RNA–Protein interactions for RNA: ENST00000601361.1

FARP1-234, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 2

Gene FARP1, Length 457 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-234ENST00000601361 SCN7AQ01118 1682 aa11.98□□□□□ -0.49
FARP1-234ENST00000601361 ZC3H4Q9UPT8 1303 aaKnown RBP11.98□□□□□ -0.49
FARP1-234ENST00000601361 PNISRQ8TF01 805 aaKnown RBP11.98□□□□□ -0.49
FARP1-234ENST00000601361 MIS18AQ9NYP9 233 aa11.98□□□□□ -0.49
FARP1-234ENST00000601361 MYBBP1AQ9BQG0 1328 aaKnown RBP11.97□□□□□ -0.49
FARP1-234ENST00000601361 PIP4K2AP48426 406 aaPredicted RBP11.97□□□□□ -0.49
FARP1-234ENST00000601361 WDR43Q15061 677 aaKnown RBP eCLIP11.97□□□□□ -0.49
FARP1-234ENST00000601361 DZIP3Q86Y13 1208 aaKnown RBP11.97□□□□□ -0.49
FARP1-234ENST00000601361 BCL2L12Q9HB09 334 aa11.97□□□□□ -0.49
FARP1-234ENST00000601361 RNF216Q9NWF9 866 aaPredicted RBP11.97□□□□□ -0.49
FARP1-234ENST00000601361 USP16Q9Y5T5 823 aa11.97□□□□□ -0.49
FARP1-234ENST00000601361 CARMIL3Q8ND23 1372 aa11.96□□□□□ -0.49
FARP1-234ENST00000601361 PRAMEF22A3QJZ6 481 aa11.96□□□□□ -0.49
FARP1-234ENST00000601361 H0YIN7 160 aa11.96□□□□□ -0.49
FARP1-234ENST00000601361 TBC1D9BQ66K14 1250 aa11.96□□□□□ -0.49
FARP1-234ENST00000601361 C2CD5Q86YS7 1000 aa11.96□□□□□ -0.49
FARP1-234ENST00000601361 PLEKHF1Q96S99 279 aa11.96□□□□□ -0.49
FARP1-234ENST00000601361 SETDB2Q96T68 719 aa11.96□□□□□ -0.49
FARP1-234ENST00000601361 ZNF652Q9Y2D9 606 aa11.96□□□□□ -0.49
FARP1-234ENST00000601361 SCN4AP35499 1836 aa11.95□□□□□ -0.5
FARP1-234ENST00000601361 THUMPD2Q9BTF0 503 aaKnown RBP11.95□□□□□ -0.5
FARP1-234ENST00000601361 LAMB4A4D0S4 1761 aa11.95□□□□□ -0.5
FARP1-234ENST00000601361 TNRC18O15417 2968 aaPredicted RBP11.94□□□□□ -0.5
FARP1-234ENST00000601361 PDE6BP35913 854 aa11.94□□□□□ -0.5
FARP1-234ENST00000601361 RIPK4P57078 832 aa11.94□□□□□ -0.5
FARP1-234ENST00000601361 ST5P78524 1137 aa11.94□□□□□ -0.5
FARP1-234ENST00000601361 LMOD3Q0VAK6 560 aa11.94□□□□□ -0.5
FARP1-234ENST00000601361 CNBD1Q8NA66 436 aa11.94□□□□□ -0.5
FARP1-234ENST00000601361 BCORQ6W2J9 1755 aa11.94□□□□□ -0.5
FARP1-234ENST00000601361 KDM3BQ7LBC6 1761 aa11.94□□□□□ -0.5
FARP1-234ENST00000601361 PDE4DIPQ5VU43 2346 aa11.93□□□□□ -0.5
FARP1-234ENST00000601361 CAMTA2O94983 1202 aa11.93□□□□□ -0.5
FARP1-234ENST00000601361 RASSF7Q02833 373 aa11.93□□□□□ -0.5
FARP1-234ENST00000601361 NEUROD2Q15784 382 aa11.93□□□□□ -0.5
FARP1-234ENST00000601361 CCDC146Q8IYE0 955 aa11.93□□□□□ -0.5
FARP1-234ENST00000601361 CCDC24Q8N4L8 307 aa11.93□□□□□ -0.5
FARP1-234ENST00000601361 NGEFQ8N5V2 710 aa11.93□□□□□ -0.5
FARP1-234ENST00000601361 TTLL6Q8N841 843 aa11.93□□□□□ -0.5
FARP1-234ENST00000601361 ZNF622Q969S3 477 aaKnown RBP eCLIP11.93□□□□□ -0.5
FARP1-234ENST00000601361 TSPYL4Q9UJ04 414 aa11.93□□□□□ -0.5
FARP1-234ENST00000601361 GLTPD2A6NH11 291 aa11.92□□□□□ -0.5
FARP1-234ENST00000601361 POTECB2RU33 542 aa11.92□□□□□ -0.5
FARP1-234ENST00000601361 VEGFAP15692 232 aaPredicted RBP11.92□□□□□ -0.5
FARP1-234ENST00000601361 PRR5LQ6MZQ0 368 aa11.92□□□□□ -0.5
FARP1-234ENST00000601361 NBPF5PQ86XG9 351 aaPredicted RBP11.92□□□□□ -0.5
FARP1-234ENST00000601361 BRIP1Q9BX63 1249 aa11.92□□□□□ -0.5
FARP1-234ENST00000601361 PDZRN3Q9UPQ7 1066 aa11.92□□□□□ -0.5
FARP1-234ENST00000601361 RRP7AQ9Y3A4 280 aaKnown RBP11.92□□□□□ -0.5
FARP1-234ENST00000601361 ADAMTSL1Q8N6G6 1762 aa11.92□□□□□ -0.5
FARP1-234ENST00000601361 FAM177BA6PVY3 158 aa11.91□□□□□ -0.5
FARP1-234ENST00000601361 NBPF26B4DH59 902 aa11.91□□□□□ -0.5
FARP1-234ENST00000601361 MYL6BP14649 208 aa11.91□□□□□ -0.5
FARP1-234ENST00000601361 GTF2E1P29083 439 aaPredicted RBP11.91□□□□□ -0.5
FARP1-234ENST00000601361 ZEB1P37275 1124 aaPredicted RBP11.91□□□□□ -0.5
FARP1-234ENST00000601361 EIF4A1P60842 406 aaKnown RBP11.91□□□□□ -0.5
FARP1-234ENST00000601361 NBPF10Q6P3W6 841 aaKnown RBP11.91□□□□□ -0.5
FARP1-234ENST00000601361 CLEC4GQ6UXB4 293 aa11.91□□□□□ -0.5
FARP1-234ENST00000601361 KIF6Q6ZMV9 814 aa11.91□□□□□ -0.5
FARP1-234ENST00000601361 NBPF15Q8N660 670 aa11.91□□□□□ -0.5
FARP1-234ENST00000601361 ZNF219Q9P2Y4 722 aaPredicted RBP11.91□□□□□ -0.5
FARP1-234ENST00000601361 SLX4Q8IY92 1834 aa11.9□□□□□ -0.5
FARP1-234ENST00000601361 THSD7BQ9C0I4 1608 aa11.9□□□□□ -0.5
FARP1-234ENST00000601361 LMNB1P20700 586 aa11.9□□□□□ -0.5
FARP1-234ENST00000601361 TMPOP42166 694 aaKnown RBP11.9□□□□□ -0.5
FARP1-234ENST00000601361 RUNDC1Q96C34 613 aa11.9□□□□□ -0.5
FARP1-234ENST00000601361 NIP7Q9Y221 180 aaKnown RBP eCLIP11.9□□□□□ -0.5
FARP1-234ENST00000601361 LAS1LQ9Y4W2 734 aaKnown RBP11.9□□□□□ -0.5
FARP1-234ENST00000601361 TPTE2Q6XPS3 522 aa11.89□□□□□ -0.51
FARP1-234ENST00000601361 PRKRIP1Q9H875 184 aaPredicted RBP11.89□□□□□ -0.51
FARP1-234ENST00000601361 NFKBIEO00221 500 aa11.88□□□□□ -0.51
FARP1-234ENST00000601361 FOXN1O15353 648 aa11.88□□□□□ -0.51
FARP1-234ENST00000601361 EIF2S2P20042 333 aaKnown RBP11.88□□□□□ -0.51
FARP1-234ENST00000601361 PRDM10Q9NQV6 1147 aa11.88□□□□□ -0.51
FARP1-234ENST00000601361 TRPM7Q96QT4 1865 aa11.87□□□□□ -0.51
FARP1-234ENST00000601361 C21orf2O43822 256 aa11.87□□□□□ -0.51
FARP1-234ENST00000601361 HLFQ16534 295 aa11.87□□□□□ -0.51
FARP1-234ENST00000601361 CNKSR1Q969H4 720 aa11.87□□□□□ -0.51
FARP1-234ENST00000601361 ZBTB3Q9H5J0 574 aa11.87□□□□□ -0.51
FARP1-234ENST00000601361 CREBZFQ9NS37 354 aa11.87□□□□□ -0.51
FARP1-234ENST00000601361 BABAM1Q9NWV8 329 aa11.87□□□□□ -0.51
FARP1-234ENST00000601361 ADAMTS8Q9UP79 889 aa11.87□□□□□ -0.51
FARP1-234ENST00000601361 CNTNAP1P78357 1384 aa11.87□□□□□ -0.51
FARP1-234ENST00000601361 RGL2O15211 777 aa11.86□□□□□ -0.51
FARP1-234ENST00000601361 STYK1Q6J9G0 422 aa11.86□□□□□ -0.51
FARP1-234ENST00000601361 MASTLQ96GX5 879 aa11.86□□□□□ -0.51
FARP1-234ENST00000601361 NYXQ9GZU5 481 aa11.86□□□□□ -0.51
FARP1-234ENST00000601361 ERBB4Q15303 1308 aa11.86□□□□□ -0.51
FARP1-234ENST00000601361 MAP3K15Q6ZN16 1313 aa11.86□□□□□ -0.51
FARP1-234ENST00000601361 ERVV-1B6SEH8 477 aa11.85□□□□□ -0.51
FARP1-234ENST00000601361 SRGNP10124 158 aa11.85□□□□□ -0.51
FARP1-234ENST00000601361 GPTP24298 496 aa11.85□□□□□ -0.51
FARP1-234ENST00000601361 SOGA3Q5TF21 947 aa11.85□□□□□ -0.51
FARP1-234ENST00000601361 TTLL7Q6ZT98 887 aa11.85□□□□□ -0.51
FARP1-234ENST00000601361 NECTIN2Q92692 538 aa11.85□□□□□ -0.51
FARP1-234ENST00000601361 MKRN1Q9UHC7 482 aaKnown RBP11.85□□□□□ -0.51
FARP1-234ENST00000601361 NUP98P52948 1817 aa11.84□□□□□ -0.51
FARP1-234ENST00000601361 NPM3O75607 178 aaKnown RBP11.84□□□□□ -0.51
FARP1-234ENST00000601361 NPR1P16066 1061 aa11.84□□□□□ -0.51
FARP1-234ENST00000601361 PRPF40BQ6NWY9 871 aaKnown RBP11.84□□□□□ -0.51
FARP1-234ENST00000601361 PASKQ96RG2 1323 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms