RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 TTLL7Q6ZT98 887 aa26.1■■□□□ 1.77
PNKP-203ENST00000593946 ANKRD44Q8N8A2 993 aa26.1■■□□□ 1.77
PNKP-203ENST00000593946 CEP85Q6P2H3 762 aa26.09■■□□□ 1.77
PNKP-203ENST00000593946 KRT27Q7Z3Y8 459 aa26.09■■□□□ 1.77
PNKP-203ENST00000593946 RPAP2Q8IXW5 612 aaPredicted RBP26.09■■□□□ 1.77
PNKP-203ENST00000593946 IGKV5-2P06315 115 aa26.08■■□□□ 1.77
PNKP-203ENST00000593946 NEXNQ0ZGT2 675 aa26.08■■□□□ 1.77
PNKP-203ENST00000593946 ITPK1Q13572 414 aa26.08■■□□□ 1.77
PNKP-203ENST00000593946 CWF19L2Q2TBE0 894 aaKnown RBP26.08■■□□□ 1.77
PNKP-203ENST00000593946 UBTFL1P0CB47 393 aaPredicted RBP26.08■■□□□ 1.76
PNKP-203ENST00000593946 SMC5Q8IY18 1101 aa26.08■■□□□ 1.76
PNKP-203ENST00000593946 ZBTB1Q9Y2K1 713 aa26.08■■□□□ 1.76
PNKP-203ENST00000593946 MYD88Q99836 296 aa26.06■■□□□ 1.76
PNKP-203ENST00000593946 TAF1LQ8IZX4 1826 aa26.06■■□□□ 1.76
PNKP-203ENST00000593946 NEURL1BA8MQ27 555 aa26.05■■□□□ 1.76
PNKP-203ENST00000593946 NBPF7P0C2Y1 421 aaPredicted RBP26.05■■□□□ 1.76
PNKP-203ENST00000593946 FAM196AQ6ZSG2 479 aa26.05■■□□□ 1.76
PNKP-203ENST00000593946 CCDC87Q9NVE4 849 aa26.05■■□□□ 1.76
PNKP-203ENST00000593946 IL6STP40189 918 aaPredicted RBP26.04■■□□□ 1.76
PNKP-203ENST00000593946 CRKLP46109 303 aaKnown RBP26.04■■□□□ 1.76
PNKP-203ENST00000593946 INTS5Q6P9B9 1019 aaKnown RBP26.04■■□□□ 1.76
PNKP-203ENST00000593946 BCL11BQ9C0K0 894 aaPredicted RBP26.04■■□□□ 1.76
PNKP-203ENST00000593946 LRRFIP2Q9Y608 721 aaKnown RBP26.04■■□□□ 1.76
PNKP-203ENST00000593946 UTYO14607 1347 aa26.04■■□□□ 1.76
PNKP-203ENST00000593946 ANKRD36CQ5JPF3 1778 aa26.04■■□□□ 1.76
PNKP-203ENST00000593946 SKAP1Q86WV1 359 aa26.03■■□□□ 1.76
PNKP-203ENST00000593946 RGS17Q9UGC6 210 aaPredicted RBP26.03■■□□□ 1.76
PNKP-203ENST00000593946 NUP98P52948 1817 aa26.03■■□□□ 1.76
PNKP-203ENST00000593946 RXRBP28702 533 aa26.02■■□□□ 1.76
PNKP-203ENST00000593946 C9orf78Q9NZ63 289 aaPredicted RBP26.02■■□□□ 1.76
PNKP-203ENST00000593946 ZNF330Q9Y3S2 320 aaPredicted RBP26.02■■□□□ 1.76
PNKP-203ENST00000593946 GRM8O00222 908 aa26.02■■□□□ 1.76
PNKP-203ENST00000593946 GCKRQ14397 625 aa26.02■■□□□ 1.76
PNKP-203ENST00000593946 GCC1Q96CN9 775 aa26.02■■□□□ 1.76
PNKP-203ENST00000593946 ZBTB3Q9H5J0 574 aa26.02■■□□□ 1.76
PNKP-203ENST00000593946 KIF6Q6ZMV9 814 aa26.01■■□□□ 1.75
PNKP-203ENST00000593946 EIF5P55010 431 aaKnown RBP26■■□□□ 1.75
PNKP-203ENST00000593946 PDZRN3Q9UPQ7 1066 aa26■■□□□ 1.75
PNKP-203ENST00000593946 MAP3K15Q6ZN16 1313 aa26■■□□□ 1.75
PNKP-203ENST00000593946 HMMRO75330 724 aa25.99■■□□□ 1.75
PNKP-203ENST00000593946 LINC00116Q8NCU8 138 aa25.99■■□□□ 1.75
PNKP-203ENST00000593946 ATP5J2-PTCD1G3V325 749 aa25.98■■□□□ 1.75
PNKP-203ENST00000593946 ATP8B2P98198 1209 aa25.98■■□□□ 1.75
PNKP-203ENST00000593946 DCTPP1Q9H773 170 aa25.98■■□□□ 1.75
PNKP-203ENST00000593946 HDAC5Q9UQL6 1122 aa25.98■■□□□ 1.75
PNKP-203ENST00000593946 CNTNAP4Q9C0A0 1308 aa25.97■■□□□ 1.75
PNKP-203ENST00000593946 BCORQ6W2J9 1755 aa25.95■■□□□ 1.74
PNKP-203ENST00000593946 PNMA6EA0A0J9YXQ4 647 aa25.95■■□□□ 1.74
PNKP-203ENST00000593946 KCNQ4P56696 695 aa25.95■■□□□ 1.74
PNKP-203ENST00000593946 NUCB1Q02818 461 aa25.95■■□□□ 1.74
PNKP-203ENST00000593946 TCIRG1Q13488 830 aa25.95■■□□□ 1.74
PNKP-203ENST00000593946 POTEAQ6S8J7 498 aa25.95■■□□□ 1.74
PNKP-203ENST00000593946 GIGYF2Q6Y7W6 1299 aaKnown RBP25.95■■□□□ 1.74
PNKP-203ENST00000593946 NPM2Q86SE8 214 aaKnown RBP25.95■■□□□ 1.74
PNKP-203ENST00000593946 ISCA1Q9BUE6 129 aa25.95■■□□□ 1.74
PNKP-203ENST00000593946 CCNL1Q9UK58 526 aaPredicted RBP25.95■■□□□ 1.74
PNKP-203ENST00000593946 ERVV-1B6SEH8 477 aa25.94■■□□□ 1.74
PNKP-203ENST00000593946 DZIP3Q86Y13 1208 aaKnown RBP25.94■■□□□ 1.74
PNKP-203ENST00000593946 CCDC191Q8NCU4 936 aa25.94■■□□□ 1.74
PNKP-203ENST00000593946 MTX1Q13505 466 aa25.94■■□□□ 1.74
PNKP-203ENST00000593946 COL15A1P39059 1388 aa25.93■■□□□ 1.74
PNKP-203ENST00000593946 TRIM28Q13263 835 aaKnown RBP25.93■■□□□ 1.74
PNKP-203ENST00000593946 RC3H1Q5TC82 1133 aaKnown RBP25.93■■□□□ 1.74
PNKP-203ENST00000593946 SSH3Q8TE77 659 aa25.93■■□□□ 1.74
PNKP-203ENST00000593946 KAZALD1Q96I82 304 aa25.93■■□□□ 1.74
PNKP-203ENST00000593946 SUCLG2Q96I99 432 aa25.93■■□□□ 1.74
PNKP-203ENST00000593946 CWC25Q9NXE8 425 aaPredicted RBP25.93■■□□□ 1.74
PNKP-203ENST00000593946 C4BP0C0L5 1744 aa25.93■■□□□ 1.74
PNKP-203ENST00000593946 TRIM37O94972 964 aa25.92■■□□□ 1.74
PNKP-203ENST00000593946 RGS3P49796 1198 aa25.92■■□□□ 1.74
PNKP-203ENST00000593946 ARXQ96QS3 562 aa25.92■■□□□ 1.74
PNKP-203ENST00000593946 A0A087WZG4 1122 aa25.91■■□□□ 1.74
PNKP-203ENST00000593946 POLA2Q14181 598 aa25.91■■□□□ 1.74
PNKP-203ENST00000593946 HLFQ16534 295 aa25.91■■□□□ 1.74
PNKP-203ENST00000593946 PPP1R42Q7Z4L9 355 aa25.91■■□□□ 1.74
PNKP-203ENST00000593946 TBC1D2BQ9UPU7 963 aa25.91■■□□□ 1.74
PNKP-203ENST00000593946 CASP7P55210 303 aa25.91■■□□□ 1.74
PNKP-203ENST00000593946 HSP90AB3PQ58FF7 597 aa25.91■■□□□ 1.74
PNKP-203ENST00000593946 CHD1LQ86WJ1 897 aa25.91■■□□□ 1.74
PNKP-203ENST00000593946 UBE3BQ7Z3V4 1068 aa25.9■■□□□ 1.74
PNKP-203ENST00000593946 H7C1W4 665 aa25.89■■□□□ 1.74
PNKP-203ENST00000593946 ANKRD45Q5TZF3 282 aa25.89■■□□□ 1.74
PNKP-203ENST00000593946 SCN7AQ01118 1682 aa25.89■■□□□ 1.73
PNKP-203ENST00000593946 SRGAP3O43295 1099 aa25.88■■□□□ 1.73
PNKP-203ENST00000593946 BICC1Q9H694 974 aaKnown RBP25.88■■□□□ 1.73
PNKP-203ENST00000593946 PDE4AP27815 886 aa25.88■■□□□ 1.73
PNKP-203ENST00000593946 LNPKQ9C0E8 428 aa25.87■■□□□ 1.73
PNKP-203ENST00000593946 TNS1Q9HBL0 1735 aaKnown RBP25.87■■□□□ 1.73
PNKP-203ENST00000593946 CAMTA2O94983 1202 aa25.86■■□□□ 1.73
PNKP-203ENST00000593946 JARID2Q92833 1246 aaPredicted RBP25.85■■□□□ 1.73
PNKP-203ENST00000593946 LRRC4BQ9NT99 713 aa25.85■■□□□ 1.73
PNKP-203ENST00000593946 RPS6KA4O75676 772 aa25.85■■□□□ 1.73
PNKP-203ENST00000593946 EPHA10Q5JZY3 1008 aa25.85■■□□□ 1.73
PNKP-203ENST00000593946 C4AP0C0L4 1744 aa25.85■■□□□ 1.73
PNKP-203ENST00000593946 UBR3Q6ZT12 1888 aa25.84■■□□□ 1.73
PNKP-203ENST00000593946 SLC27A3Q5K4L6 730 aa25.84■■□□□ 1.73
PNKP-203ENST00000593946 NLRP10Q86W26 655 aa25.84■■□□□ 1.73
PNKP-203ENST00000593946 EXOC6BQ9Y2D4 811 aa25.84■■□□□ 1.73
PNKP-203ENST00000593946 MYH3P11055 1940 aa25.83■■□□□ 1.73
PNKP-203ENST00000593946 RABL6Q3YEC7 729 aaPredicted RBP25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms