -1.25
TUBE1-209ENST00000604814 INSM2Q96T92 566 aaPredicted RBP7.23□□□□□ -1.25
TUBE1-209ENST00000604814 KRTAP4-6Q9BYQ5 205 aa7.23□□□□□ -1.25
TUBE1-209ENST00000604814 POLMQ9NP87 494 aaPredicted RBP7.23□□□□□ -1.25
TUBE1-209ENST00000604814 PRDM10Q9NQV6 1147 aa7.23□□□□□ -1.25
TUBE1-209ENST00000604814 VTI1BQ9UEU0 232 aa7.23□□□□□ -1.25
TUBE1-209ENST00000604814 INPP5FQ9Y2H2 1132 aa7.23□□□□□ -1.25
TUBE1-209ENST00000604814 DNMT3AQ9Y6K1 912 aaPredicted RBP7.23□□□□□ -1.25
TUBE1-209ENST00000604814 TTLL8A6PVC2 850 aa7.22□□□□□ -1.25
TUBE1-209ENST00000604814 SORBS3O60504 671 aa7.22□□□□□ -1.25
TUBE1-209ENST00000604814 STK10O94804 968 aaKnown RBP7.22□□□□□ -1.25
TUBE1-209ENST00000604814 FKBP4Q02790 459 aaKnown RBP eCLIP7.22□□□□□ -1.25
TUBE1-209ENST00000604814 OCLNQ16625 522 aa7.22□□□□□ -1.25
TUBE1-209ENST00000604814 TMC7Q7Z402 723 aa7.22□□□□□ -1.25
TUBE1-209ENST00000604814 OSBPL3Q9H4L5 887 aa7.22□□□□□ -1.25
TUBE1-209ENST00000604814 FIGNL2A6NMB9 653 aa7.21□□□□□ -1.25
TUBE1-209ENST00000604814 SOBPA7XYQ1 873 aa7.21□□□□□ -1.25
TUBE1-209ENST00000604814 MEN1O00255 615 aa7.21□□□□□ -1.25
TUBE1-209ENST00000604814 ITGAEP38570 1179 aa7.21□□□□□ -1.25
TUBE1-209ENST00000604814 RPUSD2Q8IZ73 545 aaKnown RBP7.21□□□□□ -1.25
TUBE1-209ENST00000604814 MRFAP1L1Q96HT8 127 aa7.21□□□□□ -1.25
TUBE1-209ENST00000604814 DUSP9Q99956 384 aaKnown RBP7.21□□□□□ -1.25
TUBE1-209ENST00000604814 CHIC2Q9UKJ5 165 aa7.21□□□□□ -1.25
TUBE1-209ENST00000604814 SOS2Q07890 1332 aaPredicted RBP7.21□□□□□ -1.26
TUBE1-209ENST00000604814 DNAJC6O75061 913 aa7.2□□□□□ -1.26
TUBE1-209ENST00000604814 PPFIA4O75335 1185 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms