RNA–Protein interactions for RNA: ENST00000600646.5

FKRP-220, Transcript of fukutin related protein, humanhuman

TSL 3

Gene FKRP, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-220ENST00000600646 NBPF15Q8N660 670 aa9.91□□□□□ -0.82
FKRP-220ENST00000600646 TSR2Q969E8 191 aaKnown RBP9.91□□□□□ -0.82
FKRP-220ENST00000600646 PDZRN3Q9UPQ7 1066 aa9.91□□□□□ -0.82
FKRP-220ENST00000600646 MAP3K15Q6ZN16 1313 aa9.9□□□□□ -0.82
FKRP-220ENST00000600646 CAMTA2O94983 1202 aa9.9□□□□□ -0.82
FKRP-220ENST00000600646 SERPINB2P05120 415 aa9.9□□□□□ -0.82
FKRP-220ENST00000600646 ST5P78524 1137 aa9.9□□□□□ -0.82
FKRP-220ENST00000600646 AIMP1Q12904 312 aaKnown RBP9.9□□□□□ -0.82
FKRP-220ENST00000600646 NFIXQ14938 502 aa9.9□□□□□ -0.82
FKRP-220ENST00000600646 TPTE2Q6XPS3 522 aa9.9□□□□□ -0.82
FKRP-220ENST00000600646 NYXQ9GZU5 481 aa9.9□□□□□ -0.82
FKRP-220ENST00000600646 CHPF2Q9P2E5 772 aa9.9□□□□□ -0.82
FKRP-220ENST00000600646 NIP7Q9Y221 180 aaKnown RBP eCLIP9.9□□□□□ -0.82
FKRP-220ENST00000600646 FANCIQ9NVI1 1328 aa9.89□□□□□ -0.83
FKRP-220ENST00000600646 POLRMTO00411 1230 aaKnown RBP9.89□□□□□ -0.83
FKRP-220ENST00000600646 PDE6BP35913 854 aa9.89□□□□□ -0.83
FKRP-220ENST00000600646 GPR162Q16538 588 aa9.89□□□□□ -0.83
FKRP-220ENST00000600646 KRT24Q2M2I5 525 aa9.89□□□□□ -0.83
FKRP-220ENST00000600646 TBC1D9BQ66K14 1250 aa9.89□□□□□ -0.83
FKRP-220ENST00000600646 COPS6Q7L5N1 327 aa9.89□□□□□ -0.83
FKRP-220ENST00000600646 PPP1R42Q7Z4L9 355 aa9.89□□□□□ -0.83
FKRP-220ENST00000600646 NBPF5PQ86XG9 351 aaPredicted RBP9.89□□□□□ -0.83
FKRP-220ENST00000600646 PELP1Q8IZL8 1130 aaKnown RBP9.89□□□□□ -0.83
FKRP-220ENST00000600646 C8orf58Q8NAV2 365 aa9.89□□□□□ -0.83
FKRP-220ENST00000600646 BCL2L12Q9HB09 334 aa9.89□□□□□ -0.83
FKRP-220ENST00000600646 SCN7AQ01118 1682 aa9.89□□□□□ -0.83
FKRP-220ENST00000600646 PARP10Q53GL7 1025 aa9.88□□□□□ -0.83
FKRP-220ENST00000600646 GIGYF2Q6Y7W6 1299 aaKnown RBP9.88□□□□□ -0.83
FKRP-220ENST00000600646 ANKRD13DQ6ZTN6 518 aa9.88□□□□□ -0.83
FKRP-220ENST00000600646 RIC3Q7Z5B4 369 aa9.88□□□□□ -0.83
FKRP-220ENST00000600646 CNBD1Q8NA66 436 aa9.88□□□□□ -0.83
FKRP-220ENST00000600646 XAGE3Q8WTP9 111 aa9.88□□□□□ -0.83
FKRP-220ENST00000600646 ZBTB3Q9H5J0 574 aa9.88□□□□□ -0.83
FKRP-220ENST00000600646 BCORQ6W2J9 1755 aa9.88□□□□□ -0.83
FKRP-220ENST00000600646 H0YIN7 160 aa9.87□□□□□ -0.83
FKRP-220ENST00000600646 GRIN3BO60391 1043 aa9.87□□□□□ -0.83
FKRP-220ENST00000600646 HNRNPUQ00839 825 aaKnown RBP eCLIP9.87□□□□□ -0.83
FKRP-220ENST00000600646 EXOSC9Q06265 439 aaKnown RBP9.87□□□□□ -0.83
FKRP-220ENST00000600646 DDR1Q08345 913 aa9.87□□□□□ -0.83
FKRP-220ENST00000600646 PDIA6Q15084 440 aa9.87□□□□□ -0.83
FKRP-220ENST00000600646 TTLL7Q6ZT98 887 aa9.87□□□□□ -0.83
FKRP-220ENST00000600646 PLBD2Q8NHP8 589 aa9.87□□□□□ -0.83
FKRP-220ENST00000600646 ANXA1P04083 346 aa9.86□□□□□ -0.83
FKRP-220ENST00000600646 HSP90B1P14625 803 aaKnown RBP9.86□□□□□ -0.83
FKRP-220ENST00000600646 NEXNQ0ZGT2 675 aa9.86□□□□□ -0.83
FKRP-220ENST00000600646 HLFQ16534 295 aa9.86□□□□□ -0.83
FKRP-220ENST00000600646 ZNF428Q96B54 188 aa9.86□□□□□ -0.83
FKRP-220ENST00000600646 BRIP1Q9BX63 1249 aa9.86□□□□□ -0.83
FKRP-220ENST00000600646 PIM2Q9P1W9 311 aa9.86□□□□□ -0.83
FKRP-220ENST00000600646 RNF123Q5XPI4 1314 aa9.85□□□□□ -0.83
FKRP-220ENST00000600646 ZNF521Q96K83 1311 aa9.85□□□□□ -0.83
FKRP-220ENST00000600646 C10orf71Q711Q0 1435 aa9.85□□□□□ -0.83
FKRP-220ENST00000600646 ATP10DQ9P241 1426 aa9.85□□□□□ -0.83
FKRP-220ENST00000600646 SLC4A2P04920 1241 aa9.85□□□□□ -0.83
FKRP-220ENST00000600646 CT47B1P0C2W7 299 aaPredicted RBP9.85□□□□□ -0.83
FKRP-220ENST00000600646 PROSER3Q2NL68 480 aa9.85□□□□□ -0.83
FKRP-220ENST00000600646 TSPYL6Q8N831 410 aa9.85□□□□□ -0.83
FKRP-220ENST00000600646 NLGN2Q8NFZ4 835 aa9.85□□□□□ -0.83
FKRP-220ENST00000600646 FAM177BA6PVY3 158 aa9.84□□□□□ -0.83
FKRP-220ENST00000600646 VAMP4O75379 141 aa9.84□□□□□ -0.83
FKRP-220ENST00000600646 GPTP24298 496 aa9.84□□□□□ -0.83
FKRP-220ENST00000600646 SLFN5Q08AF3 891 aa9.84□□□□□ -0.83
FKRP-220ENST00000600646 TCIRG1Q13488 830 aa9.84□□□□□ -0.83
FKRP-220ENST00000600646 PRR5LQ6MZQ0 368 aa9.84□□□□□ -0.83
FKRP-220ENST00000600646 LRP10Q7Z4F1 713 aa9.84□□□□□ -0.83
FKRP-220ENST00000600646 C2CD5Q86YS7 1000 aa9.84□□□□□ -0.83
FKRP-220ENST00000600646 ZNF34Q8IZ26 560 aa9.84□□□□□ -0.83
FKRP-220ENST00000600646 UTP14AQ9BVJ6 771 aaKnown RBP9.84□□□□□ -0.83
FKRP-220ENST00000600646 IBTKQ9P2D0 1353 aaPredicted RBP9.84□□□□□ -0.83
FKRP-220ENST00000600646 A0A0G2JLW4 131 aa9.83□□□□□ -0.84
FKRP-220ENST00000600646 DPEP1P16444 411 aa9.83□□□□□ -0.84
FKRP-220ENST00000600646 FKBP5Q13451 457 aaPredicted RBP9.83□□□□□ -0.84
FKRP-220ENST00000600646 DALRD3Q5D0E6 543 aaKnown RBP9.83□□□□□ -0.84
FKRP-220ENST00000600646 TMX4Q9H1E5 349 aaPredicted RBP9.83□□□□□ -0.84
FKRP-220ENST00000600646 PHAXQ9H814 394 aaKnown RBP9.83□□□□□ -0.84
FKRP-220ENST00000600646 TRMT112Q9UI30 125 aaKnown RBP9.83□□□□□ -0.84
FKRP-220ENST00000600646 BCS1LQ9Y276 419 aa9.83□□□□□ -0.84
FKRP-220ENST00000600646 NUP98P52948 1817 aa9.83□□□□□ -0.84
FKRP-220ENST00000600646 AFDNP55196 1824 aaKnown RBP9.83□□□□□ -0.84
FKRP-220ENST00000600646 KIF13BQ9NQT8 1826 aa9.83□□□□□ -0.84
FKRP-220ENST00000600646 NRXN2Q9P2S2 1712 aa9.82□□□□□ -0.84
FKRP-220ENST00000600646 ALDH1B1P30837 517 aa9.82□□□□□ -0.84
FKRP-220ENST00000600646 KSR2Q6VAB6 950 aa9.82□□□□□ -0.84
FKRP-220ENST00000600646 TTLL6Q8N841 843 aa9.82□□□□□ -0.84
FKRP-220ENST00000600646 CNKSR1Q969H4 720 aa9.82□□□□□ -0.84
FKRP-220ENST00000600646 ZNF622Q969S3 477 aaKnown RBP eCLIP9.82□□□□□ -0.84
FKRP-220ENST00000600646 NLRP3Q96P20 1036 aa9.82□□□□□ -0.84
FKRP-220ENST00000600646 SPINK5Q9NQ38 1064 aaPredicted RBP9.82□□□□□ -0.84
FKRP-220ENST00000600646 CACNA1FO60840 1977 aa9.81□□□□□ -0.84
FKRP-220ENST00000600646 PXDNLA1KZ92 1463 aa9.81□□□□□ -0.84
FKRP-220ENST00000600646 TCERG1O14776 1098 aaKnown RBP9.81□□□□□ -0.84
FKRP-220ENST00000600646 NPR1P16066 1061 aa9.81□□□□□ -0.84
FKRP-220ENST00000600646 FLIIQ13045 1269 aa9.81□□□□□ -0.84
FKRP-220ENST00000600646 TRIM28Q13263 835 aaKnown RBP9.81□□□□□ -0.84
FKRP-220ENST00000600646 SOGA3Q5TF21 947 aa9.81□□□□□ -0.84
FKRP-220ENST00000600646 SUSD4Q5VX71 490 aa9.81□□□□□ -0.84
FKRP-220ENST00000600646 STYK1Q6J9G0 422 aa9.81□□□□□ -0.84
FKRP-220ENST00000600646 NLRP10Q86W26 655 aa9.81□□□□□ -0.84
FKRP-220ENST00000600646 CCDC191Q8NCU4 936 aa9.81□□□□□ -0.84
FKRP-220ENST00000600646 RPGRQ92834 1020 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms