RNA–Protein interactions for RNA: ENST00000594668.5

ZNF548-203, Transcript of zinc finger protein 548, humanhuman

TSL 5

Gene ZNF548, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-203ENST00000594668 BCL2L12Q9HB09 334 aa11.91□□□□□ -0.5
ZNF548-203ENST00000594668 USP42Q9H9J4 1324 aaKnown RBP11.9□□□□□ -0.5
ZNF548-203ENST00000594668 ZPR1O75312 459 aa11.9□□□□□ -0.5
ZNF548-203ENST00000594668 BCAR3O75815 825 aa11.9□□□□□ -0.5
ZNF548-203ENST00000594668 CAMTA2O94983 1202 aa11.9□□□□□ -0.5
ZNF548-203ENST00000594668 HLFQ16534 295 aa11.9□□□□□ -0.5
ZNF548-203ENST00000594668 NPM2Q86SE8 214 aaKnown RBP11.9□□□□□ -0.5
ZNF548-203ENST00000594668 AFDNP55196 1824 aaKnown RBP11.9□□□□□ -0.5
ZNF548-203ENST00000594668 MAP3K15Q6ZN16 1313 aa11.89□□□□□ -0.51
ZNF548-203ENST00000594668 GYS1P13807 737 aa11.89□□□□□ -0.51
ZNF548-203ENST00000594668 FKBP8Q14318 412 aa11.89□□□□□ -0.51
ZNF548-203ENST00000594668 KIF6Q6ZMV9 814 aa11.89□□□□□ -0.51
ZNF548-203ENST00000594668 ANKRD13DQ6ZTN6 518 aa11.89□□□□□ -0.51
ZNF548-203ENST00000594668 ZBTB3Q9H5J0 574 aa11.89□□□□□ -0.51
ZNF548-203ENST00000594668 SMC4Q9NTJ3 1288 aa11.89□□□□□ -0.51
ZNF548-203ENST00000594668 ERVV-1B6SEH8 477 aa11.88□□□□□ -0.51
ZNF548-203ENST00000594668 ZBTB7AO95365 584 aa11.88□□□□□ -0.51
ZNF548-203ENST00000594668 BRPF1P55201 1214 aaPredicted RBP11.88□□□□□ -0.51
ZNF548-203ENST00000594668 FLIIQ13045 1269 aa11.88□□□□□ -0.51
ZNF548-203ENST00000594668 PLBD2Q8NHP8 589 aa11.88□□□□□ -0.51
ZNF548-203ENST00000594668 MSL1Q68DK7 614 aa11.87□□□□□ -0.51
ZNF548-203ENST00000594668 SLC16A10Q8TF71 515 aa11.87□□□□□ -0.51
ZNF548-203ENST00000594668 RCAN3Q9UKA8 241 aa11.87□□□□□ -0.51
ZNF548-203ENST00000594668 NOB1Q9ULX3 412 aaKnown RBP11.87□□□□□ -0.51
ZNF548-203ENST00000594668 ATF5Q9Y2D1 282 aaPredicted RBP11.87□□□□□ -0.51
ZNF548-203ENST00000594668 PI4KAP2A4QPH2 592 aa11.86□□□□□ -0.51
ZNF548-203ENST00000594668 TM4SF1P30408 202 aa11.86□□□□□ -0.51
ZNF548-203ENST00000594668 FKBP5Q13451 457 aaPredicted RBP11.86□□□□□ -0.51
ZNF548-203ENST00000594668 TBC1D9BQ66K14 1250 aa11.86□□□□□ -0.51
ZNF548-203ENST00000594668 CLEC4GQ6UXB4 293 aa11.86□□□□□ -0.51
ZNF548-203ENST00000594668 KSR2Q6VAB6 950 aa11.86□□□□□ -0.51
ZNF548-203ENST00000594668 GIGYF2Q6Y7W6 1299 aaKnown RBP11.86□□□□□ -0.51
ZNF548-203ENST00000594668 RIC3Q7Z5B4 369 aa11.86□□□□□ -0.51
ZNF548-203ENST00000594668 PI4KAP1Q8N8J0 262 aa11.86□□□□□ -0.51
ZNF548-203ENST00000594668 MAP3K2Q9Y2U5 619 aa11.86□□□□□ -0.51
ZNF548-203ENST00000594668 ADCY9O60503 1353 aa11.86□□□□□ -0.51
ZNF548-203ENST00000594668 F6X3S4 739 aa11.85□□□□□ -0.51
ZNF548-203ENST00000594668 DDX58O95786 925 aaKnown RBP11.85□□□□□ -0.51
ZNF548-203ENST00000594668 TCIRG1Q13488 830 aa11.85□□□□□ -0.51
ZNF548-203ENST00000594668 NFIXQ14938 502 aa11.85□□□□□ -0.51
ZNF548-203ENST00000594668 BICDL1Q6ZP65 573 aa11.85□□□□□ -0.51
ZNF548-203ENST00000594668 NLGN1Q8N2Q7 840 aa11.85□□□□□ -0.51
ZNF548-203ENST00000594668 MTFR1LQ9H019 292 aa11.85□□□□□ -0.51
ZNF548-203ENST00000594668 N4BP2Q86UW6 1770 aaPredicted RBP11.84□□□□□ -0.51
ZNF548-203ENST00000594668 RGL2O15211 777 aa11.84□□□□□ -0.51
ZNF548-203ENST00000594668 ZNF34Q8IZ26 560 aa11.84□□□□□ -0.51
ZNF548-203ENST00000594668 METTL22Q9BUU2 404 aaPredicted RBP11.84□□□□□ -0.51
ZNF548-203ENST00000594668 TNNQ9UQP3 1299 aa11.84□□□□□ -0.51
ZNF548-203ENST00000594668 ZNF652Q9Y2D9 606 aa11.84□□□□□ -0.51
ZNF548-203ENST00000594668 PTPRCP08575 1304 aa11.84□□□□□ -0.51
ZNF548-203ENST00000594668 NRXN2Q9P2S2 1712 aa11.83□□□□□ -0.52
ZNF548-203ENST00000594668 ATP5J2-PTCD1G3V325 749 aa11.83□□□□□ -0.52
ZNF548-203ENST00000594668 GPTP24298 496 aa11.83□□□□□ -0.52
ZNF548-203ENST00000594668 DDR1Q08345 913 aa11.83□□□□□ -0.52
ZNF548-203ENST00000594668 DNAAF4Q8WXU2 420 aa11.83□□□□□ -0.52
ZNF548-203ENST00000594668 FRAT1Q92837 279 aaPredicted RBP11.83□□□□□ -0.52
ZNF548-203ENST00000594668 MYD88Q99836 296 aa11.83□□□□□ -0.52
ZNF548-203ENST00000594668 SGIP1Q9BQI5 828 aa11.83□□□□□ -0.52
ZNF548-203ENST00000594668 ISCA1Q9BUE6 129 aa11.83□□□□□ -0.52
ZNF548-203ENST00000594668 NIP7Q9Y221 180 aaKnown RBP eCLIP11.83□□□□□ -0.52
ZNF548-203ENST00000594668 POLRMTO00411 1230 aaKnown RBP11.82□□□□□ -0.52
ZNF548-203ENST00000594668 MMP10P09238 476 aa11.82□□□□□ -0.52
ZNF548-203ENST00000594668 PTGER2P43116 358 aa11.82□□□□□ -0.52
ZNF548-203ENST00000594668 HSP90AB3PQ58FF7 597 aa11.82□□□□□ -0.52
ZNF548-203ENST00000594668 ARHGAP45Q92619 1136 aa11.82□□□□□ -0.52
ZNF548-203ENST00000594668 SETDB2Q96T68 719 aa11.82□□□□□ -0.52
ZNF548-203ENST00000594668 ATP10DQ9P241 1426 aa11.82□□□□□ -0.52
ZNF548-203ENST00000594668 UBN2Q6ZU65 1347 aa11.82□□□□□ -0.52
ZNF548-203ENST00000594668 ANKRD31Q8N7Z5 1873 aa11.81□□□□□ -0.52
ZNF548-203ENST00000594668 FAM177BA6PVY3 158 aa11.81□□□□□ -0.52
ZNF548-203ENST00000594668 PLIN1O60240 522 aa11.81□□□□□ -0.52
ZNF548-203ENST00000594668 IGKV5-2P06315 115 aa11.81□□□□□ -0.52
ZNF548-203ENST00000594668 TRIM27P14373 513 aa11.81□□□□□ -0.52
ZNF548-203ENST00000594668 CWF19L2Q2TBE0 894 aaKnown RBP11.81□□□□□ -0.52
ZNF548-203ENST00000594668 SUSD4Q5VX71 490 aa11.81□□□□□ -0.52
ZNF548-203ENST00000594668 SLC4A10Q6U841 1118 aa11.81□□□□□ -0.52
ZNF548-203ENST00000594668 ATF7IPQ6VMQ6 1270 aa11.81□□□□□ -0.52
ZNF548-203ENST00000594668 SPON1Q9HCB6 807 aa11.81□□□□□ -0.52
ZNF548-203ENST00000594668 KIF16BQ96L93 1317 aa11.81□□□□□ -0.52
ZNF548-203ENST00000594668 KIF13BQ9NQT8 1826 aa11.81□□□□□ -0.52
ZNF548-203ENST00000594668 LAMB2P55268 1798 aa11.8□□□□□ -0.52
ZNF548-203ENST00000594668 IPO8O15397 1037 aaKnown RBP11.8□□□□□ -0.52
ZNF548-203ENST00000594668 SERPINB2P05120 415 aa11.8□□□□□ -0.52
ZNF548-203ENST00000594668 TRIM28Q13263 835 aaKnown RBP11.8□□□□□ -0.52
ZNF548-203ENST00000594668 BEND3Q5T5X7 828 aa11.8□□□□□ -0.52
ZNF548-203ENST00000594668 ZKSCAN2Q63HK3 967 aa11.8□□□□□ -0.52
ZNF548-203ENST00000594668 NLRP10Q86W26 655 aa11.8□□□□□ -0.52
ZNF548-203ENST00000594668 API5Q9BZZ5 524 aaKnown RBP11.8□□□□□ -0.52
ZNF548-203ENST00000594668 PARP3Q9Y6F1 533 aa11.8□□□□□ -0.52
ZNF548-203ENST00000594668 DDX60Q8IY21 1712 aaKnown RBP11.8□□□□□ -0.52
ZNF548-203ENST00000594668 MYH3P11055 1940 aa11.8□□□□□ -0.52
ZNF548-203ENST00000594668 NEURL1BA8MQ27 555 aa11.79□□□□□ -0.52
ZNF548-203ENST00000594668 NEXNQ0ZGT2 675 aa11.79□□□□□ -0.52
ZNF548-203ENST00000594668 SYNE4Q8N205 404 aa11.79□□□□□ -0.52
ZNF548-203ENST00000594668 CCDC24Q8N4L8 307 aa11.79□□□□□ -0.52
ZNF548-203ENST00000594668 CLUAP1Q96AJ1 413 aa11.79□□□□□ -0.52
ZNF548-203ENST00000594668 CARMIL3Q8ND23 1372 aa11.79□□□□□ -0.52
ZNF548-203ENST00000594668 RLBP1P12271 317 aa11.78□□□□□ -0.52
ZNF548-203ENST00000594668 POLD1P28340 1107 aa11.78□□□□□ -0.52
ZNF548-203ENST00000594668 PARP10Q53GL7 1025 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms