RNA–Protein interactions for RNA: ENST00000599808.1

HOMER3-211, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-211ENST00000599808 CNTNAP1P78357 1384 aa16.64■□□□□ 0.26
HOMER3-211ENST00000599808 NPHP1O15259 732 aa16.64■□□□□ 0.25
HOMER3-211ENST00000599808 FOXN1O15353 648 aa16.64■□□□□ 0.25
HOMER3-211ENST00000599808 PER1O15534 1290 aaPredicted RBP16.64■□□□□ 0.25
HOMER3-211ENST00000599808 ST5P78524 1137 aa16.64■□□□□ 0.25
HOMER3-211ENST00000599808 CC2D1BQ5T0F9 858 aaKnown RBP16.64■□□□□ 0.25
HOMER3-211ENST00000599808 SOGA3Q5TF21 947 aa16.64■□□□□ 0.25
HOMER3-211ENST00000599808 MASTLQ96GX5 879 aa16.64■□□□□ 0.25
HOMER3-211ENST00000599808 FMNL2Q96PY5 1086 aa16.64■□□□□ 0.25
HOMER3-211ENST00000599808 IQCA1LA6NCM1 817 aa16.63■□□□□ 0.25
HOMER3-211ENST00000599808 NPM2Q86SE8 214 aaKnown RBP16.63■□□□□ 0.25
HOMER3-211ENST00000599808 GAS2L2Q8NHY3 880 aa16.63■□□□□ 0.25
HOMER3-211ENST00000599808 L3MBTL3Q96JM7 780 aaPredicted RBP16.63■□□□□ 0.25
HOMER3-211ENST00000599808 TAF1DQ9H5J8 278 aaPredicted RBP16.63■□□□□ 0.25
HOMER3-211ENST00000599808 KIF7Q2M1P5 1343 aa16.63■□□□□ 0.25
HOMER3-211ENST00000599808 KCNQ3O43525 872 aa16.62■□□□□ 0.25
HOMER3-211ENST00000599808 LDHDQ86WU2 507 aa16.62■□□□□ 0.25
HOMER3-211ENST00000599808 DZIP3Q86Y13 1208 aaKnown RBP16.62■□□□□ 0.25
HOMER3-211ENST00000599808 C7orf43Q8WVR3 580 aa16.62■□□□□ 0.25
HOMER3-211ENST00000599808 CEMIPQ8WUJ3 1361 aa16.62■□□□□ 0.25
HOMER3-211ENST00000599808 U2SURPO15042 1029 aaKnown RBP16.61■□□□□ 0.25
HOMER3-211ENST00000599808 PIP4K2AP48426 406 aaPredicted RBP16.61■□□□□ 0.25
HOMER3-211ENST00000599808 ADAMTSL1Q8N6G6 1762 aa16.61■□□□□ 0.25
HOMER3-211ENST00000599808 ITGBL1O95965 494 aaPredicted RBP16.6■□□□□ 0.25
HOMER3-211ENST00000599808 CCDC93Q567U6 631 aa16.6■□□□□ 0.25
HOMER3-211ENST00000599808 PRDM10Q9NQV6 1147 aa16.6■□□□□ 0.25
HOMER3-211ENST00000599808 USP16Q9Y5T5 823 aa16.6■□□□□ 0.25
HOMER3-211ENST00000599808 BTBD11A6QL63 1104 aa16.59■□□□□ 0.25
HOMER3-211ENST00000599808 VEGFBP49765 207 aa16.59■□□□□ 0.25
HOMER3-211ENST00000599808 NBPF5PQ86XG9 351 aaPredicted RBP16.59■□□□□ 0.25
HOMER3-211ENST00000599808 ZNF541Q9H0D2 1346 aa16.59■□□□□ 0.25
HOMER3-211ENST00000599808 PRAMEF22A3QJZ6 481 aa16.58■□□□□ 0.24
HOMER3-211ENST00000599808 TMEM88BA6NKF7 163 aa16.58■□□□□ 0.24
HOMER3-211ENST00000599808 NPR1P16066 1061 aa16.58■□□□□ 0.24
HOMER3-211ENST00000599808 FKBP4Q02790 459 aaKnown RBP eCLIP16.58■□□□□ 0.24
HOMER3-211ENST00000599808 EAPPQ56P03 285 aaPredicted RBP16.58■□□□□ 0.24
HOMER3-211ENST00000599808 OLFM4Q6UX06 510 aa16.58■□□□□ 0.24
HOMER3-211ENST00000599808 CLEC4GQ6UXB4 293 aa16.58■□□□□ 0.24
HOMER3-211ENST00000599808 ZNF277Q9NRM2 450 aaPredicted RBP16.58■□□□□ 0.24
HOMER3-211ENST00000599808 KLRG2A4D1S0 409 aaPredicted RBP16.57■□□□□ 0.24
HOMER3-211ENST00000599808 CTCFP49711 727 aaPredicted RBP16.57■□□□□ 0.24
HOMER3-211ENST00000599808 PHACTR3Q96KR7 559 aa16.57■□□□□ 0.24
HOMER3-211ENST00000599808 HACL1Q9UJ83 578 aa16.57■□□□□ 0.24
HOMER3-211ENST00000599808 CNGB1Q14028 1251 aaPredicted RBP16.56■□□□□ 0.24
HOMER3-211ENST00000599808 AIDAQ96BJ3 306 aa16.56■□□□□ 0.24
HOMER3-211ENST00000599808 WBP1LQ9NX94 342 aa16.56■□□□□ 0.24
HOMER3-211ENST00000599808 ZNF652Q9Y2D9 606 aa16.56■□□□□ 0.24
HOMER3-211ENST00000599808 EPHX2P34913 555 aa16.55■□□□□ 0.24
HOMER3-211ENST00000599808 CLEC11AQ9Y240 323 aa16.55■□□□□ 0.24
HOMER3-211ENST00000599808 NPC1L1Q9UHC9 1359 aa16.54■□□□□ 0.24
HOMER3-211ENST00000599808 RNF123Q5XPI4 1314 aa16.54■□□□□ 0.24
HOMER3-211ENST00000599808 PRKAR2BP31323 418 aa16.54■□□□□ 0.24
HOMER3-211ENST00000599808 LBX1P52954 281 aa16.54■□□□□ 0.24
HOMER3-211ENST00000599808 TPTE2Q6XPS3 522 aa16.54■□□□□ 0.24
HOMER3-211ENST00000599808 RTKN2Q8IZC4 609 aa16.54■□□□□ 0.24
HOMER3-211ENST00000599808 RSPH6AQ9H0K4 717 aa16.54■□□□□ 0.24
HOMER3-211ENST00000599808 NIP7Q9Y221 180 aaKnown RBP eCLIP16.54■□□□□ 0.24
HOMER3-211ENST00000599808 FAM177BA6PVY3 158 aa16.53■□□□□ 0.24
HOMER3-211ENST00000599808 NBPF26B4DH59 902 aa16.53■□□□□ 0.24
HOMER3-211ENST00000599808 FZD9O00144 591 aa16.53■□□□□ 0.24
HOMER3-211ENST00000599808 SNRPA1P09661 255 aaKnown RBP16.53■□□□□ 0.24
HOMER3-211ENST00000599808 MAP1SQ66K74 1059 aaPredicted RBP16.53■□□□□ 0.24
HOMER3-211ENST00000599808 NBPF10Q6P3W6 841 aaKnown RBP16.53■□□□□ 0.24
HOMER3-211ENST00000599808 CNTROBQ8N137 903 aa16.53■□□□□ 0.24
HOMER3-211ENST00000599808 NBPF15Q8N660 670 aa16.53■□□□□ 0.24
HOMER3-211ENST00000599808 RASSF10A6NK89 507 aa16.52■□□□□ 0.24
HOMER3-211ENST00000599808 IARSP41252 1262 aaKnown RBP16.52■□□□□ 0.24
HOMER3-211ENST00000599808 DEFB115Q30KQ5 88 aa16.52■□□□□ 0.24
HOMER3-211ENST00000599808 PNMA8AQ86V59 439 aaPredicted RBP16.52■□□□□ 0.24
HOMER3-211ENST00000599808 SYNE4Q8N205 404 aa16.52■□□□□ 0.24
HOMER3-211ENST00000599808 SNED1Q8TER0 1413 aa16.52■□□□□ 0.23
HOMER3-211ENST00000599808 NUP98P52948 1817 aa16.52■□□□□ 0.23
HOMER3-211ENST00000599808 LTBP1Q14766 1721 aa16.51■□□□□ 0.23
HOMER3-211ENST00000599808 COL4A5P29400 1685 aa16.51■□□□□ 0.23
HOMER3-211ENST00000599808 RGL2O15211 777 aa16.51■□□□□ 0.23
HOMER3-211ENST00000599808 ALDH1B1P30837 517 aa16.51■□□□□ 0.23
HOMER3-211ENST00000599808 MCM10Q7L590 875 aa16.51■□□□□ 0.23
HOMER3-211ENST00000599808 GPC2Q8N158 579 aa16.51■□□□□ 0.23
HOMER3-211ENST00000599808 LAMB4A4D0S4 1761 aa16.51■□□□□ 0.23
HOMER3-211ENST00000599808 HSPA8P11142 646 aaKnown RBP16.5■□□□□ 0.23
HOMER3-211ENST00000599808 HLFQ16534 295 aa16.5■□□□□ 0.23
HOMER3-211ENST00000599808 TRPM7Q96QT4 1865 aa16.5■□□□□ 0.23
HOMER3-211ENST00000599808 CCER1Q8TC90 406 aaPredicted RBP16.49■□□□□ 0.23
HOMER3-211ENST00000599808 WDR33Q9C0J8 1336 aaKnown RBP16.48■□□□□ 0.23
HOMER3-211ENST00000599808 DCTN1Q14203 1278 aa16.48■□□□□ 0.23
HOMER3-211ENST00000599808 RTF1Q92541 710 aaKnown RBP16.48■□□□□ 0.23
HOMER3-211ENST00000599808 PSMD1Q99460 953 aa16.48■□□□□ 0.23
HOMER3-211ENST00000599808 ABT1Q9ULW3 272 aaKnown RBP16.48■□□□□ 0.23
HOMER3-211ENST00000599808 ABCC12Q96J65 1359 aa16.48■□□□□ 0.23
HOMER3-211ENST00000599808 THSD7BQ9C0I4 1608 aa16.48■□□□□ 0.23
HOMER3-211ENST00000599808 GTF2E1P29083 439 aaPredicted RBP16.47■□□□□ 0.23
HOMER3-211ENST00000599808 MAP2K1Q02750 393 aaPredicted RBP16.47■□□□□ 0.23
HOMER3-211ENST00000599808 CRY2Q49AN0 593 aa16.47■□□□□ 0.23
HOMER3-211ENST00000599808 JDP2Q8WYK2 163 aa16.47■□□□□ 0.23
HOMER3-211ENST00000599808 DDX21Q9NR30 783 aaKnown RBP eCLIP16.47■□□□□ 0.23
HOMER3-211ENST00000599808 FMR1Q06787 632 aaKnown RBP eCLIP16.46■□□□□ 0.23
HOMER3-211ENST00000599808 NUTM1Q86Y26 1132 aa16.46■□□□□ 0.23
HOMER3-211ENST00000599808 ABHD8Q96I13 439 aa16.46■□□□□ 0.23
HOMER3-211ENST00000599808 CFAP53Q96M91 514 aa16.46■□□□□ 0.23
HOMER3-211ENST00000599808 GJA3Q9Y6H8 435 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms