RNA–Protein interactions for RNA: ENST00000602897.1

PPFIA3-212, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 1,615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-212ENST00000602897 FLAD1Q8NFF5 587 aa28.02■■■□□ 2.08
PPFIA3-212ENST00000602897 ZNF496Q96IT1 587 aaPredicted RBP28.02■■■□□ 2.08
PPFIA3-212ENST00000602897 DDX21Q9NR30 783 aaKnown RBP eCLIP28.02■■■□□ 2.08
PPFIA3-212ENST00000602897 N4BP2Q86UW6 1770 aaPredicted RBP28.01■■■□□ 2.07
PPFIA3-212ENST00000602897 SMC5Q8IY18 1101 aa28.01■■■□□ 2.07
PPFIA3-212ENST00000602897 SLC4A10Q6U841 1118 aa28■■■□□ 2.07
PPFIA3-212ENST00000602897 RPAP2Q8IXW5 612 aaPredicted RBP28■■■□□ 2.07
PPFIA3-212ENST00000602897 SGIP1Q9BQI5 828 aa28■■■□□ 2.07
PPFIA3-212ENST00000602897 F6X3S4 739 aa28■■■□□ 2.07
PPFIA3-212ENST00000602897 PHAXQ9H814 394 aaKnown RBP28■■■□□ 2.07
PPFIA3-212ENST00000602897 GNPATO15228 680 aa27.98■■■□□ 2.07
PPFIA3-212ENST00000602897 PHF14O94880 888 aa27.98■■■□□ 2.07
PPFIA3-212ENST00000602897 GNAI3P08754 354 aa27.98■■■□□ 2.07
PPFIA3-212ENST00000602897 AMIGO3Q86WK7 504 aa27.98■■■□□ 2.07
PPFIA3-212ENST00000602897 GCC1Q96CN9 775 aa27.98■■■□□ 2.07
PPFIA3-212ENST00000602897 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.96■■■□□ 2.07
PPFIA3-212ENST00000602897 SMIM5Q71RC9 77 aa27.96■■■□□ 2.07
PPFIA3-212ENST00000602897 ERBB4Q15303 1308 aa27.96■■■□□ 2.07
PPFIA3-212ENST00000602897 UBR2Q8IWV8 1755 aa27.95■■■□□ 2.07
PPFIA3-212ENST00000602897 ZNF831Q5JPB2 1677 aa27.95■■■□□ 2.07
PPFIA3-212ENST00000602897 DDX58O95786 925 aaKnown RBP27.95■■■□□ 2.06
PPFIA3-212ENST00000602897 SSFA2P28290 1259 aa27.95■■■□□ 2.06
PPFIA3-212ENST00000602897 POLD1P28340 1107 aa27.95■■■□□ 2.06
PPFIA3-212ENST00000602897 ARXQ96QS3 562 aa27.95■■■□□ 2.06
PPFIA3-212ENST00000602897 PDZRN3Q9UPQ7 1066 aa27.95■■■□□ 2.06
PPFIA3-212ENST00000602897 ATP10DQ9P241 1426 aa27.94■■■□□ 2.06
PPFIA3-212ENST00000602897 PRAMEF22A3QJZ6 481 aa27.94■■■□□ 2.06
PPFIA3-212ENST00000602897 PDIA6Q15084 440 aa27.94■■■□□ 2.06
PPFIA3-212ENST00000602897 ANKRD44Q8N8A2 993 aa27.94■■■□□ 2.06
PPFIA3-212ENST00000602897 DNAAF4Q8WXU2 420 aa27.94■■■□□ 2.06
PPFIA3-212ENST00000602897 KSR2Q6VAB6 950 aa27.93■■■□□ 2.06
PPFIA3-212ENST00000602897 MEIS3Q99687 375 aa27.93■■■□□ 2.06
PPFIA3-212ENST00000602897 RC3H1Q5TC82 1133 aaKnown RBP27.92■■■□□ 2.06
PPFIA3-212ENST00000602897 SRCIN1Q9C0H9 1055 aa27.92■■■□□ 2.06
PPFIA3-212ENST00000602897 CNTNAP4Q9C0A0 1308 aa27.92■■■□□ 2.06
PPFIA3-212ENST00000602897 PI4KAP2A4QPH2 592 aa27.92■■■□□ 2.06
PPFIA3-212ENST00000602897 MSL1Q68DK7 614 aa27.92■■■□□ 2.06
PPFIA3-212ENST00000602897 PI4KAP1Q8N8J0 262 aa27.92■■■□□ 2.06
PPFIA3-212ENST00000602897 C1orf115Q9H7X2 142 aa27.92■■■□□ 2.06
PPFIA3-212ENST00000602897 RTCBQ9Y3I0 505 aaKnown RBP27.92■■■□□ 2.06
PPFIA3-212ENST00000602897 LAMB4A4D0S4 1761 aa27.92■■■□□ 2.06
PPFIA3-212ENST00000602897 UBR3Q6ZT12 1888 aa27.91■■■□□ 2.06
PPFIA3-212ENST00000602897 GNAI2P04899 355 aa27.91■■■□□ 2.06
PPFIA3-212ENST00000602897 SIRT2Q8IXJ6 389 aa27.91■■■□□ 2.06
PPFIA3-212ENST00000602897 RBM19Q9Y4C8 960 aaKnown RBP27.91■■■□□ 2.06
PPFIA3-212ENST00000602897 IBTKQ9P2D0 1353 aaPredicted RBP27.9■■■□□ 2.06
PPFIA3-212ENST00000602897 FHDC1Q9C0D6 1143 aaPredicted RBP27.9■■■□□ 2.06
PPFIA3-212ENST00000602897 KCPQ6ZWJ8 1503 aa27.9■■■□□ 2.06
PPFIA3-212ENST00000602897 ADCY9O60503 1353 aa27.89■■■□□ 2.06
PPFIA3-212ENST00000602897 ALDH1L1O75891 902 aa27.89■■■□□ 2.06
PPFIA3-212ENST00000602897 PROSER3Q2NL68 480 aa27.89■■■□□ 2.06
PPFIA3-212ENST00000602897 TEX13AQ9BXU3 409 aaPredicted RBP27.89■■■□□ 2.06
PPFIA3-212ENST00000602897 USP16Q9Y5T5 823 aa27.89■■■□□ 2.06
PPFIA3-212ENST00000602897 CRKLP46109 303 aaKnown RBP27.89■■■□□ 2.05
PPFIA3-212ENST00000602897 RGS3P49796 1198 aa27.89■■■□□ 2.05
PPFIA3-212ENST00000602897 BEND3Q5T5X7 828 aa27.89■■■□□ 2.05
PPFIA3-212ENST00000602897 CEP85Q6P2H3 762 aa27.89■■■□□ 2.05
PPFIA3-212ENST00000602897 DNAJC10Q8IXB1 793 aa27.89■■■□□ 2.05
PPFIA3-212ENST00000602897 VSIG10Q8N0Z9 540 aa27.89■■■□□ 2.05
PPFIA3-212ENST00000602897 HMMRO75330 724 aa27.88■■■□□ 2.05
PPFIA3-212ENST00000602897 COL5A3P25940 1745 aaPredicted RBP27.88■■■□□ 2.05
PPFIA3-212ENST00000602897 NUCB1Q02818 461 aa27.88■■■□□ 2.05
PPFIA3-212ENST00000602897 RPS6KA4O75676 772 aa27.87■■■□□ 2.05
PPFIA3-212ENST00000602897 ANXA1P04083 346 aa27.87■■■□□ 2.05
PPFIA3-212ENST00000602897 TRAPPC3LQ5T215 181 aa27.87■■■□□ 2.05
PPFIA3-212ENST00000602897 SKAP1Q86WV1 359 aa27.87■■■□□ 2.05
PPFIA3-212ENST00000602897 HDAC5Q9UQL6 1122 aa27.87■■■□□ 2.05
PPFIA3-212ENST00000602897 PDE4AP27815 886 aa27.86■■■□□ 2.05
PPFIA3-212ENST00000602897 USP44Q9H0E7 712 aa27.86■■■□□ 2.05
PPFIA3-212ENST00000602897 DCTPP1Q9H773 170 aa27.86■■■□□ 2.05
PPFIA3-212ENST00000602897 SYT17Q9BSW7 474 aa27.85■■■□□ 2.05
PPFIA3-212ENST00000602897 BACH2Q9BYV9 841 aa27.85■■■□□ 2.05
PPFIA3-212ENST00000602897 MAP3K2Q9Y2U5 619 aa27.85■■■□□ 2.05
PPFIA3-212ENST00000602897 TJP1Q07157 1748 aa27.84■■■□□ 2.05
PPFIA3-212ENST00000602897 COL24A1Q17RW2 1714 aa27.84■■■□□ 2.05
PPFIA3-212ENST00000602897 ADRA2BP18089 450 aa27.84■■■□□ 2.05
PPFIA3-212ENST00000602897 LRP10Q7Z4F1 713 aa27.84■■■□□ 2.05
PPFIA3-212ENST00000602897 KLHL34Q8N239 644 aa27.84■■■□□ 2.05
PPFIA3-212ENST00000602897 CICQ96RK0 1608 aaPredicted RBP27.83■■■□□ 2.05
PPFIA3-212ENST00000602897 UBTFL1P0CB47 393 aaPredicted RBP27.83■■■□□ 2.05
PPFIA3-212ENST00000602897 LINS1Q8NG48 757 aa27.82■■■□□ 2.04
PPFIA3-212ENST00000602897 ARHGEF1Q92888 912 aaKnown RBP27.82■■■□□ 2.04
PPFIA3-212ENST00000602897 CYP19A1P11511 503 aaPredicted RBP27.81■■■□□ 2.04
PPFIA3-212ENST00000602897 FAM161AQ3B820 660 aa27.81■■■□□ 2.04
PPFIA3-212ENST00000602897 INTS5Q6P9B9 1019 aaKnown RBP27.81■■■□□ 2.04
PPFIA3-212ENST00000602897 CHD1LQ86WJ1 897 aa27.81■■■□□ 2.04
PPFIA3-212ENST00000602897 CCDC87Q9NVE4 849 aa27.81■■■□□ 2.04
PPFIA3-212ENST00000602897 MYL6BP14649 208 aa27.81■■■□□ 2.04
PPFIA3-212ENST00000602897 RFC4P35249 363 aa27.81■■■□□ 2.04
PPFIA3-212ENST00000602897 XAGE3Q8WTP9 111 aa27.81■■■□□ 2.04
PPFIA3-212ENST00000602897 MYH14Q7Z406 1995 aaKnown RBP27.8■■■□□ 2.04
PPFIA3-212ENST00000602897 ATP8B2P98198 1209 aa27.8■■■□□ 2.04
PPFIA3-212ENST00000602897 COPS6Q7L5N1 327 aa27.8■■■□□ 2.04
PPFIA3-212ENST00000602897 RIC3Q7Z5B4 369 aa27.8■■■□□ 2.04
PPFIA3-212ENST00000602897 ANKRD13DQ6ZTN6 518 aa27.79■■■□□ 2.04
PPFIA3-212ENST00000602897 NEXNQ0ZGT2 675 aa27.78■■■□□ 2.04
PPFIA3-212ENST00000602897 AIMP1Q12904 312 aaKnown RBP27.78■■■□□ 2.04
PPFIA3-212ENST00000602897 DCAF8L1A6NGE4 600 aa27.77■■■□□ 2.04
PPFIA3-212ENST00000602897 STARD3NLO95772 234 aa27.77■■■□□ 2.04
PPFIA3-212ENST00000602897 ANKRD45Q5TZF3 282 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms