RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 ZNF277Q9NRM2 450 aaPredicted RBP18.79■□□□□ 0.6
SHKBP1-208ENST00000595726 HACL1Q9UJ83 578 aa18.79■□□□□ 0.6
SHKBP1-208ENST00000595726 ABT1Q9ULW3 272 aaKnown RBP18.79■□□□□ 0.6
SHKBP1-208ENST00000595726 A0A087WZG4 1122 aa18.78■□□□□ 0.6
SHKBP1-208ENST00000595726 NPHP1O15259 732 aa18.78■□□□□ 0.6
SHKBP1-208ENST00000595726 RGS19P49795 217 aa18.78■□□□□ 0.6
SHKBP1-208ENST00000595726 FMR1Q06787 632 aaKnown RBP eCLIP18.78■□□□□ 0.6
SHKBP1-208ENST00000595726 MORC1Q86VD1 984 aa18.78■□□□□ 0.6
SHKBP1-208ENST00000595726 CNBD1Q8NA66 436 aa18.78■□□□□ 0.6
SHKBP1-208ENST00000595726 PANK3Q9H999 370 aa18.78■□□□□ 0.6
SHKBP1-208ENST00000595726 PCDH10Q9P2E7 1040 aa18.78■□□□□ 0.6
SHKBP1-208ENST00000595726 HMOX1P09601 288 aa18.77■□□□□ 0.6
SHKBP1-208ENST00000595726 MASTLQ96GX5 879 aa18.77■□□□□ 0.6
SHKBP1-208ENST00000595726 SETDB2Q96T68 719 aa18.77■□□□□ 0.6
SHKBP1-208ENST00000595726 RNF123Q5XPI4 1314 aa18.76■□□□□ 0.59
SHKBP1-208ENST00000595726 GRM1Q13255 1194 aa18.76■□□□□ 0.59
SHKBP1-208ENST00000595726 MTHFSDQ2M296 383 aaKnown RBP18.76■□□□□ 0.59
SHKBP1-208ENST00000595726 TSKSQ9UJT2 592 aa18.76■□□□□ 0.59
SHKBP1-208ENST00000595726 SCN4AP35499 1836 aa18.75■□□□□ 0.59
SHKBP1-208ENST00000595726 SOGA3Q5TF21 947 aa18.75■□□□□ 0.59
SHKBP1-208ENST00000595726 ZNF496Q96IT1 587 aaPredicted RBP18.75■□□□□ 0.59
SHKBP1-208ENST00000595726 TIMELESSQ9UNS1 1208 aa18.75■□□□□ 0.59
SHKBP1-208ENST00000595726 MRC1P22897 1456 aa18.75■□□□□ 0.59
SHKBP1-208ENST00000595726 A1BGP04217 495 aa18.74■□□□□ 0.59
SHKBP1-208ENST00000595726 ST5P78524 1137 aa18.74■□□□□ 0.59
SHKBP1-208ENST00000595726 CCDC93Q567U6 631 aa18.74■□□□□ 0.59
SHKBP1-208ENST00000595726 CACNA1SQ13698 1873 aa18.73■□□□□ 0.59
SHKBP1-208ENST00000595726 CAMTA2O94983 1202 aa18.73■□□□□ 0.59
SHKBP1-208ENST00000595726 FKBP4Q02790 459 aaKnown RBP eCLIP18.73■□□□□ 0.59
SHKBP1-208ENST00000595726 CYP4F22Q6NT55 531 aa18.73■□□□□ 0.59
SHKBP1-208ENST00000595726 PAXIP1Q6ZW49 1069 aaPredicted RBP18.73■□□□□ 0.59
SHKBP1-208ENST00000595726 PNMA8AQ86V59 439 aaPredicted RBP18.73■□□□□ 0.59
SHKBP1-208ENST00000595726 TTC5Q8N0Z6 440 aa18.73■□□□□ 0.59
SHKBP1-208ENST00000595726 CFAP44Q96MT7 982 aa18.73■□□□□ 0.59
SHKBP1-208ENST00000595726 DDX21Q9NR30 783 aaKnown RBP eCLIP18.73■□□□□ 0.59
SHKBP1-208ENST00000595726 CAPNS2Q96L46 248 aa18.72■□□□□ 0.59
SHKBP1-208ENST00000595726 ADAMTSL1Q8N6G6 1762 aa18.71■□□□□ 0.59
SHKBP1-208ENST00000595726 IL6STP40189 918 aaPredicted RBP18.71■□□□□ 0.59
SHKBP1-208ENST00000595726 GPR101Q96P66 508 aaPredicted RBP18.71■□□□□ 0.59
SHKBP1-208ENST00000595726 PIP4K2AP48426 406 aaPredicted RBP18.7■□□□□ 0.58
SHKBP1-208ENST00000595726 CCER1Q8TC90 406 aaPredicted RBP18.7■□□□□ 0.58
SHKBP1-208ENST00000595726 BEGAINQ9BUH8 593 aa18.7■□□□□ 0.58
SHKBP1-208ENST00000595726 HEG1Q9ULI3 1381 aa18.69■□□□□ 0.58
SHKBP1-208ENST00000595726 FZD9O00144 591 aa18.69■□□□□ 0.58
SHKBP1-208ENST00000595726 SYNE4Q8N205 404 aa18.69■□□□□ 0.58
SHKBP1-208ENST00000595726 GJA3Q9Y6H8 435 aa18.69■□□□□ 0.58
SHKBP1-208ENST00000595726 TRAF5O00463 557 aa18.68■□□□□ 0.58
SHKBP1-208ENST00000595726 AOC2O75106 756 aa18.68■□□□□ 0.58
SHKBP1-208ENST00000595726 NPR1P16066 1061 aa18.68■□□□□ 0.58
SHKBP1-208ENST00000595726 IARSP41252 1262 aaKnown RBP18.68■□□□□ 0.58
SHKBP1-208ENST00000595726 CST9Q5W186 159 aa18.68■□□□□ 0.58
SHKBP1-208ENST00000595726 ZNF790Q6PG37 636 aa18.68■□□□□ 0.58
SHKBP1-208ENST00000595726 NBPF5PQ86XG9 351 aaPredicted RBP18.68■□□□□ 0.58
SHKBP1-208ENST00000595726 DZIP3Q86Y13 1208 aaKnown RBP18.68■□□□□ 0.58
SHKBP1-208ENST00000595726 SCN7AQ01118 1682 aa18.68■□□□□ 0.58
SHKBP1-208ENST00000595726 NPM2Q86SE8 214 aaKnown RBP18.67■□□□□ 0.58
SHKBP1-208ENST00000595726 GPC2Q8N158 579 aa18.67■□□□□ 0.58
SHKBP1-208ENST00000595726 IL17REQ8NFR9 667 aa18.67■□□□□ 0.58
SHKBP1-208ENST00000595726 TEX13AQ9BXU3 409 aaPredicted RBP18.67■□□□□ 0.58
SHKBP1-208ENST00000595726 MCOLN1Q9GZU1 580 aa18.67■□□□□ 0.58
SHKBP1-208ENST00000595726 UBR2Q8IWV8 1755 aa18.67■□□□□ 0.58
SHKBP1-208ENST00000595726 FAM177BA6PVY3 158 aa18.66■□□□□ 0.58
SHKBP1-208ENST00000595726 EPS15P42566 896 aa18.66■□□□□ 0.58
SHKBP1-208ENST00000595726 ECE1P42892 770 aa18.66■□□□□ 0.58
SHKBP1-208ENST00000595726 RTKN2Q8IZC4 609 aa18.66■□□□□ 0.58
SHKBP1-208ENST00000595726 KCNQ3O43525 872 aa18.65■□□□□ 0.58
SHKBP1-208ENST00000595726 ARFGEF2Q9Y6D5 1785 aa18.65■□□□□ 0.58
SHKBP1-208ENST00000595726 KLRG2A4D1S0 409 aaPredicted RBP18.64■□□□□ 0.57
SHKBP1-208ENST00000595726 TEFQ10587 303 aa18.64■□□□□ 0.57
SHKBP1-208ENST00000595726 USP16Q9Y5T5 823 aa18.63■□□□□ 0.57
SHKBP1-208ENST00000595726 PRAMEF22A3QJZ6 481 aa18.62■□□□□ 0.57
SHKBP1-208ENST00000595726 SCNN1DP51172 638 aa18.62■□□□□ 0.57
SHKBP1-208ENST00000595726 JDP2Q8WYK2 163 aa18.62■□□□□ 0.57
SHKBP1-208ENST00000595726 FMNL2Q96PY5 1086 aa18.62■□□□□ 0.57
SHKBP1-208ENST00000595726 TLL2Q9Y6L7 1015 aa18.62■□□□□ 0.57
SHKBP1-208ENST00000595726 LMOD1P29536 600 aaPredicted RBP18.61■□□□□ 0.57
SHKBP1-208ENST00000595726 TPTE2Q6XPS3 522 aa18.61■□□□□ 0.57
SHKBP1-208ENST00000595726 SLC51AQ86UW1 340 aa18.61■□□□□ 0.57
SHKBP1-208ENST00000595726 LTBP1Q14766 1721 aa18.6■□□□□ 0.57
SHKBP1-208ENST00000595726 COL4A5P29400 1685 aa18.6■□□□□ 0.57
SHKBP1-208ENST00000595726 MAP2K2P36507 400 aa18.6■□□□□ 0.57
SHKBP1-208ENST00000595726 EIF6P56537 245 aaKnown RBP18.6■□□□□ 0.57
SHKBP1-208ENST00000595726 DGKZQ13574 1117 aa18.6■□□□□ 0.57
SHKBP1-208ENST00000595726 NIP7Q9Y221 180 aaKnown RBP eCLIP18.6■□□□□ 0.57
SHKBP1-208ENST00000595726 KNSTRNQ9Y448 316 aa18.6■□□□□ 0.57
SHKBP1-208ENST00000595726 THSD7BQ9C0I4 1608 aa18.6■□□□□ 0.57
SHKBP1-208ENST00000595726 GNAT3A8MTJ3 354 aa18.59■□□□□ 0.57
SHKBP1-208ENST00000595726 ALDH1B1P30837 517 aa18.59■□□□□ 0.57
SHKBP1-208ENST00000595726 CLEC4GQ6UXB4 293 aa18.59■□□□□ 0.57
SHKBP1-208ENST00000595726 DIAPH1O60610 1272 aaKnown RBP18.58■□□□□ 0.56
SHKBP1-208ENST00000595726 HSPA5P11021 654 aaKnown RBP18.58■□□□□ 0.56
SHKBP1-208ENST00000595726 PSMD1Q99460 953 aa18.58■□□□□ 0.56
SHKBP1-208ENST00000595726 CASP8AP2Q9UKL3 1982 aa18.58■□□□□ 0.56
SHKBP1-208ENST00000595726 PDE4DIPQ5VU43 2346 aa18.58■□□□□ 0.56
SHKBP1-208ENST00000595726 USP50Q70EL3 339 aaPredicted RBP18.57■□□□□ 0.56
SHKBP1-208ENST00000595726 SAPCD2Q86UD0 394 aa18.57■□□□□ 0.56
SHKBP1-208ENST00000595726 SNED1Q8TER0 1413 aa18.57■□□□□ 0.56
SHKBP1-208ENST00000595726 BTBD11A6QL63 1104 aa18.56■□□□□ 0.56
SHKBP1-208ENST00000595726 HLFQ16534 295 aa18.56■□□□□ 0.56
SHKBP1-208ENST00000595726 AMER1Q5JTC6 1135 aaPredicted RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms