RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 ABT1Q9ULW3 272 aaKnown RBP21.21■□□□□ 0.99
LIG1-214ENST00000597146 TRPM7Q96QT4 1865 aa21.2■□□□□ 0.98
LIG1-214ENST00000597146 EPHX2P34913 555 aa21.2■□□□□ 0.98
LIG1-214ENST00000597146 RGS19P49795 217 aa21.2■□□□□ 0.98
LIG1-214ENST00000597146 STYK1Q6J9G0 422 aa21.2■□□□□ 0.98
LIG1-214ENST00000597146 VSIG10Q8N0Z9 540 aa21.2■□□□□ 0.98
LIG1-214ENST00000597146 ZNF330Q9Y3S2 320 aaPredicted RBP21.2■□□□□ 0.98
LIG1-214ENST00000597146 RNF123Q5XPI4 1314 aa21.2■□□□□ 0.98
LIG1-214ENST00000597146 SRGNP10124 158 aa21.19■□□□□ 0.98
LIG1-214ENST00000597146 CNTROBQ8N137 903 aa21.19■□□□□ 0.98
LIG1-214ENST00000597146 CNBD1Q8NA66 436 aa21.19■□□□□ 0.98
LIG1-214ENST00000597146 TBC1D2BQ9UPU7 963 aa21.19■□□□□ 0.98
LIG1-214ENST00000597146 PDE4DIPQ5VU43 2346 aa21.19■□□□□ 0.98
LIG1-214ENST00000597146 A0A087WZG4 1122 aa21.18■□□□□ 0.98
LIG1-214ENST00000597146 SOGA3Q5TF21 947 aa21.18■□□□□ 0.98
LIG1-214ENST00000597146 ZNF277Q9NRM2 450 aaPredicted RBP21.18■□□□□ 0.98
LIG1-214ENST00000597146 SIPA1L3O60292 1781 aaPredicted RBP21.18■□□□□ 0.98
LIG1-214ENST00000597146 NPHP1O15259 732 aa21.17■□□□□ 0.98
LIG1-214ENST00000597146 IL13P35225 146 aa21.17■□□□□ 0.98
LIG1-214ENST00000597146 MASTLQ96GX5 879 aa21.17■□□□□ 0.98
LIG1-214ENST00000597146 TSKSQ9UJT2 592 aa21.17■□□□□ 0.98
LIG1-214ENST00000597146 CASP8AP2Q9UKL3 1982 aa21.16■□□□□ 0.98
LIG1-214ENST00000597146 CCDC93Q567U6 631 aa21.16■□□□□ 0.98
LIG1-214ENST00000597146 STARD3NLO95772 234 aa21.15■□□□□ 0.98
LIG1-214ENST00000597146 ST5P78524 1137 aa21.15■□□□□ 0.98
LIG1-214ENST00000597146 FMR1Q06787 632 aaKnown RBP eCLIP21.15■□□□□ 0.98
LIG1-214ENST00000597146 GRM1Q13255 1194 aa21.15■□□□□ 0.98
LIG1-214ENST00000597146 OLFM4Q6UX06 510 aa21.15■□□□□ 0.98
LIG1-214ENST00000597146 PAXIP1Q6ZW49 1069 aaPredicted RBP21.15■□□□□ 0.98
LIG1-214ENST00000597146 C7orf43Q8WVR3 580 aa21.15■□□□□ 0.98
LIG1-214ENST00000597146 FKBP4Q02790 459 aaKnown RBP eCLIP21.14■□□□□ 0.97
LIG1-214ENST00000597146 CAPNS2Q96L46 248 aa21.14■□□□□ 0.97
LIG1-214ENST00000597146 CFAP44Q96MT7 982 aa21.14■□□□□ 0.97
LIG1-214ENST00000597146 CYP4F22Q6NT55 531 aa21.13■□□□□ 0.97
LIG1-214ENST00000597146 PNMA8AQ86V59 439 aaPredicted RBP21.13■□□□□ 0.97
LIG1-214ENST00000597146 SETDB2Q96T68 719 aa21.13■□□□□ 0.97
LIG1-214ENST00000597146 DDX21Q9NR30 783 aaKnown RBP eCLIP21.13■□□□□ 0.97
LIG1-214ENST00000597146 TTC5Q8N0Z6 440 aa21.12■□□□□ 0.97
LIG1-214ENST00000597146 COL4A5P29400 1685 aa21.12■□□□□ 0.97
LIG1-214ENST00000597146 HEG1Q9ULI3 1381 aa21.11■□□□□ 0.97
LIG1-214ENST00000597146 CAMTA2O94983 1202 aa21.11■□□□□ 0.97
LIG1-214ENST00000597146 HMOX1P09601 288 aa21.11■□□□□ 0.97
LIG1-214ENST00000597146 MTHFSDQ2M296 383 aaKnown RBP21.11■□□□□ 0.97
LIG1-214ENST00000597146 MORC1Q86VD1 984 aa21.11■□□□□ 0.97
LIG1-214ENST00000597146 ZNF496Q96IT1 587 aaPredicted RBP21.11■□□□□ 0.97
LIG1-214ENST00000597146 BEGAINQ9BUH8 593 aa21.11■□□□□ 0.97
LIG1-214ENST00000597146 PANK3Q9H999 370 aa21.1■□□□□ 0.97
LIG1-214ENST00000597146 FZD9O00144 591 aa21.09■□□□□ 0.97
LIG1-214ENST00000597146 IL6STP40189 918 aaPredicted RBP21.09■□□□□ 0.97
LIG1-214ENST00000597146 GPR101Q96P66 508 aaPredicted RBP21.09■□□□□ 0.97
LIG1-214ENST00000597146 A1BGP04217 495 aa21.08■□□□□ 0.97
LIG1-214ENST00000597146 IARSP41252 1262 aaKnown RBP21.08■□□□□ 0.97
LIG1-214ENST00000597146 MCOLN1Q9GZU1 580 aa21.08■□□□□ 0.97
LIG1-214ENST00000597146 AOC2O75106 756 aa21.07■□□□□ 0.96
LIG1-214ENST00000597146 NPR1P16066 1061 aa21.07■□□□□ 0.96
LIG1-214ENST00000597146 ECE1P42892 770 aa21.07■□□□□ 0.96
LIG1-214ENST00000597146 GPC2Q8N158 579 aa21.07■□□□□ 0.96
LIG1-214ENST00000597146 NBPF5PQ86XG9 351 aaPredicted RBP21.06■□□□□ 0.96
LIG1-214ENST00000597146 SNED1Q8TER0 1413 aa21.05■□□□□ 0.96
LIG1-214ENST00000597146 TRAF5O00463 557 aa21.05■□□□□ 0.96
LIG1-214ENST00000597146 PIP4K2AP48426 406 aaPredicted RBP21.05■□□□□ 0.96
LIG1-214ENST00000597146 DZIP3Q86Y13 1208 aaKnown RBP21.05■□□□□ 0.96
LIG1-214ENST00000597146 GJA3Q9Y6H8 435 aa21.05■□□□□ 0.96
LIG1-214ENST00000597146 CST9Q5W186 159 aa21.04■□□□□ 0.96
LIG1-214ENST00000597146 ZNF790Q6PG37 636 aa21.04■□□□□ 0.96
LIG1-214ENST00000597146 RTKN2Q8IZC4 609 aa21.04■□□□□ 0.96
LIG1-214ENST00000597146 SYNE4Q8N205 404 aa21.04■□□□□ 0.96
LIG1-214ENST00000597146 CCER1Q8TC90 406 aaPredicted RBP21.04■□□□□ 0.96
LIG1-214ENST00000597146 NPM2Q86SE8 214 aaKnown RBP21.03■□□□□ 0.96
LIG1-214ENST00000597146 TLL2Q9Y6L7 1015 aa21.03■□□□□ 0.96
LIG1-214ENST00000597146 TEX13AQ9BXU3 409 aaPredicted RBP21.02■□□□□ 0.96
LIG1-214ENST00000597146 KLRG2A4D1S0 409 aaPredicted RBP21.01■□□□□ 0.95
LIG1-214ENST00000597146 LMOD1P29536 600 aaPredicted RBP21.01■□□□□ 0.95
LIG1-214ENST00000597146 EPS15P42566 896 aa21.01■□□□□ 0.95
LIG1-214ENST00000597146 SCNN1DP51172 638 aa21.01■□□□□ 0.95
LIG1-214ENST00000597146 DGKZQ13574 1117 aa21■□□□□ 0.95
LIG1-214ENST00000597146 FAM177BA6PVY3 158 aa20.99■□□□□ 0.95
LIG1-214ENST00000597146 TEFQ10587 303 aa20.99■□□□□ 0.95
LIG1-214ENST00000597146 JDP2Q8WYK2 163 aa20.99■□□□□ 0.95
LIG1-214ENST00000597146 FMNL2Q96PY5 1086 aa20.99■□□□□ 0.95
LIG1-214ENST00000597146 KCNQ3O43525 872 aa20.98■□□□□ 0.95
LIG1-214ENST00000597146 MAP2K2P36507 400 aa20.98■□□□□ 0.95
LIG1-214ENST00000597146 EIF6P56537 245 aaKnown RBP20.98■□□□□ 0.95
LIG1-214ENST00000597146 IL17REQ8NFR9 667 aa20.98■□□□□ 0.95
LIG1-214ENST00000597146 SLC51AQ86UW1 340 aa20.97■□□□□ 0.95
LIG1-214ENST00000597146 PSMD1Q99460 953 aa20.97■□□□□ 0.95
LIG1-214ENST00000597146 TIMELESSQ9UNS1 1208 aa20.97■□□□□ 0.95
LIG1-214ENST00000597146 NIP7Q9Y221 180 aaKnown RBP eCLIP20.96■□□□□ 0.95
LIG1-214ENST00000597146 PRAMEF22A3QJZ6 481 aa20.95■□□□□ 0.94
LIG1-214ENST00000597146 CA12O43570 354 aa20.95■□□□□ 0.94
LIG1-214ENST00000597146 CLEC4GQ6UXB4 293 aa20.95■□□□□ 0.94
LIG1-214ENST00000597146 SAPCD2Q86UD0 394 aa20.95■□□□□ 0.94
LIG1-214ENST00000597146 ZNF652Q9Y2D9 606 aa20.95■□□□□ 0.94
LIG1-214ENST00000597146 USP16Q9Y5T5 823 aa20.95■□□□□ 0.94
LIG1-214ENST00000597146 CLSPNQ9HAW4 1339 aa20.95■□□□□ 0.94
LIG1-214ENST00000597146 ABCC12Q96J65 1359 aa20.95■□□□□ 0.94
LIG1-214ENST00000597146 ALDH1B1P30837 517 aa20.94■□□□□ 0.94
LIG1-214ENST00000597146 TPTE2Q6XPS3 522 aa20.94■□□□□ 0.94
LIG1-214ENST00000597146 USP50Q70EL3 339 aaPredicted RBP20.94■□□□□ 0.94
LIG1-214ENST00000597146 CELF2O95319 508 aaKnown RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms