RNA–Protein interactions for RNA: ENST00000599514.1

PPFIA4-209, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 4

Gene PPFIA4, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-209ENST00000599514 NPHP1O15259 732 aa17.45■□□□□ 0.38
PPFIA4-209ENST00000599514 NPM2Q86SE8 214 aaKnown RBP17.45■□□□□ 0.38
PPFIA4-209ENST00000599514 C7orf43Q8WVR3 580 aa17.45■□□□□ 0.38
PPFIA4-209ENST00000599514 FMNL2Q96PY5 1086 aa17.45■□□□□ 0.38
PPFIA4-209ENST00000599514 DICER1Q9UPY3 1922 aaKnown RBP17.45■□□□□ 0.38
PPFIA4-209ENST00000599514 ITGBL1O95965 494 aaPredicted RBP17.44■□□□□ 0.38
PPFIA4-209ENST00000599514 TMEM88BA6NKF7 163 aa17.43■□□□□ 0.38
PPFIA4-209ENST00000599514 CTCFP49711 727 aaPredicted RBP17.43■□□□□ 0.38
PPFIA4-209ENST00000599514 VEGFBP49765 207 aa17.43■□□□□ 0.38
PPFIA4-209ENST00000599514 DZIP3Q86Y13 1208 aaKnown RBP17.43■□□□□ 0.38
PPFIA4-209ENST00000599514 GAS2L2Q8NHY3 880 aa17.43■□□□□ 0.38
PPFIA4-209ENST00000599514 CCDC93Q567U6 631 aa17.42■□□□□ 0.38
PPFIA4-209ENST00000599514 AIDAQ96BJ3 306 aa17.42■□□□□ 0.38
PPFIA4-209ENST00000599514 SLX4Q8IY92 1834 aa17.42■□□□□ 0.38
PPFIA4-209ENST00000599514 KLRG2A4D1S0 409 aaPredicted RBP17.41■□□□□ 0.38
PPFIA4-209ENST00000599514 PER1O15534 1290 aaPredicted RBP17.41■□□□□ 0.38
PPFIA4-209ENST00000599514 CLEC4GQ6UXB4 293 aa17.41■□□□□ 0.38
PPFIA4-209ENST00000599514 WBP1LQ9NX94 342 aa17.41■□□□□ 0.38
PPFIA4-209ENST00000599514 VIRMAQ69YN4 1812 aaKnown RBP17.41■□□□□ 0.38
PPFIA4-209ENST00000599514 CEMIPQ8WUJ3 1361 aa17.4■□□□□ 0.38
PPFIA4-209ENST00000599514 KCNQ3O43525 872 aa17.4■□□□□ 0.38
PPFIA4-209ENST00000599514 NPR1P16066 1061 aa17.4■□□□□ 0.38
PPFIA4-209ENST00000599514 FKBP4Q02790 459 aaKnown RBP eCLIP17.4■□□□□ 0.38
PPFIA4-209ENST00000599514 NBPF5PQ86XG9 351 aaPredicted RBP17.4■□□□□ 0.38
PPFIA4-209ENST00000599514 HACL1Q9UJ83 578 aa17.4■□□□□ 0.38
PPFIA4-209ENST00000599514 ZNF541Q9H0D2 1346 aa17.4■□□□□ 0.38
PPFIA4-209ENST00000599514 U2SURPO15042 1029 aaKnown RBP17.39■□□□□ 0.37
PPFIA4-209ENST00000599514 EAPPQ56P03 285 aaPredicted RBP17.39■□□□□ 0.37
PPFIA4-209ENST00000599514 CC2D1BQ5T0F9 858 aaKnown RBP17.39■□□□□ 0.37
PPFIA4-209ENST00000599514 PCGF6Q9BYE7 350 aa17.39■□□□□ 0.37
PPFIA4-209ENST00000599514 ZNF277Q9NRM2 450 aaPredicted RBP17.39■□□□□ 0.37
PPFIA4-209ENST00000599514 USP16Q9Y5T5 823 aa17.39■□□□□ 0.37
PPFIA4-209ENST00000599514 BTBD11A6QL63 1104 aa17.38■□□□□ 0.37
PPFIA4-209ENST00000599514 CLEC11AQ9Y240 323 aa17.38■□□□□ 0.37
PPFIA4-209ENST00000599514 KIF7Q2M1P5 1343 aa17.38■□□□□ 0.37
PPFIA4-209ENST00000599514 COL3A1P02461 1466 aaPredicted RBP17.37■□□□□ 0.37
PPFIA4-209ENST00000599514 RASSF10A6NK89 507 aa17.37■□□□□ 0.37
PPFIA4-209ENST00000599514 EPHX2P34913 555 aa17.37■□□□□ 0.37
PPFIA4-209ENST00000599514 PIP4K2AP48426 406 aaPredicted RBP17.37■□□□□ 0.37
PPFIA4-209ENST00000599514 LBX1P52954 281 aa17.37■□□□□ 0.37
PPFIA4-209ENST00000599514 TPTE2Q6XPS3 522 aa17.37■□□□□ 0.37
PPFIA4-209ENST00000599514 PNMA8AQ86V59 439 aaPredicted RBP17.37■□□□□ 0.37
PPFIA4-209ENST00000599514 RTKN2Q8IZC4 609 aa17.37■□□□□ 0.37
PPFIA4-209ENST00000599514 ZNF652Q9Y2D9 606 aa17.37■□□□□ 0.37
PPFIA4-209ENST00000599514 SCN4AP35499 1836 aa17.37■□□□□ 0.37
PPFIA4-209ENST00000599514 ARFGEF2Q9Y6D5 1785 aa17.36■□□□□ 0.37
PPFIA4-209ENST00000599514 FZD9O00144 591 aa17.36■□□□□ 0.37
PPFIA4-209ENST00000599514 DEFB115Q30KQ5 88 aa17.36■□□□□ 0.37
PPFIA4-209ENST00000599514 OLFM4Q6UX06 510 aa17.36■□□□□ 0.37
PPFIA4-209ENST00000599514 CNTROBQ8N137 903 aa17.36■□□□□ 0.37
PPFIA4-209ENST00000599514 SIPA1L3O60292 1781 aaPredicted RBP17.35■□□□□ 0.37
PPFIA4-209ENST00000599514 PRAMEF22A3QJZ6 481 aa17.35■□□□□ 0.37
PPFIA4-209ENST00000599514 RGL2O15211 777 aa17.35■□□□□ 0.37
PPFIA4-209ENST00000599514 PHACTR3Q96KR7 559 aa17.35■□□□□ 0.37
PPFIA4-209ENST00000599514 IARSP41252 1262 aaKnown RBP17.34■□□□□ 0.37
PPFIA4-209ENST00000599514 RNF123Q5XPI4 1314 aa17.34■□□□□ 0.37
PPFIA4-209ENST00000599514 MAP1SQ66K74 1059 aaPredicted RBP17.34■□□□□ 0.37
PPFIA4-209ENST00000599514 BCORQ6W2J9 1755 aa17.34■□□□□ 0.37
PPFIA4-209ENST00000599514 NIP7Q9Y221 180 aaKnown RBP eCLIP17.34■□□□□ 0.37
PPFIA4-209ENST00000599514 ADAMTSL1Q8N6G6 1762 aa17.33■□□□□ 0.37
PPFIA4-209ENST00000599514 SNRPA1P09661 255 aaKnown RBP17.33■□□□□ 0.36
PPFIA4-209ENST00000599514 HSPA8P11142 646 aaKnown RBP17.33■□□□□ 0.36
PPFIA4-209ENST00000599514 ALDH1B1P30837 517 aa17.33■□□□□ 0.36
PPFIA4-209ENST00000599514 MAP2K1Q02750 393 aaPredicted RBP17.33■□□□□ 0.36
PPFIA4-209ENST00000599514 GPC2Q8N158 579 aa17.33■□□□□ 0.36
PPFIA4-209ENST00000599514 SYNE4Q8N205 404 aa17.33■□□□□ 0.36
PPFIA4-209ENST00000599514 NPC1L1Q9UHC9 1359 aa17.32■□□□□ 0.36
PPFIA4-209ENST00000599514 WDR33Q9C0J8 1336 aaKnown RBP17.32■□□□□ 0.36
PPFIA4-209ENST00000599514 NBPF26B4DH59 902 aa17.32■□□□□ 0.36
PPFIA4-209ENST00000599514 NBPF10Q6P3W6 841 aaKnown RBP17.32■□□□□ 0.36
PPFIA4-209ENST00000599514 NBPF15Q8N660 670 aa17.32■□□□□ 0.36
PPFIA4-209ENST00000599514 ABHD8Q96I13 439 aa17.32■□□□□ 0.36
PPFIA4-209ENST00000599514 PRKAR2BP31323 418 aa17.31■□□□□ 0.36
PPFIA4-209ENST00000599514 PSMD1Q99460 953 aa17.31■□□□□ 0.36
PPFIA4-209ENST00000599514 RSPH6AQ9H0K4 717 aa17.31■□□□□ 0.36
PPFIA4-209ENST00000599514 CACNA1SQ13698 1873 aa17.31■□□□□ 0.36
PPFIA4-209ENST00000599514 SNED1Q8TER0 1413 aa17.3■□□□□ 0.36
PPFIA4-209ENST00000599514 FAM177BA6PVY3 158 aa17.3■□□□□ 0.36
PPFIA4-209ENST00000599514 JDP2Q8WYK2 163 aa17.3■□□□□ 0.36
PPFIA4-209ENST00000599514 DDX21Q9NR30 783 aaKnown RBP eCLIP17.3■□□□□ 0.36
PPFIA4-209ENST00000599514 ABT1Q9ULW3 272 aaKnown RBP17.3■□□□□ 0.36
PPFIA4-209ENST00000599514 SLC34A2O95436 690 aa17.29■□□□□ 0.36
PPFIA4-209ENST00000599514 HLFQ16534 295 aa17.29■□□□□ 0.36
PPFIA4-209ENST00000599514 CRY2Q49AN0 593 aa17.29■□□□□ 0.36
PPFIA4-209ENST00000599514 GTF2E1P29083 439 aaPredicted RBP17.28■□□□□ 0.36
PPFIA4-209ENST00000599514 CC2D2BQ6DHV5 1058 aa17.28■□□□□ 0.36
PPFIA4-209ENST00000599514 EIF6P56537 245 aaKnown RBP17.27■□□□□ 0.36
PPFIA4-209ENST00000599514 MCM10Q7L590 875 aa17.27■□□□□ 0.36
PPFIA4-209ENST00000599514 RTF1Q92541 710 aaKnown RBP17.27■□□□□ 0.36
PPFIA4-209ENST00000599514 LMOD1P29536 600 aaPredicted RBP17.26■□□□□ 0.35
PPFIA4-209ENST00000599514 CNGB1Q14028 1251 aaPredicted RBP17.26■□□□□ 0.35
PPFIA4-209ENST00000599514 FAM161AQ3B820 660 aa17.26■□□□□ 0.35
PPFIA4-209ENST00000599514 CAPNS2Q96L46 248 aa17.26■□□□□ 0.35
PPFIA4-209ENST00000599514 GJA3Q9Y6H8 435 aa17.26■□□□□ 0.35
PPFIA4-209ENST00000599514 ECE1P42892 770 aa17.25■□□□□ 0.35
PPFIA4-209ENST00000599514 SCNN1DP51172 638 aa17.25■□□□□ 0.35
PPFIA4-209ENST00000599514 FMR1Q06787 632 aaKnown RBP eCLIP17.25■□□□□ 0.35
PPFIA4-209ENST00000599514 NYXQ9GZU5 481 aa17.25■□□□□ 0.35
PPFIA4-209ENST00000599514 ABCC12Q96J65 1359 aa17.25■□□□□ 0.35
PPFIA4-209ENST00000599514 COL4A5P29400 1685 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms