RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 COPS6Q7L5N1 327 aa24.85■■□□□ 1.57
PNKP-207ENST00000596014 POLD1P28340 1107 aa24.84■■□□□ 1.57
PNKP-207ENST00000596014 XAGE3Q8WTP9 111 aa24.84■■□□□ 1.57
PNKP-207ENST00000596014 STK31Q9BXU1 1019 aa24.84■■□□□ 1.57
PNKP-207ENST00000596014 CACNA1FO60840 1977 aa24.84■■□□□ 1.57
PNKP-207ENST00000596014 AIMP1Q12904 312 aaKnown RBP24.83■■□□□ 1.57
PNKP-207ENST00000596014 KIF6Q6ZMV9 814 aa24.83■■□□□ 1.57
PNKP-207ENST00000596014 LRP5O75197 1615 aa24.83■■□□□ 1.57
PNKP-207ENST00000596014 MAP3K15Q6ZN16 1313 aa24.82■■□□□ 1.56
PNKP-207ENST00000596014 ERVV-1B6SEH8 477 aa24.81■■□□□ 1.56
PNKP-207ENST00000596014 SLC4A2P04920 1241 aa24.81■■□□□ 1.56
PNKP-207ENST00000596014 CLEC4GQ6UXB4 293 aa24.81■■□□□ 1.56
PNKP-207ENST00000596014 PHAXQ9H814 394 aaKnown RBP24.81■■□□□ 1.56
PNKP-207ENST00000596014 NUP98P52948 1817 aa24.81■■□□□ 1.56
PNKP-207ENST00000596014 RGL2O15211 777 aa24.81■■□□□ 1.56
PNKP-207ENST00000596014 MMP10P09238 476 aa24.81■■□□□ 1.56
PNKP-207ENST00000596014 TM4SF1P30408 202 aa24.81■■□□□ 1.56
PNKP-207ENST00000596014 HLFQ16534 295 aa24.81■■□□□ 1.56
PNKP-207ENST00000596014 ZBTB3Q9H5J0 574 aa24.81■■□□□ 1.56
PNKP-207ENST00000596014 ZNF652Q9Y2D9 606 aa24.8■■□□□ 1.56
PNKP-207ENST00000596014 NFIXQ14938 502 aa24.79■■□□□ 1.56
PNKP-207ENST00000596014 TBC1D9BQ66K14 1250 aa24.78■■□□□ 1.56
PNKP-207ENST00000596014 CT47B1P0C2W7 299 aaPredicted RBP24.77■■□□□ 1.56
PNKP-207ENST00000596014 BICDL1Q6ZP65 573 aa24.77■■□□□ 1.56
PNKP-207ENST00000596014 ANKRD13DQ6ZTN6 518 aa24.77■■□□□ 1.56
PNKP-207ENST00000596014 DDR1Q08345 913 aa24.76■■□□□ 1.55
PNKP-207ENST00000596014 GIGYF2Q6Y7W6 1299 aaKnown RBP24.76■■□□□ 1.55
PNKP-207ENST00000596014 G2E3Q7L622 706 aa24.76■■□□□ 1.55
PNKP-207ENST00000596014 ZNF428Q96B54 188 aa24.76■■□□□ 1.55
PNKP-207ENST00000596014 PPP1R1BQ9UD71 204 aaPredicted RBP24.76■■□□□ 1.55
PNKP-207ENST00000596014 PARP3Q9Y6F1 533 aa24.76■■□□□ 1.55
PNKP-207ENST00000596014 PLBD2Q8NHP8 589 aa24.75■■□□□ 1.55
PNKP-207ENST00000596014 POLRMTO00411 1230 aaKnown RBP24.75■■□□□ 1.55
PNKP-207ENST00000596014 SETDB2Q96T68 719 aa24.75■■□□□ 1.55
PNKP-207ENST00000596014 NIP7Q9Y221 180 aaKnown RBP eCLIP24.73■■□□□ 1.55
PNKP-207ENST00000596014 FLIIQ13045 1269 aa24.72■■□□□ 1.55
PNKP-207ENST00000596014 SSH1Q8WYL5 1049 aa24.72■■□□□ 1.55
PNKP-207ENST00000596014 AFDNP55196 1824 aaKnown RBP24.72■■□□□ 1.55
PNKP-207ENST00000596014 DDX58O95786 925 aaKnown RBP24.72■■□□□ 1.55
PNKP-207ENST00000596014 RIC3Q7Z5B4 369 aa24.72■■□□□ 1.55
PNKP-207ENST00000596014 ATP10DQ9P241 1426 aa24.71■■□□□ 1.55
PNKP-207ENST00000596014 ARFGEF2Q9Y6D5 1785 aa24.71■■□□□ 1.55
PNKP-207ENST00000596014 SERPINB2P05120 415 aa24.71■■□□□ 1.55
PNKP-207ENST00000596014 ALDH1L2Q3SY69 923 aa24.71■■□□□ 1.55
PNKP-207ENST00000596014 CARMIL3Q8ND23 1372 aa24.7■■□□□ 1.55
PNKP-207ENST00000596014 GPTP24298 496 aa24.7■■□□□ 1.54
PNKP-207ENST00000596014 HSP90AB3PQ58FF7 597 aa24.7■■□□□ 1.54
PNKP-207ENST00000596014 ZNF34Q8IZ26 560 aa24.7■■□□□ 1.54
PNKP-207ENST00000596014 MRPL50Q8N5N7 158 aaKnown RBP24.7■■□□□ 1.54
PNKP-207ENST00000596014 TCIRG1Q13488 830 aa24.69■■□□□ 1.54
PNKP-207ENST00000596014 KSR2Q6VAB6 950 aa24.69■■□□□ 1.54
PNKP-207ENST00000596014 ANKRD36CQ5JPF3 1778 aa24.69■■□□□ 1.54
PNKP-207ENST00000596014 NRXN2Q9P2S2 1712 aa24.69■■□□□ 1.54
PNKP-207ENST00000596014 PI4KAP2A4QPH2 592 aa24.69■■□□□ 1.54
PNKP-207ENST00000596014 PI4KAP1Q8N8J0 262 aa24.69■■□□□ 1.54
PNKP-207ENST00000596014 BCL2L13Q9BXK5 485 aa24.69■■□□□ 1.54
PNKP-207ENST00000596014 FKBP5Q13451 457 aaPredicted RBP24.68■■□□□ 1.54
PNKP-207ENST00000596014 FHDC1Q9C0D6 1143 aaPredicted RBP24.68■■□□□ 1.54
PNKP-207ENST00000596014 RARSP54136 660 aaKnown RBP24.67■■□□□ 1.54
PNKP-207ENST00000596014 SMC4Q9NTJ3 1288 aa24.67■■□□□ 1.54
PNKP-207ENST00000596014 MAP3K2Q9Y2U5 619 aa24.67■■□□□ 1.54
PNKP-207ENST00000596014 ADCY9O60503 1353 aa24.67■■□□□ 1.54
PNKP-207ENST00000596014 KLHL34Q8N239 644 aa24.66■■□□□ 1.54
PNKP-207ENST00000596014 UBN2Q6ZU65 1347 aa24.66■■□□□ 1.54
PNKP-207ENST00000596014 FAM177BA6PVY3 158 aa24.65■■□□□ 1.54
PNKP-207ENST00000596014 NBPF5PQ86XG9 351 aaPredicted RBP24.65■■□□□ 1.54
PNKP-207ENST00000596014 METTL22Q9BUU2 404 aaPredicted RBP24.65■■□□□ 1.54
PNKP-207ENST00000596014 CD2APQ9Y5K6 639 aa24.65■■□□□ 1.54
PNKP-207ENST00000596014 ATP5J2-PTCD1G3V325 749 aa24.64■■□□□ 1.53
PNKP-207ENST00000596014 PARP10Q53GL7 1025 aa24.64■■□□□ 1.53
PNKP-207ENST00000596014 PRR5LQ6MZQ0 368 aa24.64■■□□□ 1.53
PNKP-207ENST00000596014 TPTE2Q6XPS3 522 aa24.64■■□□□ 1.53
PNKP-207ENST00000596014 SYT17Q9BSW7 474 aa24.64■■□□□ 1.53
PNKP-207ENST00000596014 ISCA1Q9BUE6 129 aa24.64■■□□□ 1.53
PNKP-207ENST00000596014 KIF13BQ9NQT8 1826 aa24.64■■□□□ 1.53
PNKP-207ENST00000596014 SUSD4Q5VX71 490 aa24.63■■□□□ 1.53
PNKP-207ENST00000596014 NLRP10Q86W26 655 aa24.63■■□□□ 1.53
PNKP-207ENST00000596014 CNBD1Q8NA66 436 aa24.63■■□□□ 1.53
PNKP-207ENST00000596014 MYD88Q99836 296 aa24.63■■□□□ 1.53
PNKP-207ENST00000596014 C10orf71Q711Q0 1435 aa24.63■■□□□ 1.53
PNKP-207ENST00000596014 TRIM28Q13263 835 aaKnown RBP24.62■■□□□ 1.53
PNKP-207ENST00000596014 BRPF1P55201 1214 aaPredicted RBP24.62■■□□□ 1.53
PNKP-207ENST00000596014 DNAAF4Q8WXU2 420 aa24.62■■□□□ 1.53
PNKP-207ENST00000596014 NYXQ9GZU5 481 aa24.62■■□□□ 1.53
PNKP-207ENST00000596014 NPHP1O15259 732 aa24.61■■□□□ 1.53
PNKP-207ENST00000596014 PPP1R42Q7Z4L9 355 aa24.61■■□□□ 1.53
PNKP-207ENST00000596014 CCDC24Q8N4L8 307 aa24.61■■□□□ 1.53
PNKP-207ENST00000596014 PTPRCP08575 1304 aa24.6■■□□□ 1.53
PNKP-207ENST00000596014 F6X3S4 739 aa24.6■■□□□ 1.53
PNKP-207ENST00000596014 GTF2E1P29083 439 aaPredicted RBP24.59■■□□□ 1.53
PNKP-207ENST00000596014 NEXNQ0ZGT2 675 aa24.59■■□□□ 1.53
PNKP-207ENST00000596014 UTP14AQ9BVJ6 771 aaKnown RBP24.59■■□□□ 1.53
PNKP-207ENST00000596014 GTF3C3Q9Y5Q9 886 aa24.59■■□□□ 1.53
PNKP-207ENST00000596014 IBTKQ9P2D0 1353 aaPredicted RBP24.59■■□□□ 1.53
PNKP-207ENST00000596014 BCAR3O75815 825 aa24.59■■□□□ 1.53
PNKP-207ENST00000596014 NTSR2O95665 410 aa24.59■■□□□ 1.53
PNKP-207ENST00000596014 ST5P78524 1137 aa24.59■■□□□ 1.53
PNKP-207ENST00000596014 NUTM1Q86Y26 1132 aa24.59■■□□□ 1.53
PNKP-207ENST00000596014 NOB1Q9ULX3 412 aaKnown RBP24.59■■□□□ 1.53
PNKP-207ENST00000596014 IGKV5-2P06315 115 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms