RNA–Protein interactions for RNA: ENST00000599144.5

IRF3-222, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-222ENST00000599144 U2AF1L5P0DN76 240 aaPredicted RBP25.74■■□□□ 1.71
IRF3-222ENST00000599144 ST5P78524 1137 aa25.74■■□□□ 1.71
IRF3-222ENST00000599144 U2AF1Q01081 240 aaKnown RBP eCLIP25.74■■□□□ 1.71
IRF3-222ENST00000599144 DPY19L2Q6NUT2 758 aa25.74■■□□□ 1.71
IRF3-222ENST00000599144 CFAP53Q96M91 514 aa25.74■■□□□ 1.71
IRF3-222ENST00000599144 TAOK3Q9H2K8 898 aa25.74■■□□□ 1.71
IRF3-222ENST00000599144 FAM177BA6PVY3 158 aa25.73■■□□□ 1.71
IRF3-222ENST00000599144 SRGNP10124 158 aa25.73■■□□□ 1.71
IRF3-222ENST00000599144 PDZRN3Q9UPQ7 1066 aa25.72■■□□□ 1.71
IRF3-222ENST00000599144 NBPF26B4DH59 902 aa25.71■■□□□ 1.71
IRF3-222ENST00000599144 STYK1Q6J9G0 422 aa25.71■■□□□ 1.71
IRF3-222ENST00000599144 NBPF10Q6P3W6 841 aaKnown RBP25.71■■□□□ 1.71
IRF3-222ENST00000599144 OLFM4Q6UX06 510 aa25.71■■□□□ 1.71
IRF3-222ENST00000599144 NBPF5PQ86XG9 351 aaPredicted RBP25.71■■□□□ 1.71
IRF3-222ENST00000599144 NBPF15Q8N660 670 aa25.71■■□□□ 1.71
IRF3-222ENST00000599144 CNKSR1Q969H4 720 aa25.71■■□□□ 1.71
IRF3-222ENST00000599144 PPP2R1AP30153 589 aa25.7■■□□□ 1.7
IRF3-222ENST00000599144 MASTLQ96GX5 879 aa25.7■■□□□ 1.7
IRF3-222ENST00000599144 MIS18AQ9NYP9 233 aa25.7■■□□□ 1.7
IRF3-222ENST00000599144 SNRPA1P09661 255 aaKnown RBP25.69■■□□□ 1.7
IRF3-222ENST00000599144 HSPA1AP0DMV8 641 aaKnown RBP25.69■■□□□ 1.7
IRF3-222ENST00000599144 HSPA1BP0DMV9 641 aaKnown RBP25.69■■□□□ 1.7
IRF3-222ENST00000599144 RTF1Q92541 710 aaKnown RBP25.69■■□□□ 1.7
IRF3-222ENST00000599144 NUDCQ9Y266 331 aa25.68■■□□□ 1.7
IRF3-222ENST00000599144 SLX4Q8IY92 1834 aa25.67■■□□□ 1.7
IRF3-222ENST00000599144 LTBP3Q9NS15 1303 aa25.67■■□□□ 1.7
IRF3-222ENST00000599144 CCDC88AQ3V6T2 1871 aa25.67■■□□□ 1.7
IRF3-222ENST00000599144 NIP7Q9Y221 180 aaKnown RBP eCLIP25.66■■□□□ 1.7
IRF3-222ENST00000599144 BCORQ6W2J9 1755 aa25.65■■□□□ 1.7
IRF3-222ENST00000599144 HLFQ16534 295 aa25.65■■□□□ 1.7
IRF3-222ENST00000599144 TNS4Q8IZW8 715 aa25.65■■□□□ 1.7
IRF3-222ENST00000599144 C7orf43Q8WVR3 580 aa25.65■■□□□ 1.7
IRF3-222ENST00000599144 MKRN1Q9UHC7 482 aaKnown RBP25.65■■□□□ 1.7
IRF3-222ENST00000599144 CHADLQ6NUI6 762 aa25.64■■□□□ 1.7
IRF3-222ENST00000599144 NGEFQ8N5V2 710 aa25.64■■□□□ 1.7
IRF3-222ENST00000599144 ZNF277Q9NRM2 450 aaPredicted RBP25.64■■□□□ 1.7
IRF3-222ENST00000599144 FER1L6Q2WGJ9 1857 aa25.64■■□□□ 1.69
IRF3-222ENST00000599144 ZNF652Q9Y2D9 606 aa25.63■■□□□ 1.69
IRF3-222ENST00000599144 CCDC93Q567U6 631 aa25.62■■□□□ 1.69
IRF3-222ENST00000599144 CLEC4GQ6UXB4 293 aa25.62■■□□□ 1.69
IRF3-222ENST00000599144 ZNF541Q9H0D2 1346 aa25.62■■□□□ 1.69
IRF3-222ENST00000599144 NPR1P16066 1061 aa25.61■■□□□ 1.69
IRF3-222ENST00000599144 SOGA3Q5TF21 947 aa25.6■■□□□ 1.69
IRF3-222ENST00000599144 TPTE2Q6XPS3 522 aa25.59■■□□□ 1.69
IRF3-222ENST00000599144 SLC51AQ86UW1 340 aa25.59■■□□□ 1.69
IRF3-222ENST00000599144 CACNA1SQ13698 1873 aa25.59■■□□□ 1.69
IRF3-222ENST00000599144 KLRG2A4D1S0 409 aaPredicted RBP25.58■■□□□ 1.69
IRF3-222ENST00000599144 FKBP4Q02790 459 aaKnown RBP eCLIP25.58■■□□□ 1.69
IRF3-222ENST00000599144 TAF7Q15545 349 aaPredicted RBP25.58■■□□□ 1.69
IRF3-222ENST00000599144 THUMPD2Q9BTF0 503 aaKnown RBP25.58■■□□□ 1.69
IRF3-222ENST00000599144 NUTM1Q86Y26 1132 aa25.57■■□□□ 1.68
IRF3-222ENST00000599144 TAF1DQ9H5J8 278 aaPredicted RBP25.57■■□□□ 1.68
IRF3-222ENST00000599144 ABCC12Q96J65 1359 aa25.56■■□□□ 1.68
IRF3-222ENST00000599144 EAPPQ56P03 285 aaPredicted RBP25.56■■□□□ 1.68
IRF3-222ENST00000599144 CREBZFQ9NS37 354 aa25.56■■□□□ 1.68
IRF3-222ENST00000599144 HTATSF1O43719 755 aaKnown RBP25.55■■□□□ 1.68
IRF3-222ENST00000599144 GTF2E1P29083 439 aaPredicted RBP25.55■■□□□ 1.68
IRF3-222ENST00000599144 TTLL7Q6ZT98 887 aa25.55■■□□□ 1.68
IRF3-222ENST00000599144 RRP7AQ9Y3A4 280 aaKnown RBP25.55■■□□□ 1.68
IRF3-222ENST00000599144 SYNE4Q8N205 404 aa25.54■■□□□ 1.68
IRF3-222ENST00000599144 L3MBTL3Q96JM7 780 aaPredicted RBP25.54■■□□□ 1.68
IRF3-222ENST00000599144 DICER1Q9UPY3 1922 aaKnown RBP25.54■■□□□ 1.68
IRF3-222ENST00000599144 IQCA1LA6NCM1 817 aa25.53■■□□□ 1.68
IRF3-222ENST00000599144 MYL6BP14649 208 aa25.52■■□□□ 1.68
IRF3-222ENST00000599144 GPTP24298 496 aa25.52■■□□□ 1.68
IRF3-222ENST00000599144 LDHDQ86WU2 507 aa25.52■■□□□ 1.68
IRF3-222ENST00000599144 PASKQ96RG2 1323 aa25.52■■□□□ 1.68
IRF3-222ENST00000599144 ARFGEF2Q9Y6D5 1785 aa25.51■■□□□ 1.67
IRF3-222ENST00000599144 PCNTO95613 3336 aa25.51■■□□□ 1.67
IRF3-222ENST00000599144 IARSP41252 1262 aaKnown RBP25.51■■□□□ 1.67
IRF3-222ENST00000599144 ZBTB3Q9H5J0 574 aa25.51■■□□□ 1.67
IRF3-222ENST00000599144 CLEC11AQ9Y240 323 aa25.51■■□□□ 1.67
IRF3-222ENST00000599144 RNF123Q5XPI4 1314 aa25.51■■□□□ 1.67
IRF3-222ENST00000599144 RTKN2Q8IZC4 609 aa25.5■■□□□ 1.67
IRF3-222ENST00000599144 TCERG1O14776 1098 aaKnown RBP25.49■■□□□ 1.67
IRF3-222ENST00000599144 EIF4A1P60842 406 aaKnown RBP25.49■■□□□ 1.67
IRF3-222ENST00000599144 HACL1Q9UJ83 578 aa25.49■■□□□ 1.67
IRF3-222ENST00000599144 CNTNAP1P78357 1384 aa25.48■■□□□ 1.67
IRF3-222ENST00000599144 UBN2Q6ZU65 1347 aa25.48■■□□□ 1.67
IRF3-222ENST00000599144 ITGBL1O95965 494 aaPredicted RBP25.48■■□□□ 1.67
IRF3-222ENST00000599144 ALDH1B1P30837 517 aa25.48■■□□□ 1.67
IRF3-222ENST00000599144 EPHX2P34913 555 aa25.48■■□□□ 1.67
IRF3-222ENST00000599144 MAP3K15Q6ZN16 1313 aa25.47■■□□□ 1.67
IRF3-222ENST00000599144 RGL2O15211 777 aa25.47■■□□□ 1.67
IRF3-222ENST00000599144 SUSD4Q5VX71 490 aa25.47■■□□□ 1.67
IRF3-222ENST00000599144 MAP1SQ66K74 1059 aaPredicted RBP25.47■■□□□ 1.67
IRF3-222ENST00000599144 C3orf67Q6ZVT6 689 aa25.47■■□□□ 1.67
IRF3-222ENST00000599144 PLEKHF1Q96S99 279 aa25.47■■□□□ 1.67
IRF3-222ENST00000599144 FZD9O00144 591 aa25.46■■□□□ 1.67
IRF3-222ENST00000599144 FOXN1O15353 648 aa25.46■■□□□ 1.67
IRF3-222ENST00000599144 CRY2Q49AN0 593 aa25.46■■□□□ 1.67
IRF3-222ENST00000599144 KIF6Q6ZMV9 814 aa25.46■■□□□ 1.67
IRF3-222ENST00000599144 SNED1Q8TER0 1413 aa25.46■■□□□ 1.67
IRF3-222ENST00000599144 COL4A5P29400 1685 aa25.45■■□□□ 1.67
IRF3-222ENST00000599144 VEGFBP49765 207 aa25.45■■□□□ 1.66
IRF3-222ENST00000599144 GJA3Q9Y6H8 435 aa25.45■■□□□ 1.66
IRF3-222ENST00000599144 ERVV-1B6SEH8 477 aa25.44■■□□□ 1.66
IRF3-222ENST00000599144 NFE2L2Q16236 605 aa25.44■■□□□ 1.66
IRF3-222ENST00000599144 PNISRQ8TF01 805 aaKnown RBP25.44■■□□□ 1.66
IRF3-222ENST00000599144 NYXQ9GZU5 481 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms