RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 ERVV-1B6SEH8 477 aa23.43■■□□□ 1.34
IRF3-216ENST00000597180 ANXA1P04083 346 aa23.43■■□□□ 1.34
IRF3-216ENST00000597180 TTLL7Q6ZT98 887 aa23.43■■□□□ 1.34
IRF3-216ENST00000597180 TSPYL6Q8N831 410 aa23.43■■□□□ 1.34
IRF3-216ENST00000597180 CHPF2Q9P2E5 772 aa23.43■■□□□ 1.34
IRF3-216ENST00000597180 ZNF652Q9Y2D9 606 aa23.43■■□□□ 1.34
IRF3-216ENST00000597180 ANKRD36CQ5JPF3 1778 aa23.42■■□□□ 1.34
IRF3-216ENST00000597180 MAP3K15Q6ZN16 1313 aa23.42■■□□□ 1.34
IRF3-216ENST00000597180 ELL2O00472 640 aaPredicted RBP23.42■■□□□ 1.34
IRF3-216ENST00000597180 DBF4Q9UBU7 674 aaPredicted RBP23.42■■□□□ 1.34
IRF3-216ENST00000597180 GOLGA2Q08379 1002 aa23.41■■□□□ 1.34
IRF3-216ENST00000597180 KIF6Q6ZMV9 814 aa23.41■■□□□ 1.34
IRF3-216ENST00000597180 CHMP4AQ9BY43 222 aa23.41■■□□□ 1.34
IRF3-216ENST00000597180 MYH16Q9H6N6 1097 aa23.41■■□□□ 1.34
IRF3-216ENST00000597180 CARMIL3Q8ND23 1372 aa23.4■■□□□ 1.34
IRF3-216ENST00000597180 N4BP2Q86UW6 1770 aaPredicted RBP23.4■■□□□ 1.34
IRF3-216ENST00000597180 HLFQ16534 295 aa23.4■■□□□ 1.34
IRF3-216ENST00000597180 NLGN2Q8NFZ4 835 aa23.4■■□□□ 1.34
IRF3-216ENST00000597180 BRCA1P38398 1863 aaKnown RBP23.39■■□□□ 1.34
IRF3-216ENST00000597180 SERPINB2P05120 415 aa23.39■■□□□ 1.33
IRF3-216ENST00000597180 TWISTNBQ3B726 338 aaPredicted RBP23.39■■□□□ 1.33
IRF3-216ENST00000597180 BICDL1Q6ZP65 573 aa23.39■■□□□ 1.33
IRF3-216ENST00000597180 ANKRD31Q8N7Z5 1873 aa23.39■■□□□ 1.33
IRF3-216ENST00000597180 XAGE3Q8WTP9 111 aa23.38■■□□□ 1.33
IRF3-216ENST00000597180 SETDB2Q96T68 719 aa23.38■■□□□ 1.33
IRF3-216ENST00000597180 HYPKQ9NX55 129 aa23.38■■□□□ 1.33
IRF3-216ENST00000597180 ATP10DQ9P241 1426 aa23.38■■□□□ 1.33
IRF3-216ENST00000597180 ARFGEF2Q9Y6D5 1785 aa23.37■■□□□ 1.33
IRF3-216ENST00000597180 CCDC30Q5VVM6 783 aa23.37■■□□□ 1.33
IRF3-216ENST00000597180 COPS6Q7L5N1 327 aa23.37■■□□□ 1.33
IRF3-216ENST00000597180 EXOSC9Q06265 439 aaKnown RBP23.36■■□□□ 1.33
IRF3-216ENST00000597180 ZBTB3Q9H5J0 574 aa23.36■■□□□ 1.33
IRF3-216ENST00000597180 PXDNLA1KZ92 1463 aa23.36■■□□□ 1.33
IRF3-216ENST00000597180 DLEC1Q9Y238 1755 aa23.35■■□□□ 1.33
IRF3-216ENST00000597180 E9PSI1 815 aa23.35■■□□□ 1.33
IRF3-216ENST00000597180 GIGYF2Q6Y7W6 1299 aaKnown RBP23.35■■□□□ 1.33
IRF3-216ENST00000597180 TGFB2P61812 414 aa23.34■■□□□ 1.33
IRF3-216ENST00000597180 AIMP1Q12904 312 aaKnown RBP23.34■■□□□ 1.33
IRF3-216ENST00000597180 NIP7Q9Y221 180 aaKnown RBP eCLIP23.34■■□□□ 1.33
IRF3-216ENST00000597180 VAMP4O75379 141 aa23.33■■□□□ 1.33
IRF3-216ENST00000597180 SLFN5Q08AF3 891 aa23.33■■□□□ 1.33
IRF3-216ENST00000597180 PRR5LQ6MZQ0 368 aa23.31■■□□□ 1.32
IRF3-216ENST00000597180 ZNF34Q8IZ26 560 aa23.31■■□□□ 1.32
IRF3-216ENST00000597180 PLBD2Q8NHP8 589 aa23.31■■□□□ 1.32
IRF3-216ENST00000597180 IBTKQ9P2D0 1353 aaPredicted RBP23.3■■□□□ 1.32
IRF3-216ENST00000597180 ANKRD13DQ6ZTN6 518 aa23.3■■□□□ 1.32
IRF3-216ENST00000597180 TRMT2AQ8IZ69 625 aaKnown RBP23.3■■□□□ 1.32
IRF3-216ENST00000597180 CNBD1Q8NA66 436 aa23.3■■□□□ 1.32
IRF3-216ENST00000597180 STK31Q9BXU1 1019 aa23.3■■□□□ 1.32
IRF3-216ENST00000597180 PHAXQ9H814 394 aaKnown RBP23.3■■□□□ 1.32
IRF3-216ENST00000597180 UBN2Q6ZU65 1347 aa23.3■■□□□ 1.32
IRF3-216ENST00000597180 COL11A2P13942 1736 aaPredicted RBP23.29■■□□□ 1.32
IRF3-216ENST00000597180 HSP90AB3PQ58FF7 597 aa23.29■■□□□ 1.32
IRF3-216ENST00000597180 NBPF5PQ86XG9 351 aaPredicted RBP23.29■■□□□ 1.32
IRF3-216ENST00000597180 CDCA7LQ96GN5 454 aa23.29■■□□□ 1.32
IRF3-216ENST00000597180 DPEP1P16444 411 aa23.28■■□□□ 1.32
IRF3-216ENST00000597180 ARFGEF1Q9Y6D6 1849 aa23.28■■□□□ 1.32
IRF3-216ENST00000597180 A0A0G2JLW4 131 aa23.27■■□□□ 1.32
IRF3-216ENST00000597180 DCAF8L1A6NGE4 600 aa23.27■■□□□ 1.32
IRF3-216ENST00000597180 GPTP24298 496 aa23.27■■□□□ 1.32
IRF3-216ENST00000597180 TCIRG1Q13488 830 aa23.27■■□□□ 1.32
IRF3-216ENST00000597180 TPTE2Q6XPS3 522 aa23.27■■□□□ 1.32
IRF3-216ENST00000597180 TCERG1O14776 1098 aaKnown RBP23.26■■□□□ 1.31
IRF3-216ENST00000597180 KCNA3P22001 575 aa23.26■■□□□ 1.31
IRF3-216ENST00000597180 ST5P78524 1137 aa23.26■■□□□ 1.31
IRF3-216ENST00000597180 HNRNPUQ00839 825 aaKnown RBP eCLIP23.26■■□□□ 1.312e-8■□□□□ 8.3
IRF3-216ENST00000597180 PARP10Q53GL7 1025 aa23.26■■□□□ 1.31
IRF3-216ENST00000597180 BRIP1Q9BX63 1249 aa23.26■■□□□ 1.31
IRF3-216ENST00000597180 NYXQ9GZU5 481 aa23.26■■□□□ 1.31
IRF3-216ENST00000597180 SLC4A2P04920 1241 aa23.25■■□□□ 1.31
IRF3-216ENST00000597180 CHD4Q14839 1912 aa23.25■■□□□ 1.31
IRF3-216ENST00000597180 NPHP1O15259 732 aa23.24■■□□□ 1.31
IRF3-216ENST00000597180 GPR162Q16538 588 aa23.24■■□□□ 1.31
IRF3-216ENST00000597180 SUSD4Q5VX71 490 aa23.24■■□□□ 1.31
IRF3-216ENST00000597180 CCDC24Q8N4L8 307 aa23.24■■□□□ 1.31
IRF3-216ENST00000597180 PDZRN3Q9UPQ7 1066 aa23.24■■□□□ 1.31
IRF3-216ENST00000597180 TNRC6CQ9HCJ0 1690 aaKnown RBP23.24■■□□□ 1.31
IRF3-216ENST00000597180 DDX58O95786 925 aaKnown RBP23.23■■□□□ 1.31
IRF3-216ENST00000597180 YBX3P16989 372 aaKnown RBP eCLIP23.23■■□□□ 1.31
IRF3-216ENST00000597180 CHRNA5P30532 468 aa23.23■■□□□ 1.31
IRF3-216ENST00000597180 PDE6BP35913 854 aa23.23■■□□□ 1.31
IRF3-216ENST00000597180 G2E3Q7L622 706 aa23.23■■□□□ 1.31
IRF3-216ENST00000597180 RIC3Q7Z5B4 369 aa23.23■■□□□ 1.31
IRF3-216ENST00000597180 ISCA1Q9BUE6 129 aa23.23■■□□□ 1.31
IRF3-216ENST00000597180 RIC1Q4ADV7 1423 aa23.23■■□□□ 1.31
IRF3-216ENST00000597180 FAM177BA6PVY3 158 aa23.22■■□□□ 1.31
IRF3-216ENST00000597180 NTSR2O95665 410 aa23.22■■□□□ 1.31
IRF3-216ENST00000597180 PPP1R42Q7Z4L9 355 aa23.22■■□□□ 1.31
IRF3-216ENST00000597180 NLRP10Q86W26 655 aa23.22■■□□□ 1.31
IRF3-216ENST00000597180 CACNA1SQ13698 1873 aa23.22■■□□□ 1.31
IRF3-216ENST00000597180 C2CD5Q86YS7 1000 aa23.21■■□□□ 1.31
IRF3-216ENST00000597180 PELP1Q8IZL8 1130 aaKnown RBP23.21■■□□□ 1.31
IRF3-216ENST00000597180 PIM2Q9P1W9 311 aa23.21■■□□□ 1.31
IRF3-216ENST00000597180 RNF123Q5XPI4 1314 aa23.21■■□□□ 1.31
IRF3-216ENST00000597180 ABCC12Q96J65 1359 aa23.21■■□□□ 1.31
IRF3-216ENST00000597180 LAMB2P55268 1798 aa23.21■■□□□ 1.31
IRF3-216ENST00000597180 ADCY9O60503 1353 aa23.2■■□□□ 1.3
IRF3-216ENST00000597180 KLRG2A4D1S0 409 aaPredicted RBP23.2■■□□□ 1.3
IRF3-216ENST00000597180 H0YIN7 160 aa23.2■■□□□ 1.3
IRF3-216ENST00000597180 FLIIQ13045 1269 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms