RNA–Protein interactions for RNA: ENST00000602998.1

SH3YL1-227, Transcript of SH3 and SYLF domain containing 1, humanhuman

Gene SH3YL1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-227ENST00000602998 OLFM4Q6UX06 510 aa13.36□□□□□ -0.27
SH3YL1-227ENST00000602998 PHACTR3Q96KR7 559 aa13.36□□□□□ -0.27
SH3YL1-227ENST00000602998 MKRN1Q9UHC7 482 aaKnown RBP13.36□□□□□ -0.27
SH3YL1-227ENST00000602998 USP16Q9Y5T5 823 aa13.36□□□□□ -0.27
SH3YL1-227ENST00000602998 BCORQ6W2J9 1755 aa13.35□□□□□ -0.27
SH3YL1-227ENST00000602998 A0A087WZG4 1122 aa13.35□□□□□ -0.27
SH3YL1-227ENST00000602998 PDE6BP35913 854 aa13.35□□□□□ -0.27
SH3YL1-227ENST00000602998 IL6STP40189 918 aaPredicted RBP13.35□□□□□ -0.27
SH3YL1-227ENST00000602998 DPY19L2Q6NUT2 758 aa13.35□□□□□ -0.27
SH3YL1-227ENST00000602998 PRPF40BQ6NWY9 871 aaKnown RBP13.35□□□□□ -0.27
SH3YL1-227ENST00000602998 GNAT3A8MTJ3 354 aa13.34□□□□□ -0.27
SH3YL1-227ENST00000602998 SRGNP10124 158 aa13.34□□□□□ -0.27
SH3YL1-227ENST00000602998 KCNA4P22459 653 aa13.34□□□□□ -0.27
SH3YL1-227ENST00000602998 TEFQ10587 303 aa13.34□□□□□ -0.27
SH3YL1-227ENST00000602998 SETDB2Q96T68 719 aa13.34□□□□□ -0.27
SH3YL1-227ENST00000602998 TAOK3Q9H2K8 898 aa13.34□□□□□ -0.27
SH3YL1-227ENST00000602998 ARFGEF2Q9Y6D5 1785 aa13.34□□□□□ -0.27
SH3YL1-227ENST00000602998 CHADLQ6NUI6 762 aa13.33□□□□□ -0.28
SH3YL1-227ENST00000602998 CNBD1Q8NA66 436 aa13.33□□□□□ -0.28
SH3YL1-227ENST00000602998 C7orf43Q8WVR3 580 aa13.33□□□□□ -0.28
SH3YL1-227ENST00000602998 CEMIPQ8WUJ3 1361 aa13.32□□□□□ -0.28
SH3YL1-227ENST00000602998 DZIP3Q86Y13 1208 aaKnown RBP13.32□□□□□ -0.28
SH3YL1-227ENST00000602998 FMNL2Q96PY5 1086 aa13.32□□□□□ -0.28
SH3YL1-227ENST00000602998 LTBP3Q9NS15 1303 aa13.32□□□□□ -0.28
SH3YL1-227ENST00000602998 BTBD11A6QL63 1104 aa13.31□□□□□ -0.28
SH3YL1-227ENST00000602998 STYK1Q6J9G0 422 aa13.31□□□□□ -0.28
SH3YL1-227ENST00000602998 SLC51AQ86UW1 340 aa13.31□□□□□ -0.28
SH3YL1-227ENST00000602998 GAS2L2Q8NHY3 880 aa13.31□□□□□ -0.28
SH3YL1-227ENST00000602998 CCER1Q8TC90 406 aaPredicted RBP13.31□□□□□ -0.28
SH3YL1-227ENST00000602998 CNKSR1Q969H4 720 aa13.31□□□□□ -0.28
SH3YL1-227ENST00000602998 MASTLQ96GX5 879 aa13.31□□□□□ -0.28
SH3YL1-227ENST00000602998 TEX13AQ9BXU3 409 aaPredicted RBP13.31□□□□□ -0.28
SH3YL1-227ENST00000602998 CREBZFQ9NS37 354 aa13.31□□□□□ -0.28
SH3YL1-227ENST00000602998 ZNF541Q9H0D2 1346 aa13.31□□□□□ -0.28
SH3YL1-227ENST00000602998 FAM177BA6PVY3 158 aa13.3□□□□□ -0.28
SH3YL1-227ENST00000602998 NBPF26B4DH59 902 aa13.3□□□□□ -0.28
SH3YL1-227ENST00000602998 FOXN1O15353 648 aa13.3□□□□□ -0.28
SH3YL1-227ENST00000602998 PRKAR2BP31323 418 aa13.3□□□□□ -0.28
SH3YL1-227ENST00000602998 DCTN1Q14203 1278 aa13.3□□□□□ -0.28
SH3YL1-227ENST00000602998 NBPF10Q6P3W6 841 aaKnown RBP13.3□□□□□ -0.28
SH3YL1-227ENST00000602998 NBPF15Q8N660 670 aa13.3□□□□□ -0.28
SH3YL1-227ENST00000602998 RSPH6AQ9H0K4 717 aa13.3□□□□□ -0.28
SH3YL1-227ENST00000602998 TAF1DQ9H5J8 278 aaPredicted RBP13.3□□□□□ -0.28
SH3YL1-227ENST00000602998 ZNF277Q9NRM2 450 aaPredicted RBP13.3□□□□□ -0.28
SH3YL1-227ENST00000602998 PASKQ96RG2 1323 aa13.3□□□□□ -0.28
SH3YL1-227ENST00000602998 SCN4AP35499 1836 aa13.29□□□□□ -0.28
SH3YL1-227ENST00000602998 NPHP1O15259 732 aa13.29□□□□□ -0.28
SH3YL1-227ENST00000602998 ST5P78524 1137 aa13.29□□□□□ -0.28
SH3YL1-227ENST00000602998 MCM10Q7L590 875 aa13.29□□□□□ -0.28
SH3YL1-227ENST00000602998 NBPF5PQ86XG9 351 aaPredicted RBP13.29□□□□□ -0.28
SH3YL1-227ENST00000602998 PDZRN3Q9UPQ7 1066 aa13.29□□□□□ -0.28
SH3YL1-227ENST00000602998 ITGBL1O95965 494 aaPredicted RBP13.28□□□□□ -0.28
SH3YL1-227ENST00000602998 VEGFBP49765 207 aa13.28□□□□□ -0.28
SH3YL1-227ENST00000602998 HLFQ16534 295 aa13.28□□□□□ -0.28
SH3YL1-227ENST00000602998 CNTNAP1P78357 1384 aa13.28□□□□□ -0.28
SH3YL1-227ENST00000602998 KLRG2A4D1S0 409 aaPredicted RBP13.27□□□□□ -0.29
SH3YL1-227ENST00000602998 EAPPQ56P03 285 aaPredicted RBP13.27□□□□□ -0.29
SH3YL1-227ENST00000602998 L3MBTL3Q96JM7 780 aaPredicted RBP13.27□□□□□ -0.29
SH3YL1-227ENST00000602998 MIS18AQ9NYP9 233 aa13.27□□□□□ -0.29
SH3YL1-227ENST00000602998 COL4A5P29400 1685 aa13.27□□□□□ -0.29
SH3YL1-227ENST00000602998 ADAMTSL1Q8N6G6 1762 aa13.27□□□□□ -0.29
SH3YL1-227ENST00000602998 FMR1Q06787 632 aaKnown RBP eCLIP13.26□□□□□ -0.29
SH3YL1-227ENST00000602998 CCDC93Q567U6 631 aa13.26□□□□□ -0.29
SH3YL1-227ENST00000602998 LDHDQ86WU2 507 aa13.26□□□□□ -0.29
SH3YL1-227ENST00000602998 NIP7Q9Y221 180 aaKnown RBP eCLIP13.26□□□□□ -0.29
SH3YL1-227ENST00000602998 NPC1L1Q9UHC9 1359 aa13.25□□□□□ -0.29
SH3YL1-227ENST00000602998 RNF123Q5XPI4 1314 aa13.25□□□□□ -0.29
SH3YL1-227ENST00000602998 NPR1P16066 1061 aa13.25□□□□□ -0.29
SH3YL1-227ENST00000602998 FKBP4Q02790 459 aaKnown RBP eCLIP13.25□□□□□ -0.29
SH3YL1-227ENST00000602998 MAP1SQ66K74 1059 aaPredicted RBP13.25□□□□□ -0.29
SH3YL1-227ENST00000602998 CLEC4GQ6UXB4 293 aa13.25□□□□□ -0.29
SH3YL1-227ENST00000602998 NPM2Q86SE8 214 aaKnown RBP13.25□□□□□ -0.29
SH3YL1-227ENST00000602998 LTBP1Q14766 1721 aa13.25□□□□□ -0.29
SH3YL1-227ENST00000602998 SNED1Q8TER0 1413 aa13.24□□□□□ -0.29
SH3YL1-227ENST00000602998 ABCC12Q96J65 1359 aa13.24□□□□□ -0.29
SH3YL1-227ENST00000602998 SNRPA1P09661 255 aaKnown RBP13.24□□□□□ -0.29
SH3YL1-227ENST00000602998 SYNE4Q8N205 404 aa13.24□□□□□ -0.29
SH3YL1-227ENST00000602998 CLEC11AQ9Y240 323 aa13.24□□□□□ -0.29
SH3YL1-227ENST00000602998 NUP98P52948 1817 aa13.24□□□□□ -0.29
SH3YL1-227ENST00000602998 IQCA1LA6NCM1 817 aa13.23□□□□□ -0.29
SH3YL1-227ENST00000602998 TMEM88BA6NKF7 163 aa13.23□□□□□ -0.29
SH3YL1-227ENST00000602998 EPHX2P34913 555 aa13.23□□□□□ -0.29
SH3YL1-227ENST00000602998 SOGA3Q5TF21 947 aa13.23□□□□□ -0.29
SH3YL1-227ENST00000602998 NUTM1Q86Y26 1132 aa13.23□□□□□ -0.29
SH3YL1-227ENST00000602998 NGEFQ8N5V2 710 aa13.23□□□□□ -0.29
SH3YL1-227ENST00000602998 DLG5Q8TDM6 1919 aa13.22□□□□□ -0.29
SH3YL1-227ENST00000602998 FZD9O00144 591 aa13.22□□□□□ -0.29
SH3YL1-227ENST00000602998 U2AF1L5P0DN76 240 aaPredicted RBP13.22□□□□□ -0.29
SH3YL1-227ENST00000602998 IARSP41252 1262 aaKnown RBP13.22□□□□□ -0.29
SH3YL1-227ENST00000602998 LBX1P52954 281 aa13.22□□□□□ -0.29
SH3YL1-227ENST00000602998 U2AF1Q01081 240 aaKnown RBP eCLIP13.22□□□□□ -0.29
SH3YL1-227ENST00000602998 TPTE2Q6XPS3 522 aa13.22□□□□□ -0.29
SH3YL1-227ENST00000602998 WBP1LQ9NX94 342 aa13.22□□□□□ -0.29
SH3YL1-227ENST00000602998 HACL1Q9UJ83 578 aa13.22□□□□□ -0.29
SH3YL1-227ENST00000602998 TTLL7Q6ZT98 887 aa13.21□□□□□ -0.29
SH3YL1-227ENST00000602998 CNTROBQ8N137 903 aa13.21□□□□□ -0.29
SH3YL1-227ENST00000602998 ZNF652Q9Y2D9 606 aa13.21□□□□□ -0.29
SH3YL1-227ENST00000602998 SLC4A2P04920 1241 aa13.2□□□□□ -0.3
SH3YL1-227ENST00000602998 PPP2R1AP30153 589 aa13.2□□□□□ -0.3
SH3YL1-227ENST00000602998 C3orf67Q6ZVT6 689 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 297.5 ms