RNA–Protein interactions for RNA: ENST00000604419.1

SRGAP2-210, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 3

Gene SRGAP2, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-210ENST00000604419 TAOK3Q9H2K8 898 aa12.94□□□□□ -0.34
SRGAP2-210ENST00000604419 ZNF652Q9Y2D9 606 aa12.94□□□□□ -0.34
SRGAP2-210ENST00000604419 USP16Q9Y5T5 823 aa12.94□□□□□ -0.34
SRGAP2-210ENST00000604419 POTECB2RU33 542 aa12.93□□□□□ -0.34
SRGAP2-210ENST00000604419 KCNQ3O43525 872 aa12.93□□□□□ -0.34
SRGAP2-210ENST00000604419 U2AF1L5P0DN76 240 aaPredicted RBP12.93□□□□□ -0.34
SRGAP2-210ENST00000604419 U2AF1Q01081 240 aaKnown RBP eCLIP12.93□□□□□ -0.34
SRGAP2-210ENST00000604419 TPTE2Q6XPS3 522 aa12.93□□□□□ -0.34
SRGAP2-210ENST00000604419 CCDC24Q8N4L8 307 aa12.93□□□□□ -0.34
SRGAP2-210ENST00000604419 ZNF219Q9P2Y4 722 aaPredicted RBP12.93□□□□□ -0.34
SRGAP2-210ENST00000604419 CACNB1Q02641 598 aaPredicted RBP12.92□□□□□ -0.34
SRGAP2-210ENST00000604419 PRPF40BQ6NWY9 871 aaKnown RBP12.92□□□□□ -0.34
SRGAP2-210ENST00000604419 NBPF5PQ86XG9 351 aaPredicted RBP12.92□□□□□ -0.34
SRGAP2-210ENST00000604419 SIPA1L3O60292 1781 aaPredicted RBP12.92□□□□□ -0.34
SRGAP2-210ENST00000604419 KLRG2A4D1S0 409 aaPredicted RBP12.91□□□□□ -0.34
SRGAP2-210ENST00000604419 SCN7AQ01118 1682 aa12.9□□□□□ -0.34
SRGAP2-210ENST00000604419 IQCA1LA6NCM1 817 aa12.9□□□□□ -0.34
SRGAP2-210ENST00000604419 NPR1P16066 1061 aa12.9□□□□□ -0.34
SRGAP2-210ENST00000604419 TAF7Q15545 349 aaPredicted RBP12.9□□□□□ -0.34
SRGAP2-210ENST00000604419 COL13A1Q5TAT6 717 aaPredicted RBP12.9□□□□□ -0.34
SRGAP2-210ENST00000604419 CHADLQ6NUI6 762 aa12.9□□□□□ -0.34
SRGAP2-210ENST00000604419 MCM10Q7L590 875 aa12.9□□□□□ -0.34
SRGAP2-210ENST00000604419 C7orf43Q8WVR3 580 aa12.9□□□□□ -0.34
SRGAP2-210ENST00000604419 ANKRD31Q8N7Z5 1873 aa12.89□□□□□ -0.35
SRGAP2-210ENST00000604419 DDNO94850 711 aaPredicted RBP12.89□□□□□ -0.35
SRGAP2-210ENST00000604419 NEFMP07197 916 aa12.89□□□□□ -0.35
SRGAP2-210ENST00000604419 PPP2R1AP30153 589 aa12.89□□□□□ -0.35
SRGAP2-210ENST00000604419 ALDH1B1P30837 517 aa12.89□□□□□ -0.35
SRGAP2-210ENST00000604419 CCDC93Q567U6 631 aa12.89□□□□□ -0.35
SRGAP2-210ENST00000604419 CCDC88AQ3V6T2 1871 aa12.89□□□□□ -0.35
SRGAP2-210ENST00000604419 PRAMEF22A3QJZ6 481 aa12.88□□□□□ -0.35
SRGAP2-210ENST00000604419 RTKN2Q8IZC4 609 aa12.88□□□□□ -0.35
SRGAP2-210ENST00000604419 PNISRQ8TF01 805 aaKnown RBP12.88□□□□□ -0.35
SRGAP2-210ENST00000604419 CREBZFQ9NS37 354 aa12.88□□□□□ -0.35
SRGAP2-210ENST00000604419 NIP7Q9Y221 180 aaKnown RBP eCLIP12.88□□□□□ -0.35
SRGAP2-210ENST00000604419 FER1L6Q2WGJ9 1857 aa12.88□□□□□ -0.35
SRGAP2-210ENST00000604419 TIAM2Q8IVF5 1701 aa12.88□□□□□ -0.35
SRGAP2-210ENST00000604419 NBPF26B4DH59 902 aa12.87□□□□□ -0.35
SRGAP2-210ENST00000604419 GTF2E1P29083 439 aaPredicted RBP12.87□□□□□ -0.35
SRGAP2-210ENST00000604419 PIP4K2AP48426 406 aaPredicted RBP12.87□□□□□ -0.35
SRGAP2-210ENST00000604419 FKBP4Q02790 459 aaKnown RBP eCLIP12.87□□□□□ -0.35
SRGAP2-210ENST00000604419 NBPF10Q6P3W6 841 aaKnown RBP12.87□□□□□ -0.35
SRGAP2-210ENST00000604419 TNS4Q8IZW8 715 aa12.87□□□□□ -0.35
SRGAP2-210ENST00000604419 NBPF15Q8N660 670 aa12.87□□□□□ -0.35
SRGAP2-210ENST00000604419 L3MBTL3Q96JM7 780 aaPredicted RBP12.87□□□□□ -0.35
SRGAP2-210ENST00000604419 DICER1Q9UPY3 1922 aaKnown RBP12.87□□□□□ -0.35
SRGAP2-210ENST00000604419 DCTN1Q14203 1278 aa12.86□□□□□ -0.35
SRGAP2-210ENST00000604419 LDHDQ86WU2 507 aa12.86□□□□□ -0.35
SRGAP2-210ENST00000604419 NYXQ9GZU5 481 aa12.86□□□□□ -0.35
SRGAP2-210ENST00000604419 SLX4Q8IY92 1834 aa12.85□□□□□ -0.35
SRGAP2-210ENST00000604419 ERVV-1B6SEH8 477 aa12.85□□□□□ -0.35
SRGAP2-210ENST00000604419 HSPA1AP0DMV8 641 aaKnown RBP12.85□□□□□ -0.35
SRGAP2-210ENST00000604419 HSPA1BP0DMV9 641 aaKnown RBP12.85□□□□□ -0.35
SRGAP2-210ENST00000604419 PNNQ9H307 717 aaKnown RBP12.85□□□□□ -0.35
SRGAP2-210ENST00000604419 COL11A2P13942 1736 aaPredicted RBP12.85□□□□□ -0.35
SRGAP2-210ENST00000604419 GRIPAP1Q4V328 841 aa12.84□□□□□ -0.35
SRGAP2-210ENST00000604419 CC2D2BQ6DHV5 1058 aa12.84□□□□□ -0.35
SRGAP2-210ENST00000604419 TAF1DQ9H5J8 278 aaPredicted RBP12.84□□□□□ -0.35
SRGAP2-210ENST00000604419 BCORQ6W2J9 1755 aa12.84□□□□□ -0.35
SRGAP2-210ENST00000604419 FAM177BA6PVY3 158 aa12.83□□□□□ -0.36
SRGAP2-210ENST00000604419 HLFQ16534 295 aa12.83□□□□□ -0.36
SRGAP2-210ENST00000604419 PNMA8AQ86V59 439 aaPredicted RBP12.83□□□□□ -0.36
SRGAP2-210ENST00000604419 ZNF277Q9NRM2 450 aaPredicted RBP12.83□□□□□ -0.36
SRGAP2-210ENST00000604419 ARFGEF2Q9Y6D5 1785 aa12.82□□□□□ -0.36
SRGAP2-210ENST00000604419 POTEIP0CG38 1075 aa12.82□□□□□ -0.36
SRGAP2-210ENST00000604419 POTEJP0CG39 1038 aa12.82□□□□□ -0.36
SRGAP2-210ENST00000604419 IARSP41252 1262 aaKnown RBP12.82□□□□□ -0.36
SRGAP2-210ENST00000604419 CRY2Q49AN0 593 aa12.82□□□□□ -0.36
SRGAP2-210ENST00000604419 SYNE4Q8N205 404 aa12.82□□□□□ -0.36
SRGAP2-210ENST00000604419 JDP2Q8WYK2 163 aa12.82□□□□□ -0.36
SRGAP2-210ENST00000604419 PSMD1Q99460 953 aa12.82□□□□□ -0.36
SRGAP2-210ENST00000604419 MIS18AQ9NYP9 233 aa12.82□□□□□ -0.36
SRGAP2-210ENST00000604419 HACL1Q9UJ83 578 aa12.82□□□□□ -0.36
SRGAP2-210ENST00000604419 PASKQ96RG2 1323 aa12.82□□□□□ -0.36
SRGAP2-210ENST00000604419 FZD9O00144 591 aa12.81□□□□□ -0.36
SRGAP2-210ENST00000604419 EIF4A1P60842 406 aaKnown RBP12.81□□□□□ -0.36
SRGAP2-210ENST00000604419 KIF6Q6ZMV9 814 aa12.81□□□□□ -0.36
SRGAP2-210ENST00000604419 GPC2Q8N158 579 aa12.81□□□□□ -0.36
SRGAP2-210ENST00000604419 MKRN1Q9UHC7 482 aaKnown RBP12.81□□□□□ -0.36
SRGAP2-210ENST00000604419 CLEC11AQ9Y240 323 aa12.81□□□□□ -0.36
SRGAP2-210ENST00000604419 RRP7AQ9Y3A4 280 aaKnown RBP12.81□□□□□ -0.36
SRGAP2-210ENST00000604419 MAP3K15Q6ZN16 1313 aa12.81□□□□□ -0.36
SRGAP2-210ENST00000604419 TMEM88BA6NKF7 163 aa12.8□□□□□ -0.36
SRGAP2-210ENST00000604419 ITGBL1O95965 494 aaPredicted RBP12.8□□□□□ -0.36
SRGAP2-210ENST00000604419 HOXA10P31260 410 aaPredicted RBP12.8□□□□□ -0.36
SRGAP2-210ENST00000604419 EPHX2P34913 555 aa12.8□□□□□ -0.36
SRGAP2-210ENST00000604419 EAPPQ56P03 285 aaPredicted RBP12.8□□□□□ -0.36
SRGAP2-210ENST00000604419 NGEFQ8N5V2 710 aa12.8□□□□□ -0.36
SRGAP2-210ENST00000604419 SCN4AP35499 1836 aa12.8□□□□□ -0.36
SRGAP2-210ENST00000604419 EIF6P56537 245 aaKnown RBP12.79□□□□□ -0.36
SRGAP2-210ENST00000604419 NFE2L2Q16236 605 aa12.79□□□□□ -0.36
SRGAP2-210ENST00000604419 OLFM4Q6UX06 510 aa12.79□□□□□ -0.36
SRGAP2-210ENST00000604419 RPGRQ92834 1020 aaKnown RBP12.79□□□□□ -0.36
SRGAP2-210ENST00000604419 CRAMP1Q96RY5 1269 aa12.79□□□□□ -0.36
SRGAP2-210ENST00000604419 PLEKHF1Q96S99 279 aa12.79□□□□□ -0.36
SRGAP2-210ENST00000604419 ERBB4Q15303 1308 aa12.79□□□□□ -0.36
SRGAP2-210ENST00000604419 ZNF541Q9H0D2 1346 aa12.79□□□□□ -0.36
SRGAP2-210ENST00000604419 CNTNAP1P78357 1384 aa12.79□□□□□ -0.36
SRGAP2-210ENST00000604419 CAPN15O75808 1086 aa12.78□□□□□ -0.36
SRGAP2-210ENST00000604419 PPP1R42Q7Z4L9 355 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms