RNA–Protein interactions for RNA: ENST00000599839.5

CALM3-212, Transcript of calmodulin 3, humanhuman

TSL 1 (best) BASIC

Gene CALM3, Length 1,355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-212ENST00000599839 POLD1P28340 1107 aa20.34■□□□□ 0.85
CALM3-212ENST00000599839 NLGN1Q8N2Q7 840 aa20.34■□□□□ 0.85
CALM3-212ENST00000599839 HLFQ16534 295 aa20.34■□□□□ 0.85
CALM3-212ENST00000599839 VAMP4O75379 141 aa20.33■□□□□ 0.84
CALM3-212ENST00000599839 NFIXQ14938 502 aa20.33■□□□□ 0.84
CALM3-212ENST00000599839 TBC1D9BQ66K14 1250 aa20.33■□□□□ 0.84
CALM3-212ENST00000599839 NPM2Q86SE8 214 aaKnown RBP20.33■□□□□ 0.84
CALM3-212ENST00000599839 TRMT2AQ8IZ69 625 aaKnown RBP20.33■□□□□ 0.84
CALM3-212ENST00000599839 DBF4Q9UBU7 674 aaPredicted RBP20.33■□□□□ 0.84
CALM3-212ENST00000599839 MAP3K15Q6ZN16 1313 aa20.32■□□□□ 0.84
CALM3-212ENST00000599839 TM4SF1P30408 202 aa20.32■□□□□ 0.84
CALM3-212ENST00000599839 XAGE3Q8WTP9 111 aa20.32■□□□□ 0.84
CALM3-212ENST00000599839 ZBTB3Q9H5J0 574 aa20.32■□□□□ 0.84
CALM3-212ENST00000599839 PPP1R1BQ9UD71 204 aaPredicted RBP20.32■□□□□ 0.84
CALM3-212ENST00000599839 ANKRD31Q8N7Z5 1873 aa20.31■□□□□ 0.84
CALM3-212ENST00000599839 POLRMTO00411 1230 aaKnown RBP20.31■□□□□ 0.84
CALM3-212ENST00000599839 AIMP1Q12904 312 aaKnown RBP20.31■□□□□ 0.84
CALM3-212ENST00000599839 BICDL1Q6ZP65 573 aa20.31■□□□□ 0.84
CALM3-212ENST00000599839 COPS6Q7L5N1 327 aa20.31■□□□□ 0.84
CALM3-212ENST00000599839 PHAXQ9H814 394 aaKnown RBP20.31■□□□□ 0.84
CALM3-212ENST00000599839 FHDC1Q9C0D6 1143 aaPredicted RBP20.3■□□□□ 0.84
CALM3-212ENST00000599839 N4BP2Q86UW6 1770 aaPredicted RBP20.3■□□□□ 0.84
CALM3-212ENST00000599839 ZBED9Q6R2W3 1325 aa20.29■□□□□ 0.84
CALM3-212ENST00000599839 CCDC30Q5VVM6 783 aa20.29■□□□□ 0.84
CALM3-212ENST00000599839 KIF6Q6ZMV9 814 aa20.29■□□□□ 0.84
CALM3-212ENST00000599839 C10orf71Q711Q0 1435 aa20.29■□□□□ 0.84
CALM3-212ENST00000599839 KLHL34Q8N239 644 aa20.28■□□□□ 0.84
CALM3-212ENST00000599839 CARMIL3Q8ND23 1372 aa20.27■□□□□ 0.84
CALM3-212ENST00000599839 HYPKQ9NX55 129 aa20.27■□□□□ 0.84
CALM3-212ENST00000599839 PARP3Q9Y6F1 533 aa20.27■□□□□ 0.84
CALM3-212ENST00000599839 ATP10DQ9P241 1426 aa20.27■□□□□ 0.84
CALM3-212ENST00000599839 ERVV-1B6SEH8 477 aa20.26■□□□□ 0.83
CALM3-212ENST00000599839 G2E3Q7L622 706 aa20.26■□□□□ 0.83
CALM3-212ENST00000599839 COL11A2P13942 1736 aaPredicted RBP20.26■□□□□ 0.83
CALM3-212ENST00000599839 BRCA1P38398 1863 aaKnown RBP20.25■□□□□ 0.83
CALM3-212ENST00000599839 CLEC4GQ6UXB4 293 aa20.25■□□□□ 0.83
CALM3-212ENST00000599839 NLGN2Q8NFZ4 835 aa20.25■□□□□ 0.83
CALM3-212ENST00000599839 SYT17Q9BSW7 474 aa20.25■□□□□ 0.83
CALM3-212ENST00000599839 ZNF652Q9Y2D9 606 aa20.25■□□□□ 0.83
CALM3-212ENST00000599839 TNRC6CQ9HCJ0 1690 aaKnown RBP20.25■□□□□ 0.83
CALM3-212ENST00000599839 UBN2Q6ZU65 1347 aa20.25■□□□□ 0.83
CALM3-212ENST00000599839 SERPINB2P05120 415 aa20.24■□□□□ 0.83
CALM3-212ENST00000599839 DLEC1Q9Y238 1755 aa20.24■□□□□ 0.83
CALM3-212ENST00000599839 RGL2O15211 777 aa20.23■□□□□ 0.83
CALM3-212ENST00000599839 SLC4A2P04920 1241 aa20.23■□□□□ 0.83
CALM3-212ENST00000599839 GPTP24298 496 aa20.23■□□□□ 0.83
CALM3-212ENST00000599839 GIGYF2Q6Y7W6 1299 aaKnown RBP20.23■□□□□ 0.83
CALM3-212ENST00000599839 STK31Q9BXU1 1019 aa20.23■□□□□ 0.83
CALM3-212ENST00000599839 NIP7Q9Y221 180 aaKnown RBP eCLIP20.23■□□□□ 0.83
CALM3-212ENST00000599839 CCDC24Q8N4L8 307 aa20.22■□□□□ 0.83
CALM3-212ENST00000599839 PLBD2Q8NHP8 589 aa20.22■□□□□ 0.83
CALM3-212ENST00000599839 SETDB2Q96T68 719 aa20.22■□□□□ 0.83
CALM3-212ENST00000599839 PXDNLA1KZ92 1463 aa20.22■□□□□ 0.83
CALM3-212ENST00000599839 ADCY9O60503 1353 aa20.21■□□□□ 0.83
CALM3-212ENST00000599839 ANKRD13DQ6ZTN6 518 aa20.21■□□□□ 0.83
CALM3-212ENST00000599839 ZNF34Q8IZ26 560 aa20.21■□□□□ 0.83
CALM3-212ENST00000599839 FAM177BA6PVY3 158 aa20.21■□□□□ 0.83
CALM3-212ENST00000599839 PRR5LQ6MZQ0 368 aa20.21■□□□□ 0.83
CALM3-212ENST00000599839 ZNF428Q96B54 188 aa20.21■□□□□ 0.83
CALM3-212ENST00000599839 CACNA1SQ13698 1873 aa20.2■□□□□ 0.82
CALM3-212ENST00000599839 FLIIQ13045 1269 aa20.2■□□□□ 0.82
CALM3-212ENST00000599839 CD2APQ9Y5K6 639 aa20.2■□□□□ 0.82
CALM3-212ENST00000599839 LAMB2P55268 1798 aa20.2■□□□□ 0.82
CALM3-212ENST00000599839 DDX60Q8IY21 1712 aaKnown RBP20.19■□□□□ 0.82
CALM3-212ENST00000599839 SSH1Q8WYL5 1049 aa20.19■□□□□ 0.82
CALM3-212ENST00000599839 BCL2L13Q9BXK5 485 aa20.19■□□□□ 0.82
CALM3-212ENST00000599839 CHMP4AQ9BY43 222 aa20.19■□□□□ 0.82
CALM3-212ENST00000599839 ABCC12Q96J65 1359 aa20.18■□□□□ 0.82
CALM3-212ENST00000599839 GOLGB1Q14789 3259 aaKnown RBP20.18■□□□□ 0.82
CALM3-212ENST00000599839 TCIRG1Q13488 830 aa20.18■□□□□ 0.82
CALM3-212ENST00000599839 SUSD4Q5VX71 490 aa20.18■□□□□ 0.82
CALM3-212ENST00000599839 ATP5J2-PTCD1G3V325 749 aa20.17■□□□□ 0.82
CALM3-212ENST00000599839 RIC3Q7Z5B4 369 aa20.17■□□□□ 0.82
CALM3-212ENST00000599839 NBPF5PQ86XG9 351 aaPredicted RBP20.17■□□□□ 0.82
CALM3-212ENST00000599839 MRPL50Q8N5N7 158 aaKnown RBP20.17■□□□□ 0.82
CALM3-212ENST00000599839 CNBD1Q8NA66 436 aa20.17■□□□□ 0.82
CALM3-212ENST00000599839 MAP3K2Q9Y2U5 619 aa20.17■□□□□ 0.82
CALM3-212ENST00000599839 PI4KAP2A4QPH2 592 aa20.16■□□□□ 0.82
CALM3-212ENST00000599839 NTSR2O95665 410 aa20.16■□□□□ 0.82
CALM3-212ENST00000599839 NLRP10Q86W26 655 aa20.16■□□□□ 0.82
CALM3-212ENST00000599839 NUTM1Q86Y26 1132 aa20.16■□□□□ 0.82
CALM3-212ENST00000599839 PI4KAP1Q8N8J0 262 aa20.16■□□□□ 0.82
CALM3-212ENST00000599839 ISCA1Q9BUE6 129 aa20.16■□□□□ 0.82
CALM3-212ENST00000599839 IBTKQ9P2D0 1353 aaPredicted RBP20.15■□□□□ 0.82
CALM3-212ENST00000599839 FKBP5Q13451 457 aaPredicted RBP20.15■□□□□ 0.82
CALM3-212ENST00000599839 HSP90AB3PQ58FF7 597 aa20.15■□□□□ 0.82
CALM3-212ENST00000599839 KSR2Q6VAB6 950 aa20.15■□□□□ 0.82
CALM3-212ENST00000599839 YTHDC1Q96MU7 727 aaKnown RBP20.15■□□□□ 0.82
CALM3-212ENST00000599839 MYD88Q99836 296 aa20.15■□□□□ 0.82
CALM3-212ENST00000599839 WWC3Q9ULE0 1092 aa20.15■□□□□ 0.82
CALM3-212ENST00000599839 DDX58O95786 925 aaKnown RBP20.14■□□□□ 0.81
CALM3-212ENST00000599839 CHRNA5P30532 468 aa20.14■□□□□ 0.81
CALM3-212ENST00000599839 A0A0G2JLW4 131 aa20.13■□□□□ 0.81
CALM3-212ENST00000599839 F6X3S4 739 aa20.13■□□□□ 0.81
CALM3-212ENST00000599839 CT47B1P0C2W7 299 aaPredicted RBP20.13■□□□□ 0.81
CALM3-212ENST00000599839 DPEP1P16444 411 aa20.13■□□□□ 0.81
CALM3-212ENST00000599839 ERFEQ4G0M1 354 aa20.13■□□□□ 0.81
CALM3-212ENST00000599839 METTL22Q9BUU2 404 aaPredicted RBP20.13■□□□□ 0.81
CALM3-212ENST00000599839 ALDH1L2Q3SY69 923 aa20.12■□□□□ 0.81
CALM3-212ENST00000599839 PARP10Q53GL7 1025 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms