RNA–Protein interactions for RNA: ENST00000599768.5

MAP1LC3B-209, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 5

Gene MAP1LC3B, Length 212 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-209ENST00000599768 NFKBIEO00221 500 aa23.02■■□□□ 1.28
MAP1LC3B-209ENST00000599768 THUMPD2Q9BTF0 503 aaKnown RBP23.02■■□□□ 1.28
MAP1LC3B-209ENST00000599768 TBC1D2BQ9UPU7 963 aa23.02■■□□□ 1.28
MAP1LC3B-209ENST00000599768 CARMIL3Q8ND23 1372 aa23.01■■□□□ 1.27
MAP1LC3B-209ENST00000599768 PIP4K2AP48426 406 aaPredicted RBP23■■□□□ 1.27
MAP1LC3B-209ENST00000599768 ZNF622Q969S3 477 aaKnown RBP eCLIP23■■□□□ 1.27
MAP1LC3B-209ENST00000599768 TIAM2Q8IVF5 1701 aa22.99■■□□□ 1.27
MAP1LC3B-209ENST00000599768 TBC1D9BQ66K14 1250 aa22.99■■□□□ 1.27
MAP1LC3B-209ENST00000599768 PNISRQ8TF01 805 aaKnown RBP22.99■■□□□ 1.27
MAP1LC3B-209ENST00000599768 ZNF219Q9P2Y4 722 aaPredicted RBP22.99■■□□□ 1.27
MAP1LC3B-209ENST00000599768 POTECB2RU33 542 aa22.98■■□□□ 1.27
MAP1LC3B-209ENST00000599768 CAMTA2O94983 1202 aa22.98■■□□□ 1.27
MAP1LC3B-209ENST00000599768 ERFEQ4G0M1 354 aa22.98■■□□□ 1.27
MAP1LC3B-209ENST00000599768 NBPF26B4DH59 902 aa22.97■■□□□ 1.27
MAP1LC3B-209ENST00000599768 C21orf2O43822 256 aa22.97■■□□□ 1.27
MAP1LC3B-209ENST00000599768 NBPF10Q6P3W6 841 aaKnown RBP22.97■■□□□ 1.27
MAP1LC3B-209ENST00000599768 NBPF15Q8N660 670 aa22.97■■□□□ 1.27
MAP1LC3B-209ENST00000599768 PRKRIP1Q9H875 184 aaPredicted RBP22.97■■□□□ 1.27
MAP1LC3B-209ENST00000599768 PDZRN3Q9UPQ7 1066 aa22.97■■□□□ 1.27
MAP1LC3B-209ENST00000599768 CCDC88AQ3V6T2 1871 aa22.96■■□□□ 1.27
MAP1LC3B-209ENST00000599768 PDE6BP35913 854 aa22.96■■□□□ 1.27
MAP1LC3B-209ENST00000599768 NPM2Q86SE8 214 aaKnown RBP22.96■■□□□ 1.27
MAP1LC3B-209ENST00000599768 DZIP3Q86Y13 1208 aaKnown RBP22.96■■□□□ 1.27
MAP1LC3B-209ENST00000599768 COL11A2P13942 1736 aaPredicted RBP22.96■■□□□ 1.27
MAP1LC3B-209ENST00000599768 PCNTO95613 3336 aa22.95■■□□□ 1.27
MAP1LC3B-209ENST00000599768 TMPOP42166 694 aaKnown RBP22.95■■□□□ 1.26
MAP1LC3B-209ENST00000599768 RIPK4P57078 832 aa22.95■■□□□ 1.26
MAP1LC3B-209ENST00000599768 NUP98P52948 1817 aa22.94■■□□□ 1.26
MAP1LC3B-209ENST00000599768 ZEB1P37275 1124 aaPredicted RBP22.94■■□□□ 1.26
MAP1LC3B-209ENST00000599768 EIF4A1P60842 406 aaKnown RBP22.94■■□□□ 1.26
MAP1LC3B-209ENST00000599768 BRIP1Q9BX63 1249 aa22.94■■□□□ 1.26
MAP1LC3B-209ENST00000599768 CCDC146Q8IYE0 955 aa22.93■■□□□ 1.26
MAP1LC3B-209ENST00000599768 CCDC24Q8N4L8 307 aa22.93■■□□□ 1.26
MAP1LC3B-209ENST00000599768 CACNA1SQ13698 1873 aa22.92■■□□□ 1.26
MAP1LC3B-209ENST00000599768 NPHP1O15259 732 aa22.92■■□□□ 1.26
MAP1LC3B-209ENST00000599768 CHADLQ6NUI6 762 aa22.92■■□□□ 1.26
MAP1LC3B-209ENST00000599768 CREBZFQ9NS37 354 aa22.92■■□□□ 1.26
MAP1LC3B-209ENST00000599768 MKRN1Q9UHC7 482 aaKnown RBP22.92■■□□□ 1.26
MAP1LC3B-209ENST00000599768 PRR5LQ6MZQ0 368 aa22.91■■□□□ 1.26
MAP1LC3B-209ENST00000599768 TAOK3Q9H2K8 898 aa22.91■■□□□ 1.26
MAP1LC3B-209ENST00000599768 WDR43Q15061 677 aaKnown RBP eCLIP22.9■■□□□ 1.26
MAP1LC3B-209ENST00000599768 RUNDC1Q96C34 613 aa22.9■■□□□ 1.26
MAP1LC3B-209ENST00000599768 SETDB2Q96T68 719 aa22.9■■□□□ 1.26
MAP1LC3B-209ENST00000599768 ADAMTS8Q9UP79 889 aa22.9■■□□□ 1.26
MAP1LC3B-209ENST00000599768 RRP7AQ9Y3A4 280 aaKnown RBP22.9■■□□□ 1.26
MAP1LC3B-209ENST00000599768 LTBP3Q9NS15 1303 aa22.89■■□□□ 1.26
MAP1LC3B-209ENST00000599768 DDNO94850 711 aaPredicted RBP22.89■■□□□ 1.25
MAP1LC3B-209ENST00000599768 LMOD3Q0VAK6 560 aa22.89■■□□□ 1.25
MAP1LC3B-209ENST00000599768 CLEC4GQ6UXB4 293 aa22.89■■□□□ 1.25
MAP1LC3B-209ENST00000599768 ARFGEF2Q9Y6D5 1785 aa22.89■■□□□ 1.25
MAP1LC3B-209ENST00000599768 CNKSR1Q969H4 720 aa22.88■■□□□ 1.25
MAP1LC3B-209ENST00000599768 TSPYL4Q9UJ04 414 aa22.88■■□□□ 1.25
MAP1LC3B-209ENST00000599768 RGL2O15211 777 aa22.87■■□□□ 1.25
MAP1LC3B-209ENST00000599768 POTEIP0CG38 1075 aa22.87■■□□□ 1.25
MAP1LC3B-209ENST00000599768 POTEJP0CG39 1038 aa22.87■■□□□ 1.25
MAP1LC3B-209ENST00000599768 CNBD1Q8NA66 436 aa22.87■■□□□ 1.25
MAP1LC3B-209ENST00000599768 ST5P78524 1137 aa22.86■■□□□ 1.25
MAP1LC3B-209ENST00000599768 NEUROD2Q15784 382 aa22.86■■□□□ 1.25
MAP1LC3B-209ENST00000599768 SOGA3Q5TF21 947 aa22.86■■□□□ 1.25
MAP1LC3B-209ENST00000599768 BABAM1Q9NWV8 329 aa22.86■■□□□ 1.25
MAP1LC3B-209ENST00000599768 ZNF652Q9Y2D9 606 aa22.86■■□□□ 1.25
MAP1LC3B-209ENST00000599768 FER1L6Q2WGJ9 1857 aa22.85■■□□□ 1.25
MAP1LC3B-209ENST00000599768 DICER1Q9UPY3 1922 aaKnown RBP22.85■■□□□ 1.25
MAP1LC3B-209ENST00000599768 STYK1Q6J9G0 422 aa22.85■■□□□ 1.25
MAP1LC3B-209ENST00000599768 PRPF40BQ6NWY9 871 aaKnown RBP22.85■■□□□ 1.25
MAP1LC3B-209ENST00000599768 TRIM35Q9UPQ4 493 aa22.85■■□□□ 1.25
MAP1LC3B-209ENST00000599768 IQCA1LA6NCM1 817 aa22.84■■□□□ 1.25
MAP1LC3B-209ENST00000599768 HLFQ16534 295 aa22.84■■□□□ 1.25
MAP1LC3B-209ENST00000599768 SLX4Q8IY92 1834 aa22.84■■□□□ 1.25
MAP1LC3B-209ENST00000599768 SRGNP10124 158 aa22.83■■□□□ 1.25
MAP1LC3B-209ENST00000599768 MASTLQ96GX5 879 aa22.83■■□□□ 1.25
MAP1LC3B-209ENST00000599768 CNTNAP1P78357 1384 aa22.82■■□□□ 1.24
MAP1LC3B-209ENST00000599768 FOXN1O15353 648 aa22.82■■□□□ 1.24
MAP1LC3B-209ENST00000599768 NGEFQ8N5V2 710 aa22.82■■□□□ 1.24
MAP1LC3B-209ENST00000599768 NIP7Q9Y221 180 aaKnown RBP eCLIP22.82■■□□□ 1.24
MAP1LC3B-209ENST00000599768 ERBB4Q15303 1308 aa22.82■■□□□ 1.24
MAP1LC3B-209ENST00000599768 MYL6BP14649 208 aa22.81■■□□□ 1.24
MAP1LC3B-209ENST00000599768 LDHDQ86WU2 507 aa22.81■■□□□ 1.24
MAP1LC3B-209ENST00000599768 NBPF5PQ86XG9 351 aaPredicted RBP22.81■■□□□ 1.24
MAP1LC3B-209ENST00000599768 ERVV-1B6SEH8 477 aa22.8■■□□□ 1.24
MAP1LC3B-209ENST00000599768 CHL1O00533 1208 aa22.8■■□□□ 1.24
MAP1LC3B-209ENST00000599768 TTLL7Q6ZT98 887 aa22.8■■□□□ 1.24
MAP1LC3B-209ENST00000599768 AIDAQ96BJ3 306 aa22.8■■□□□ 1.24
MAP1LC3B-209ENST00000599768 MAP3K15Q6ZN16 1313 aa22.8■■□□□ 1.24
MAP1LC3B-209ENST00000599768 ANKRD36CQ5JPF3 1778 aa22.79■■□□□ 1.24
MAP1LC3B-209ENST00000599768 TAF1DQ9H5J8 278 aaPredicted RBP22.79■■□□□ 1.24
MAP1LC3B-209ENST00000599768 PASKQ96RG2 1323 aa22.79■■□□□ 1.24
MAP1LC3B-209ENST00000599768 PDIA6Q15084 440 aa22.78■■□□□ 1.24
MAP1LC3B-209ENST00000599768 CCDC93Q567U6 631 aa22.78■■□□□ 1.24
MAP1LC3B-209ENST00000599768 EAPPQ56P03 285 aaPredicted RBP22.78■■□□□ 1.24
MAP1LC3B-209ENST00000599768 KIF6Q6ZMV9 814 aa22.78■■□□□ 1.24
MAP1LC3B-209ENST00000599768 LRP10Q7Z4F1 713 aa22.78■■□□□ 1.24
MAP1LC3B-209ENST00000599768 L3MBTL3Q96JM7 780 aaPredicted RBP22.78■■□□□ 1.24
MAP1LC3B-209ENST00000599768 PRDM10Q9NQV6 1147 aa22.78■■□□□ 1.24
MAP1LC3B-209ENST00000599768 TMEM88BA6NKF7 163 aa22.77■■□□□ 1.24
MAP1LC3B-209ENST00000599768 EIF2S2P20042 333 aaKnown RBP22.77■■□□□ 1.24
MAP1LC3B-209ENST00000599768 TPTE2Q6XPS3 522 aa22.77■■□□□ 1.24
MAP1LC3B-209ENST00000599768 CTCFP49711 727 aaPredicted RBP22.76■■□□□ 1.23
MAP1LC3B-209ENST00000599768 ZNF316A6NFI3 1004 aaPredicted RBP22.75■■□□□ 1.23
MAP1LC3B-209ENST00000599768 FAM177BA6PVY3 158 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms