RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 KNSTRNQ9Y448 316 aa13.77□□□□□ -0.21
MIA-RAB4B-201ENST00000600729 PARP3Q9Y6F1 533 aa13.77□□□□□ -0.21
MIA-RAB4B-201ENST00000600729 CACNA1SQ13698 1873 aa13.76□□□□□ -0.21
MIA-RAB4B-201ENST00000600729 CYP19A1P11511 503 aaPredicted RBP13.76□□□□□ -0.21
MIA-RAB4B-201ENST00000600729 USPL1Q5W0Q7 1092 aa13.76□□□□□ -0.21
MIA-RAB4B-201ENST00000600729 GPR101Q96P66 508 aaPredicted RBP13.76□□□□□ -0.21
MIA-RAB4B-201ENST00000600729 ZBTB1Q9Y2K1 713 aa13.76□□□□□ -0.21
MIA-RAB4B-201ENST00000600729 RANBP2P49792 3224 aaKnown RBP13.76□□□□□ -0.21
MIA-RAB4B-201ENST00000600729 COL15A1P39059 1388 aa13.75□□□□□ -0.21
MIA-RAB4B-201ENST00000600729 ECE1P42892 770 aa13.75□□□□□ -0.21
MIA-RAB4B-201ENST00000600729 BCORQ6W2J9 1755 aa13.75□□□□□ -0.21
MIA-RAB4B-201ENST00000600729 GRM1Q13255 1194 aa13.74□□□□□ -0.21
MIA-RAB4B-201ENST00000600729 PAXIP1Q6ZW49 1069 aaPredicted RBP13.74□□□□□ -0.21
MIA-RAB4B-201ENST00000600729 CCER1Q8TC90 406 aaPredicted RBP13.74□□□□□ -0.21
MIA-RAB4B-201ENST00000600729 NFIXQ14938 502 aa13.73□□□□□ -0.21
MIA-RAB4B-201ENST00000600729 CC2D1BQ5T0F9 858 aaKnown RBP13.73□□□□□ -0.21
MIA-RAB4B-201ENST00000600729 CYP4F22Q6NT55 531 aa13.73□□□□□ -0.21
MIA-RAB4B-201ENST00000600729 MPNDQ8N594 471 aa13.73□□□□□ -0.21
MIA-RAB4B-201ENST00000600729 FER1L6Q2WGJ9 1857 aa13.72□□□□□ -0.21
MIA-RAB4B-201ENST00000600729 MNX1P50219 401 aaPredicted RBP13.71□□□□□ -0.21
MIA-RAB4B-201ENST00000600729 NARFQ9UHQ1 456 aa13.71□□□□□ -0.21
MIA-RAB4B-201ENST00000600729 AOC2O75106 756 aa13.7□□□□□ -0.22
MIA-RAB4B-201ENST00000600729 BRCA2P51587 3418 aa13.7□□□□□ -0.22
MIA-RAB4B-201ENST00000600729 ARFGEF2Q9Y6D5 1785 aa13.7□□□□□ -0.22
MIA-RAB4B-201ENST00000600729 DIAPH1O60610 1272 aaKnown RBP13.69□□□□□ -0.22
MIA-RAB4B-201ENST00000600729 MAP2K2P36507 400 aa13.69□□□□□ -0.22
MIA-RAB4B-201ENST00000600729 IL17REQ8NFR9 667 aa13.69□□□□□ -0.22
MIA-RAB4B-201ENST00000600729 VCANP13611 3396 aa13.68□□□□□ -0.22
MIA-RAB4B-201ENST00000600729 IQCA1LA6NCM1 817 aa13.68□□□□□ -0.22
MIA-RAB4B-201ENST00000600729 NFKBIEO00221 500 aa13.68□□□□□ -0.22
MIA-RAB4B-201ENST00000600729 DDNO94850 711 aaPredicted RBP13.68□□□□□ -0.22
MIA-RAB4B-201ENST00000600729 ZNF496Q96IT1 587 aaPredicted RBP13.68□□□□□ -0.22
MIA-RAB4B-201ENST00000600729 TAF1DQ9H5J8 278 aaPredicted RBP13.68□□□□□ -0.22
MIA-RAB4B-201ENST00000600729 SLX4Q8IY92 1834 aa13.68□□□□□ -0.22
MIA-RAB4B-201ENST00000600729 DLG5Q8TDM6 1919 aa13.67□□□□□ -0.22
MIA-RAB4B-201ENST00000600729 KCNQ3O43525 872 aa13.67□□□□□ -0.22
MIA-RAB4B-201ENST00000600729 ZPR1O75312 459 aa13.67□□□□□ -0.22
MIA-RAB4B-201ENST00000600729 SERPINB2P05120 415 aa13.67□□□□□ -0.22
MIA-RAB4B-201ENST00000600729 CANXP27824 592 aaKnown RBP13.67□□□□□ -0.22
MIA-RAB4B-201ENST00000600729 EIF5P55010 431 aaKnown RBP13.67□□□□□ -0.22
MIA-RAB4B-201ENST00000600729 CNGB1Q14028 1251 aaPredicted RBP13.67□□□□□ -0.22
MIA-RAB4B-201ENST00000600729 NPC1L1Q9UHC9 1359 aa13.67□□□□□ -0.22
MIA-RAB4B-201ENST00000600729 HEG1Q9ULI3 1381 aa13.67□□□□□ -0.22
MIA-RAB4B-201ENST00000600729 VSIG10Q8N0Z9 540 aa13.66□□□□□ -0.22
MIA-RAB4B-201ENST00000600729 CCDC24Q8N4L8 307 aa13.66□□□□□ -0.22
MIA-RAB4B-201ENST00000600729 CEMIPQ8WUJ3 1361 aa13.66□□□□□ -0.22
MIA-RAB4B-201ENST00000600729 CENPFP49454 3210 aa13.65□□□□□ -0.22
MIA-RAB4B-201ENST00000600729 BRPF1P55201 1214 aaPredicted RBP13.65□□□□□ -0.22
MIA-RAB4B-201ENST00000600729 ERFEQ4G0M1 354 aa13.65□□□□□ -0.22
MIA-RAB4B-201ENST00000600729 EAPPQ56P03 285 aaPredicted RBP13.65□□□□□ -0.22
MIA-RAB4B-201ENST00000600729 TBC1D9BQ66K14 1250 aa13.65□□□□□ -0.22
MIA-RAB4B-201ENST00000600729 BICDL1Q6ZP65 573 aa13.65□□□□□ -0.22
MIA-RAB4B-201ENST00000600729 PHACTR3Q96KR7 559 aa13.65□□□□□ -0.22
MIA-RAB4B-201ENST00000600729 AKAP11Q9UKA4 1901 aa13.64□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 MAP1SQ66K74 1059 aaPredicted RBP13.64□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 ZNF790Q6PG37 636 aa13.64□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 CNTROBQ8N137 903 aa13.64□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 LAMB4A4D0S4 1761 aa13.63□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 PRAMEF22A3QJZ6 481 aa13.63□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 U2SURPO15042 1029 aaKnown RBP13.63□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 A1BGP04217 495 aa13.63□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 PIP4K2AP48426 406 aaPredicted RBP13.63□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 C2CD5Q86YS7 1000 aa13.63□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 L3MBTL3Q96JM7 780 aaPredicted RBP13.63□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 DDX21Q9NR30 783 aaKnown RBP eCLIP13.63□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 TBC1D2BQ9UPU7 963 aa13.63□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 COLQQ9Y215 455 aaPredicted RBP13.63□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 CLEC11AQ9Y240 323 aa13.63□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 KIAA0100Q14667 2235 aaKnown RBP13.63□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 GNAT3A8MTJ3 354 aa13.62□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 PRR5LQ6MZQ0 368 aa13.62□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 RSPH6AQ9H0K4 717 aa13.62□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 KDM3BQ7LBC6 1761 aa13.62□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 HTTP42858 3142 aa13.62□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 CACNA1AO00555 2505 aa13.62□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 CAMTA2O94983 1202 aa13.61□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 HPS5Q9UPZ3 1129 aa13.61□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 PRKAR2BP31323 418 aa13.6□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 CIAPIN1Q6FI81 312 aa13.6□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 TTC5Q8N0Z6 440 aa13.6□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 TTLL6Q8N841 843 aa13.6□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 GAS2L2Q8NHY3 880 aa13.6□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 LAMA3Q16787 3333 aa13.59□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 STARD3NLO95772 234 aa13.59□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 TEFQ10587 303 aa13.59□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 ZNF330Q9Y3S2 320 aaPredicted RBP13.59□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 USP16Q9Y5T5 823 aa13.59□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 TLL2Q9Y6L7 1015 aa13.59□□□□□ -0.23
MIA-RAB4B-201ENST00000600729 SPTBN5Q9NRC6 3674 aaKnown RBP13.58□□□□□ -0.24
MIA-RAB4B-201ENST00000600729 IL6STP40189 918 aaPredicted RBP13.58□□□□□ -0.24
MIA-RAB4B-201ENST00000600729 NUP98P52948 1817 aa13.57□□□□□ -0.24
MIA-RAB4B-201ENST00000600729 H0YIN7 160 aa13.57□□□□□ -0.24
MIA-RAB4B-201ENST00000600729 C21orf2O43822 256 aa13.57□□□□□ -0.24
MIA-RAB4B-201ENST00000600729 FMR1Q06787 632 aaKnown RBP eCLIP13.57□□□□□ -0.24
MIA-RAB4B-201ENST00000600729 DCTN1Q14203 1278 aa13.57□□□□□ -0.24
MIA-RAB4B-201ENST00000600729 CTU1Q7Z7A3 348 aaKnown RBP13.57□□□□□ -0.24
MIA-RAB4B-201ENST00000600729 FMNL2Q96PY5 1086 aa13.57□□□□□ -0.24
MIA-RAB4B-201ENST00000600729 RBBP6Q7Z6E9 1792 aaKnown RBP13.57□□□□□ -0.24
MIA-RAB4B-201ENST00000600729 A0A087WZG4 1122 aa13.56□□□□□ -0.24
MIA-RAB4B-201ENST00000600729 NBPF26B4DH59 902 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms