RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 TTLL7Q6ZT98 887 aa28.42■■■□□ 2.14
IRF3-228ENST00000601291 LINS1Q8NG48 757 aa28.42■■■□□ 2.14
IRF3-228ENST00000601291 MEIS3Q99687 375 aa28.41■■■□□ 2.14
IRF3-228ENST00000601291 GNAI3P08754 354 aa28.41■■■□□ 2.14
IRF3-228ENST00000601291 LINC00116Q8NCU8 138 aa28.41■■■□□ 2.14
IRF3-228ENST00000601291 CNTNAP4Q9C0A0 1308 aa28.4■■■□□ 2.14
IRF3-228ENST00000601291 PCDHB15Q9Y5E8 787 aa28.4■■■□□ 2.14
IRF3-228ENST00000601291 NUP188Q5SRE5 1749 aa28.39■■■□□ 2.14
IRF3-228ENST00000601291 MYD88Q99836 296 aa28.39■■■□□ 2.14
IRF3-228ENST00000601291 ZBTB3Q9H5J0 574 aa28.38■■■□□ 2.13
IRF3-228ENST00000601291 IBTKQ9P2D0 1353 aaPredicted RBP28.37■■■□□ 2.13
IRF3-228ENST00000601291 EIF5P55010 431 aaKnown RBP28.37■■■□□ 2.13
IRF3-228ENST00000601291 KCNQ4P56696 695 aa28.37■■■□□ 2.13
IRF3-228ENST00000601291 SLC27A3Q5K4L6 730 aa28.37■■■□□ 2.13
IRF3-228ENST00000601291 RC3H1Q5TC82 1133 aaKnown RBP28.37■■■□□ 2.13
IRF3-228ENST00000601291 ARXQ96QS3 562 aa28.37■■■□□ 2.13
IRF3-228ENST00000601291 C1orf115Q9H7X2 142 aa28.37■■■□□ 2.13
IRF3-228ENST00000601291 HMGB2P26583 209 aaKnown RBP28.36■■■□□ 2.13
IRF3-228ENST00000601291 CWF19L2Q2TBE0 894 aaKnown RBP28.36■■■□□ 2.13
IRF3-228ENST00000601291 CENPQQ7L2Z9 268 aaPredicted RBP28.36■■■□□ 2.13
IRF3-228ENST00000601291 RWDD1Q9H446 243 aaPredicted RBP28.36■■■□□ 2.13
IRF3-228ENST00000601291 MAP3K15Q6ZN16 1313 aa28.35■■■□□ 2.13
IRF3-228ENST00000601291 UBTFL1P0CB47 393 aaPredicted RBP28.35■■■□□ 2.13
IRF3-228ENST00000601291 USP44Q9H0E7 712 aa28.35■■■□□ 2.13
IRF3-228ENST00000601291 GNAI2P04899 355 aa28.34■■■□□ 2.13
IRF3-228ENST00000601291 DZIP3Q86Y13 1208 aaKnown RBP28.34■■■□□ 2.13
IRF3-228ENST00000601291 NEURL1BA8MQ27 555 aa28.33■■■□□ 2.13
IRF3-228ENST00000601291 IGKV5-2P06315 115 aa28.33■■■□□ 2.13
IRF3-228ENST00000601291 C9orf78Q9NZ63 289 aaPredicted RBP28.33■■■□□ 2.13
IRF3-228ENST00000601291 KDM2BQ8NHM5 1336 aa28.33■■■□□ 2.13
IRF3-228ENST00000601291 COL15A1P39059 1388 aa28.33■■■□□ 2.13
IRF3-228ENST00000601291 HDAC5Q9UQL6 1122 aa28.33■■■□□ 2.12
IRF3-228ENST00000601291 TAF1LQ8IZX4 1826 aa28.32■■■□□ 2.12
IRF3-228ENST00000601291 MYH14Q7Z406 1995 aaKnown RBP28.32■■■□□ 2.12
IRF3-228ENST00000601291 A0A087WZG4 1122 aa28.32■■■□□ 2.12
IRF3-228ENST00000601291 ERVV-1B6SEH8 477 aa28.32■■■□□ 2.12
IRF3-228ENST00000601291 APBA3O96018 575 aa28.32■■■□□ 2.12
IRF3-228ENST00000601291 HDAC1Q13547 482 aaPredicted RBP28.32■■■□□ 2.12
IRF3-228ENST00000601291 PLSCR1O15162 318 aa28.31■■■□□ 2.12
IRF3-228ENST00000601291 HSP90AB3PQ58FF7 597 aa28.31■■■□□ 2.12
IRF3-228ENST00000601291 C4BP0C0L5 1744 aa28.3■■■□□ 2.12
IRF3-228ENST00000601291 GRM8O00222 908 aa28.3■■■□□ 2.12
IRF3-228ENST00000601291 IGHDP01880 384 aa28.3■■■□□ 2.12
IRF3-228ENST00000601291 GIGYF2Q6Y7W6 1299 aaKnown RBP28.3■■■□□ 2.12
IRF3-228ENST00000601291 RPAP2Q8IXW5 612 aaPredicted RBP28.3■■■□□ 2.12
IRF3-228ENST00000601291 TNS1Q9HBL0 1735 aaKnown RBP28.3■■■□□ 2.12
IRF3-228ENST00000601291 GCKRQ14397 625 aa28.29■■■□□ 2.12
IRF3-228ENST00000601291 TBC1D2BQ9UPU7 963 aa28.29■■■□□ 2.12
IRF3-228ENST00000601291 AFDNP55196 1824 aaKnown RBP28.29■■■□□ 2.12
IRF3-228ENST00000601291 ATP5J2-PTCD1G3V325 749 aa28.28■■■□□ 2.12
IRF3-228ENST00000601291 RPS6KA4O75676 772 aa28.28■■■□□ 2.12
IRF3-228ENST00000601291 TCIRG1Q13488 830 aa28.28■■■□□ 2.12
IRF3-228ENST00000601291 LRRC4BQ9NT99 713 aa28.28■■■□□ 2.12
IRF3-228ENST00000601291 UTYO14607 1347 aa28.28■■■□□ 2.12
IRF3-228ENST00000601291 GNPATO15228 680 aa28.28■■■□□ 2.12
IRF3-228ENST00000601291 NBPF7P0C2Y1 421 aaPredicted RBP28.28■■■□□ 2.12
IRF3-228ENST00000601291 TXNRD1Q16881 649 aa28.28■■■□□ 2.12
IRF3-228ENST00000601291 AK7Q96M32 723 aa28.28■■■□□ 2.12
IRF3-228ENST00000601291 CEP85Q6P2H3 762 aa28.27■■■□□ 2.12
IRF3-228ENST00000601291 ANKRD44Q8N8A2 993 aa28.27■■■□□ 2.12
IRF3-228ENST00000601291 CWC25Q9NXE8 425 aaPredicted RBP28.27■■■□□ 2.12
IRF3-228ENST00000601291 RTCBQ9Y3I0 505 aaKnown RBP28.27■■■□□ 2.12
IRF3-228ENST00000601291 LRRFIP2Q9Y608 721 aaKnown RBP28.27■■■□□ 2.12
IRF3-228ENST00000601291 CCDC191Q8NCU4 936 aa28.26■■■□□ 2.11
IRF3-228ENST00000601291 ISCA1Q9BUE6 129 aa28.25■■■□□ 2.11
IRF3-228ENST00000601291 RGPD3A6NKT7 1758 aaPredicted RBP28.25■■■□□ 2.11
IRF3-228ENST00000601291 RGPD4Q7Z3J3 1758 aa28.25■■■□□ 2.11
IRF3-228ENST00000601291 HLFQ16534 295 aa28.24■■■□□ 2.11
IRF3-228ENST00000601291 HMMRO75330 724 aa28.24■■■□□ 2.11
IRF3-228ENST00000601291 TRIM28Q13263 835 aaKnown RBP28.24■■■□□ 2.11
IRF3-228ENST00000601291 EP400Q96L91 3159 aa28.23■■■□□ 2.11
IRF3-228ENST00000601291 CAMTA2O94983 1202 aa28.23■■■□□ 2.11
IRF3-228ENST00000601291 ZNF652Q9Y2D9 606 aa28.23■■■□□ 2.11
IRF3-228ENST00000601291 ANKRD36CQ5JPF3 1778 aa28.23■■■□□ 2.11
IRF3-228ENST00000601291 SIRT2Q8IXJ6 389 aa28.22■■■□□ 2.11
IRF3-228ENST00000601291 BCORQ6W2J9 1755 aa28.21■■■□□ 2.11
IRF3-228ENST00000601291 RGL2O15211 777 aa28.2■■■□□ 2.11
IRF3-228ENST00000601291 PROM2Q8N271 834 aa28.2■■■□□ 2.11
IRF3-228ENST00000601291 NUP98P52948 1817 aa28.19■■■□□ 2.1
IRF3-228ENST00000601291 SCN7AQ01118 1682 aa28.19■■■□□ 2.1
IRF3-228ENST00000601291 ADRA2BP18089 450 aa28.19■■■□□ 2.1
IRF3-228ENST00000601291 UBE3BQ7Z3V4 1068 aa28.19■■■□□ 2.1
IRF3-228ENST00000601291 ATP8B2P98198 1209 aa28.18■■■□□ 2.1
IRF3-228ENST00000601291 SF3B2Q13435 895 aaKnown RBP28.18■■■□□ 2.1
IRF3-228ENST00000601291 CLEC4GQ6UXB4 293 aa28.18■■■□□ 2.1
IRF3-228ENST00000601291 PELP1Q8IZL8 1130 aaKnown RBP28.18■■■□□ 2.1
IRF3-228ENST00000601291 GCC1Q96CN9 775 aa28.18■■■□□ 2.1
IRF3-228ENST00000601291 H7C1W4 665 aa28.17■■■□□ 2.1
IRF3-228ENST00000601291 GPTP24298 496 aa28.17■■■□□ 2.1
IRF3-228ENST00000601291 TRAPPC3LQ5T215 181 aa28.17■■■□□ 2.1
IRF3-228ENST00000601291 SUCLG2Q96I99 432 aa28.17■■■□□ 2.1
IRF3-228ENST00000601291 NARFQ9UHQ1 456 aa28.17■■■□□ 2.1
IRF3-228ENST00000601291 ZPR1O75312 459 aa28.16■■■□□ 2.1
IRF3-228ENST00000601291 NLRP10Q86W26 655 aa28.16■■■□□ 2.1
IRF3-228ENST00000601291 SMC5Q8IY18 1101 aa28.16■■■□□ 2.1
IRF3-228ENST00000601291 ZNF34Q8IZ26 560 aa28.16■■■□□ 2.1
IRF3-228ENST00000601291 PHF14O94880 888 aa28.15■■■□□ 2.1
IRF3-228ENST00000601291 ARHGEF1Q92888 912 aaKnown RBP28.15■■■□□ 2.1
IRF3-228ENST00000601291 PCCAP05165 728 aaPredicted RBP28.14■■■□□ 2.1
IRF3-228ENST00000601291 SSFA2P28290 1259 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms