RNA–Protein interactions for RNA: ENST00000598684.5

CAPN12-210, Transcript of calpain 12, humanhuman

TSL 4

Gene CAPN12, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-210ENST00000598684 PRKRIP1Q9H875 184 aaPredicted RBP21.79■■□□□ 1.08
CAPN12-210ENST00000598684 SRGNP10124 158 aa21.78■■□□□ 1.08
CAPN12-210ENST00000598684 VEGFBP49765 207 aa21.78■■□□□ 1.08
CAPN12-210ENST00000598684 ST5P78524 1137 aa21.78■■□□□ 1.08
CAPN12-210ENST00000598684 SOGA3Q5TF21 947 aa21.78■■□□□ 1.08
CAPN12-210ENST00000598684 DIEXFQ68CQ4 756 aaKnown RBP21.78■■□□□ 1.08
CAPN12-210ENST00000598684 TAF1DQ9H5J8 278 aaPredicted RBP21.78■■□□□ 1.08
CAPN12-210ENST00000598684 SLX4Q8IY92 1834 aa21.78■■□□□ 1.08
CAPN12-210ENST00000598684 HEG1Q9ULI3 1381 aa21.77■■□□□ 1.08
CAPN12-210ENST00000598684 IL6STP40189 918 aaPredicted RBP21.77■■□□□ 1.08
CAPN12-210ENST00000598684 CNGB1Q14028 1251 aaPredicted RBP21.77■■□□□ 1.08
CAPN12-210ENST00000598684 NPM2Q86SE8 214 aaKnown RBP21.77■■□□□ 1.08
CAPN12-210ENST00000598684 TMEM88BA6NKF7 163 aa21.76■■□□□ 1.07
CAPN12-210ENST00000598684 TEFQ10587 303 aa21.76■■□□□ 1.07
CAPN12-210ENST00000598684 CACNA1SQ13698 1873 aa21.76■■□□□ 1.07
CAPN12-210ENST00000598684 EAPPQ56P03 285 aaPredicted RBP21.76■■□□□ 1.07
CAPN12-210ENST00000598684 MASTLQ96GX5 879 aa21.76■■□□□ 1.07
CAPN12-210ENST00000598684 TEX13AQ9BXU3 409 aaPredicted RBP21.76■■□□□ 1.07
CAPN12-210ENST00000598684 MYBBP1AQ9BQG0 1328 aaKnown RBP21.76■■□□□ 1.07
CAPN12-210ENST00000598684 A1BGP04217 495 aa21.75■■□□□ 1.07
CAPN12-210ENST00000598684 ZNF790Q6PG37 636 aa21.75■■□□□ 1.07
CAPN12-210ENST00000598684 L3MBTL3Q96JM7 780 aaPredicted RBP21.75■■□□□ 1.07
CAPN12-210ENST00000598684 DIAPH1O60610 1272 aaKnown RBP21.74■■□□□ 1.07
CAPN12-210ENST00000598684 CAMTA2O94983 1202 aa21.74■■□□□ 1.07
CAPN12-210ENST00000598684 LBX1P52954 281 aa21.74■■□□□ 1.07
CAPN12-210ENST00000598684 CLEC11AQ9Y240 323 aa21.74■■□□□ 1.07
CAPN12-210ENST00000598684 ITGBL1O95965 494 aaPredicted RBP21.73■■□□□ 1.07
CAPN12-210ENST00000598684 PPP2R1AP30153 589 aa21.73■■□□□ 1.07
CAPN12-210ENST00000598684 CCDC93Q567U6 631 aa21.73■■□□□ 1.07
CAPN12-210ENST00000598684 WBP1LQ9NX94 342 aa21.73■■□□□ 1.07
CAPN12-210ENST00000598684 SCN4AP35499 1836 aa21.72■■□□□ 1.07
CAPN12-210ENST00000598684 IL17REQ8NFR9 667 aa21.72■■□□□ 1.07
CAPN12-210ENST00000598684 ZNF541Q9H0D2 1346 aa21.72■■□□□ 1.07
CAPN12-210ENST00000598684 ARFGEF2Q9Y6D5 1785 aa21.71■■□□□ 1.07
CAPN12-210ENST00000598684 DZIP3Q86Y13 1208 aaKnown RBP21.71■■□□□ 1.07
CAPN12-210ENST00000598684 C7orf43Q8WVR3 580 aa21.71■■□□□ 1.07
CAPN12-210ENST00000598684 FMNL2Q96PY5 1086 aa21.71■■□□□ 1.07
CAPN12-210ENST00000598684 ZNF277Q9NRM2 450 aaPredicted RBP21.71■■□□□ 1.07
CAPN12-210ENST00000598684 HACL1Q9UJ83 578 aa21.71■■□□□ 1.07
CAPN12-210ENST00000598684 GNAT3A8MTJ3 354 aa21.69■■□□□ 1.06
CAPN12-210ENST00000598684 EPHX2P34913 555 aa21.69■■□□□ 1.06
CAPN12-210ENST00000598684 FKBP4Q02790 459 aaKnown RBP eCLIP21.69■■□□□ 1.06
CAPN12-210ENST00000598684 NBPF5PQ86XG9 351 aaPredicted RBP21.69■■□□□ 1.06
CAPN12-210ENST00000598684 NPR1P16066 1061 aa21.68■■□□□ 1.06
CAPN12-210ENST00000598684 PIP4K2AP48426 406 aaPredicted RBP21.68■■□□□ 1.06
CAPN12-210ENST00000598684 MAP1SQ66K74 1059 aaPredicted RBP21.68■■□□□ 1.06
CAPN12-210ENST00000598684 CFAP53Q96M91 514 aa21.68■■□□□ 1.06
CAPN12-210ENST00000598684 COL3A1P02461 1466 aaPredicted RBP21.68■■□□□ 1.06
CAPN12-210ENST00000598684 BCORQ6W2J9 1755 aa21.68■■□□□ 1.06
CAPN12-210ENST00000598684 RNF123Q5XPI4 1314 aa21.67■■□□□ 1.06
CAPN12-210ENST00000598684 HSPA8P11142 646 aaKnown RBP21.67■■□□□ 1.06
CAPN12-210ENST00000598684 DEFB115Q30KQ5 88 aa21.67■■□□□ 1.06
CAPN12-210ENST00000598684 OLFM4Q6UX06 510 aa21.67■■□□□ 1.06
CAPN12-210ENST00000598684 CNTROBQ8N137 903 aa21.67■■□□□ 1.06
CAPN12-210ENST00000598684 GAS2L2Q8NHY3 880 aa21.67■■□□□ 1.06
CAPN12-210ENST00000598684 ABHD8Q96I13 439 aa21.67■■□□□ 1.06
CAPN12-210ENST00000598684 RASSF10A6NK89 507 aa21.66■■□□□ 1.06
CAPN12-210ENST00000598684 U2SURPO15042 1029 aaKnown RBP21.66■■□□□ 1.06
CAPN12-210ENST00000598684 KCNQ3O43525 872 aa21.66■■□□□ 1.06
CAPN12-210ENST00000598684 SLC34A2O95436 690 aa21.66■■□□□ 1.06
CAPN12-210ENST00000598684 PNMA8AQ86V59 439 aaPredicted RBP21.66■■□□□ 1.06
CAPN12-210ENST00000598684 ABT1Q9ULW3 272 aaKnown RBP21.66■■□□□ 1.06
CAPN12-210ENST00000598684 SIPA1L3O60292 1781 aaPredicted RBP21.66■■□□□ 1.06
CAPN12-210ENST00000598684 FAM161AQ3B820 660 aa21.65■■□□□ 1.06
CAPN12-210ENST00000598684 ADAMTSL1Q8N6G6 1762 aa21.65■■□□□ 1.06
CAPN12-210ENST00000598684 WDR33Q9C0J8 1336 aaKnown RBP21.64■■□□□ 1.05
CAPN12-210ENST00000598684 RTKN2Q8IZC4 609 aa21.64■■□□□ 1.05
CAPN12-210ENST00000598684 ZNF652Q9Y2D9 606 aa21.64■■□□□ 1.05
CAPN12-210ENST00000598684 USP16Q9Y5T5 823 aa21.64■■□□□ 1.05
CAPN12-210ENST00000598684 BTBD11A6QL63 1104 aa21.63■■□□□ 1.05
CAPN12-210ENST00000598684 IARSP41252 1262 aaKnown RBP21.63■■□□□ 1.05
CAPN12-210ENST00000598684 MAP2K1Q02750 393 aaPredicted RBP21.63■■□□□ 1.05
CAPN12-210ENST00000598684 CLEC4GQ6UXB4 293 aa21.63■■□□□ 1.05
CAPN12-210ENST00000598684 FAM177BA6PVY3 158 aa21.62■■□□□ 1.05
CAPN12-210ENST00000598684 TPTE2Q6XPS3 522 aa21.62■■□□□ 1.05
CAPN12-210ENST00000598684 PRAMEF22A3QJZ6 481 aa21.61■■□□□ 1.05
CAPN12-210ENST00000598684 KLRG2A4D1S0 409 aaPredicted RBP21.61■■□□□ 1.05
CAPN12-210ENST00000598684 FZD9O00144 591 aa21.61■■□□□ 1.05
CAPN12-210ENST00000598684 GPC2Q8N158 579 aa21.61■■□□□ 1.05
CAPN12-210ENST00000598684 SYNE4Q8N205 404 aa21.61■■□□□ 1.05
CAPN12-210ENST00000598684 NIP7Q9Y221 180 aaKnown RBP eCLIP21.61■■□□□ 1.05
CAPN12-210ENST00000598684 CEMIPQ8WUJ3 1361 aa21.61■■□□□ 1.05
CAPN12-210ENST00000598684 PAXIP1Q6ZW49 1069 aaPredicted RBP21.59■■□□□ 1.05
CAPN12-210ENST00000598684 GJA3Q9Y6H8 435 aa21.59■■□□□ 1.05
CAPN12-210ENST00000598684 GRM1Q13255 1194 aa21.58■■□□□ 1.05
CAPN12-210ENST00000598684 JDP2Q8WYK2 163 aa21.58■■□□□ 1.05
CAPN12-210ENST00000598684 DDX21Q9NR30 783 aaKnown RBP eCLIP21.58■■□□□ 1.05
CAPN12-210ENST00000598684 GTF2E1P29083 439 aaPredicted RBP21.57■■□□□ 1.04
CAPN12-210ENST00000598684 ALDH1B1P30837 517 aa21.57■■□□□ 1.04
CAPN12-210ENST00000598684 CCDC85CA6NKD9 419 aa21.56■■□□□ 1.04
CAPN12-210ENST00000598684 SNRPA1P09661 255 aaKnown RBP21.56■■□□□ 1.04
CAPN12-210ENST00000598684 FMR1Q06787 632 aaKnown RBP eCLIP21.56■■□□□ 1.04
CAPN12-210ENST00000598684 PHACTR3Q96KR7 559 aa21.56■■□□□ 1.04
CAPN12-210ENST00000598684 CAPNS2Q96L46 248 aa21.56■■□□□ 1.04
CAPN12-210ENST00000598684 BEGAINQ9BUH8 593 aa21.56■■□□□ 1.04
CAPN12-210ENST00000598684 NUDCQ9Y266 331 aa21.56■■□□□ 1.04
CAPN12-210ENST00000598684 CCER2I3L3R5 266 aa21.55■■□□□ 1.04
CAPN12-210ENST00000598684 LMOD1P29536 600 aaPredicted RBP21.55■■□□□ 1.04
CAPN12-210ENST00000598684 EIF6P56537 245 aaKnown RBP21.55■■□□□ 1.04
CAPN12-210ENST00000598684 NBPF26B4DH59 902 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms