RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 HSP90AB3PQ58FF7 597 aa12.16□□□□□ -0.46
SQSTM1P1-201ENST00000603451 USPL1Q5W0Q7 1092 aa12.16□□□□□ -0.46
SQSTM1P1-201ENST00000603451 CDCA7LQ96GN5 454 aa12.16□□□□□ -0.46
SQSTM1P1-201ENST00000603451 PDGFDQ9GZP0 370 aaPredicted RBP12.16□□□□□ -0.46
SQSTM1P1-201ENST00000603451 ZNF330Q9Y3S2 320 aaPredicted RBP12.16□□□□□ -0.46
SQSTM1P1-201ENST00000603451 AFDNP55196 1824 aaKnown RBP12.16□□□□□ -0.46
SQSTM1P1-201ENST00000603451 RNF123Q5XPI4 1314 aa12.15□□□□□ -0.46
SQSTM1P1-201ENST00000603451 RIC1Q4ADV7 1423 aa12.15□□□□□ -0.46
SQSTM1P1-201ENST00000603451 ZBTB7AO95365 584 aa12.15□□□□□ -0.46
SQSTM1P1-201ENST00000603451 PTGER2P43116 358 aa12.15□□□□□ -0.46
SQSTM1P1-201ENST00000603451 GIGYF2Q6Y7W6 1299 aaKnown RBP12.15□□□□□ -0.46
SQSTM1P1-201ENST00000603451 PLBD2Q8NHP8 589 aa12.15□□□□□ -0.46
SQSTM1P1-201ENST00000603451 PXDNLA1KZ92 1463 aa12.14□□□□□ -0.47
SQSTM1P1-201ENST00000603451 BRPF1P55201 1214 aaPredicted RBP12.14□□□□□ -0.47
SQSTM1P1-201ENST00000603451 PROSER3Q2NL68 480 aa12.14□□□□□ -0.47
SQSTM1P1-201ENST00000603451 BCL2L12Q9HB09 334 aa12.14□□□□□ -0.47
SQSTM1P1-201ENST00000603451 SRP68Q9UHB9 627 aaKnown RBP12.14□□□□□ -0.47
SQSTM1P1-201ENST00000603451 TBC1D2BQ9UPU7 963 aa12.14□□□□□ -0.47
SQSTM1P1-201ENST00000603451 LAMB2P55268 1798 aa12.14□□□□□ -0.47
SQSTM1P1-201ENST00000603451 C10orf71Q711Q0 1435 aa12.13□□□□□ -0.47
SQSTM1P1-201ENST00000603451 DLEC1Q9Y238 1755 aa12.13□□□□□ -0.47
SQSTM1P1-201ENST00000603451 SLC4A2P04920 1241 aa12.13□□□□□ -0.47
SQSTM1P1-201ENST00000603451 TM4SF1P30408 202 aa12.13□□□□□ -0.47
SQSTM1P1-201ENST00000603451 PIP4K2AP48426 406 aaPredicted RBP12.13□□□□□ -0.47
SQSTM1P1-201ENST00000603451 PARP10Q53GL7 1025 aa12.13□□□□□ -0.47
SQSTM1P1-201ENST00000603451 COPS6Q7L5N1 327 aa12.13□□□□□ -0.47
SQSTM1P1-201ENST00000603451 XAGE3Q8WTP9 111 aa12.13□□□□□ -0.47
SQSTM1P1-201ENST00000603451 PARP3Q9Y6F1 533 aa12.13□□□□□ -0.47
SQSTM1P1-201ENST00000603451 PTPRCP08575 1304 aa12.12□□□□□ -0.47
SQSTM1P1-201ENST00000603451 KIF16BQ96L93 1317 aa12.12□□□□□ -0.47
SQSTM1P1-201ENST00000603451 MMP10P09238 476 aa12.12□□□□□ -0.47
SQSTM1P1-201ENST00000603451 FLIIQ13045 1269 aa12.12□□□□□ -0.47
SQSTM1P1-201ENST00000603451 FKBP8Q14318 412 aa12.12□□□□□ -0.47
SQSTM1P1-201ENST00000603451 TTLL7Q6ZT98 887 aa12.12□□□□□ -0.47
SQSTM1P1-201ENST00000603451 ANKRD13DQ6ZTN6 518 aa12.12□□□□□ -0.47
SQSTM1P1-201ENST00000603451 NECTIN2Q92692 538 aa12.12□□□□□ -0.47
SQSTM1P1-201ENST00000603451 ARXQ96QS3 562 aa12.12□□□□□ -0.47
SQSTM1P1-201ENST00000603451 POLRMTO00411 1230 aaKnown RBP12.11□□□□□ -0.47
SQSTM1P1-201ENST00000603451 TRIM28Q13263 835 aaKnown RBP12.11□□□□□ -0.47
SQSTM1P1-201ENST00000603451 NFIXQ14938 502 aa12.11□□□□□ -0.47
SQSTM1P1-201ENST00000603451 KSR2Q6VAB6 950 aa12.11□□□□□ -0.47
SQSTM1P1-201ENST00000603451 SMIM5Q71RC9 77 aa12.11□□□□□ -0.47
SQSTM1P1-201ENST00000603451 SETDB2Q96T68 719 aa12.11□□□□□ -0.47
SQSTM1P1-201ENST00000603451 NYXQ9GZU5 481 aa12.11□□□□□ -0.47
SQSTM1P1-201ENST00000603451 ZBTB3Q9H5J0 574 aa12.11□□□□□ -0.47
SQSTM1P1-201ENST00000603451 ATF5Q9Y2D1 282 aaPredicted RBP12.11□□□□□ -0.47
SQSTM1P1-201ENST00000603451 KIAA1551Q9HCM1 1747 aa12.11□□□□□ -0.47
SQSTM1P1-201ENST00000603451 ANXA1P04083 346 aa12.1□□□□□ -0.47
SQSTM1P1-201ENST00000603451 TBC1D9BQ66K14 1250 aa12.1□□□□□ -0.47
SQSTM1P1-201ENST00000603451 MSL1Q68DK7 614 aa12.1□□□□□ -0.47
SQSTM1P1-201ENST00000603451 ZNF34Q8IZ26 560 aa12.1□□□□□ -0.47
SQSTM1P1-201ENST00000603451 PHAXQ9H814 394 aaKnown RBP12.1□□□□□ -0.47
SQSTM1P1-201ENST00000603451 PPP1R1BQ9UD71 204 aaPredicted RBP12.1□□□□□ -0.47
SQSTM1P1-201ENST00000603451 PDZRN3Q9UPQ7 1066 aa12.1□□□□□ -0.47
SQSTM1P1-201ENST00000603451 NIP7Q9Y221 180 aaKnown RBP eCLIP12.1□□□□□ -0.47
SQSTM1P1-201ENST00000603451 CD2APQ9Y5K6 639 aa12.1□□□□□ -0.47
SQSTM1P1-201ENST00000603451 ADCY9O60503 1353 aa12.09□□□□□ -0.47
SQSTM1P1-201ENST00000603451 BRCA1P38398 1863 aaKnown RBP12.09□□□□□ -0.47
SQSTM1P1-201ENST00000603451 ANKRD31Q8N7Z5 1873 aa12.09□□□□□ -0.47
SQSTM1P1-201ENST00000603451 RARSP54136 660 aaKnown RBP12.09□□□□□ -0.47
SQSTM1P1-201ENST00000603451 DDR1Q08345 913 aa12.09□□□□□ -0.47
SQSTM1P1-201ENST00000603451 NEXNQ0ZGT2 675 aa12.09□□□□□ -0.47
SQSTM1P1-201ENST00000603451 AIMP1Q12904 312 aaKnown RBP12.09□□□□□ -0.47
SQSTM1P1-201ENST00000603451 FKBP5Q13451 457 aaPredicted RBP12.09□□□□□ -0.47
SQSTM1P1-201ENST00000603451 TCIRG1Q13488 830 aa12.09□□□□□ -0.47
SQSTM1P1-201ENST00000603451 PPP1R42Q7Z4L9 355 aa12.09□□□□□ -0.47
SQSTM1P1-201ENST00000603451 RIC3Q7Z5B4 369 aa12.09□□□□□ -0.47
SQSTM1P1-201ENST00000603451 SSH1Q8WYL5 1049 aa12.09□□□□□ -0.47
SQSTM1P1-201ENST00000603451 SMC4Q9NTJ3 1288 aa12.09□□□□□ -0.47
SQSTM1P1-201ENST00000603451 HSP90B1P14625 803 aaKnown RBP12.08□□□□□ -0.48
SQSTM1P1-201ENST00000603451 HLFQ16534 295 aa12.08□□□□□ -0.48
SQSTM1P1-201ENST00000603451 TPTE2Q6XPS3 522 aa12.08□□□□□ -0.48
SQSTM1P1-201ENST00000603451 MRPL50Q8N5N7 158 aaKnown RBP12.08□□□□□ -0.48
SQSTM1P1-201ENST00000603451 CNBD1Q8NA66 436 aa12.08□□□□□ -0.48
SQSTM1P1-201ENST00000603451 ARHGAP45Q92619 1136 aa12.08□□□□□ -0.48
SQSTM1P1-201ENST00000603451 METTL22Q9BUU2 404 aaPredicted RBP12.08□□□□□ -0.48
SQSTM1P1-201ENST00000603451 PI4KAP2A4QPH2 592 aa12.07□□□□□ -0.48
SQSTM1P1-201ENST00000603451 SERPINB2P05120 415 aa12.07□□□□□ -0.48
SQSTM1P1-201ENST00000603451 ST5P78524 1137 aa12.07□□□□□ -0.48
SQSTM1P1-201ENST00000603451 NBPF5PQ86XG9 351 aaPredicted RBP12.07□□□□□ -0.48
SQSTM1P1-201ENST00000603451 PI4KAP1Q8N8J0 262 aa12.07□□□□□ -0.48
SQSTM1P1-201ENST00000603451 CCDC191Q8NCU4 936 aa12.07□□□□□ -0.48
SQSTM1P1-201ENST00000603451 DNAAF4Q8WXU2 420 aa12.07□□□□□ -0.48
SQSTM1P1-201ENST00000603451 ISCA1Q9BUE6 129 aa12.07□□□□□ -0.48
SQSTM1P1-201ENST00000603451 UBN2Q6ZU65 1347 aa12.07□□□□□ -0.48
SQSTM1P1-201ENST00000603451 DDX60Q8IY21 1712 aaKnown RBP12.06□□□□□ -0.48
SQSTM1P1-201ENST00000603451 MYH3P11055 1940 aa12.06□□□□□ -0.48
SQSTM1P1-201ENST00000603451 IPO8O15397 1037 aaKnown RBP12.06□□□□□ -0.48
SQSTM1P1-201ENST00000603451 TGFB2P61812 414 aa12.06□□□□□ -0.48
SQSTM1P1-201ENST00000603451 NLRP10Q86W26 655 aa12.06□□□□□ -0.48
SQSTM1P1-201ENST00000603451 LINS1Q8NG48 757 aa12.06□□□□□ -0.48
SQSTM1P1-201ENST00000603451 BRIP1Q9BX63 1249 aa12.06□□□□□ -0.48
SQSTM1P1-201ENST00000603451 MAP3K2Q9Y2U5 619 aa12.06□□□□□ -0.48
SQSTM1P1-201ENST00000603451 COL11A2P13942 1736 aaPredicted RBP12.06□□□□□ -0.48
SQSTM1P1-201ENST00000603451 NTSR2O95665 410 aa12.05□□□□□ -0.48
SQSTM1P1-201ENST00000603451 PRR5LQ6MZQ0 368 aa12.05□□□□□ -0.48
SQSTM1P1-201ENST00000603451 G2E3Q7L622 706 aa12.05□□□□□ -0.48
SQSTM1P1-201ENST00000603451 API5Q9BZZ5 524 aaKnown RBP12.05□□□□□ -0.48
SQSTM1P1-201ENST00000603451 SH3TC1Q8TE82 1336 aa12.05□□□□□ -0.48
SQSTM1P1-201ENST00000603451 ARFGEF1Q9Y6D6 1849 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms