RNA–Protein interactions for RNA: ENST00000593708.1

USF2-204, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 3

Gene USF2, Length 474 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-204ENST00000593708 RTF1Q92541 710 aaKnown RBP28.79■■■□□ 2.2
USF2-204ENST00000593708 LAMB4A4D0S4 1761 aa28.79■■■□□ 2.2
USF2-204ENST00000593708 SNRPA1P09661 255 aaKnown RBP28.78■■■□□ 2.2
USF2-204ENST00000593708 NBPF26B4DH59 902 aa28.77■■■□□ 2.2
USF2-204ENST00000593708 NBPF10Q6P3W6 841 aaKnown RBP28.77■■■□□ 2.2
USF2-204ENST00000593708 NPM2Q86SE8 214 aaKnown RBP28.77■■■□□ 2.2
USF2-204ENST00000593708 NBPF15Q8N660 670 aa28.77■■■□□ 2.2
USF2-204ENST00000593708 PDZRN3Q9UPQ7 1066 aa28.77■■■□□ 2.2
USF2-204ENST00000593708 KDM3BQ7LBC6 1761 aa28.76■■■□□ 2.19
USF2-204ENST00000593708 SRGNP10124 158 aa28.74■■■□□ 2.19
USF2-204ENST00000593708 ST5P78524 1137 aa28.74■■■□□ 2.19
USF2-204ENST00000593708 SMC1BQ8NDV3 1235 aa28.74■■■□□ 2.19
USF2-204ENST00000593708 NPHP1O15259 732 aa28.73■■■□□ 2.19
USF2-204ENST00000593708 HTATSF1O43719 755 aaKnown RBP28.73■■■□□ 2.19
USF2-204ENST00000593708 PRPF40BQ6NWY9 871 aaKnown RBP28.73■■■□□ 2.19
USF2-204ENST00000593708 MIS18AQ9NYP9 233 aa28.73■■■□□ 2.19
USF2-204ENST00000593708 POTECB2RU33 542 aa28.72■■■□□ 2.19
USF2-204ENST00000593708 VEGFAP15692 232 aaPredicted RBP28.72■■■□□ 2.19
USF2-204ENST00000593708 STYK1Q6J9G0 422 aa28.72■■■□□ 2.19
USF2-204ENST00000593708 CLEC4GQ6UXB4 293 aa28.71■■■□□ 2.19
USF2-204ENST00000593708 NBPF5PQ86XG9 351 aaPredicted RBP28.71■■■□□ 2.19
USF2-204ENST00000593708 KLRG1Q96E93 195 aa28.71■■■□□ 2.19
USF2-204ENST00000593708 CNKSR1Q969H4 720 aa28.7■■■□□ 2.18
USF2-204ENST00000593708 TAOK3Q9H2K8 898 aa28.7■■■□□ 2.18
USF2-204ENST00000593708 LTBP3Q9NS15 1303 aa28.69■■■□□ 2.18
USF2-204ENST00000593708 TAF7Q15545 349 aaPredicted RBP28.69■■■□□ 2.18
USF2-204ENST00000593708 ERFEQ4G0M1 354 aa28.69■■■□□ 2.18
USF2-204ENST00000593708 MASTLQ96GX5 879 aa28.69■■■□□ 2.18
USF2-204ENST00000593708 ZNF652Q9Y2D9 606 aa28.68■■■□□ 2.18
USF2-204ENST00000593708 NUP98P52948 1817 aa28.66■■■□□ 2.18
USF2-204ENST00000593708 HLFQ16534 295 aa28.66■■■□□ 2.18
USF2-204ENST00000593708 JMYQ8N9B5 988 aa28.66■■■□□ 2.18
USF2-204ENST00000593708 C7orf43Q8WVR3 580 aa28.66■■■□□ 2.18
USF2-204ENST00000593708 PLEKHF1Q96S99 279 aa28.66■■■□□ 2.18
USF2-204ENST00000593708 NIP7Q9Y221 180 aaKnown RBP eCLIP28.66■■■□□ 2.18
USF2-204ENST00000593708 KLRG2A4D1S0 409 aaPredicted RBP28.64■■■□□ 2.18
USF2-204ENST00000593708 THUMPD2Q9BTF0 503 aaKnown RBP28.64■■■□□ 2.18
USF2-204ENST00000593708 FAM177BA6PVY3 158 aa28.63■■■□□ 2.17
USF2-204ENST00000593708 RGL2O15211 777 aa28.63■■■□□ 2.17
USF2-204ENST00000593708 DPY19L2Q6NUT2 758 aa28.62■■■□□ 2.17
USF2-204ENST00000593708 OLFM4Q6UX06 510 aa28.62■■■□□ 2.17
USF2-204ENST00000593708 NPR1P16066 1061 aa28.61■■■□□ 2.17
USF2-204ENST00000593708 NFE2L2Q16236 605 aa28.6■■■□□ 2.17
USF2-204ENST00000593708 SOGA3Q5TF21 947 aa28.6■■■□□ 2.17
USF2-204ENST00000593708 TPTE2Q6XPS3 522 aa28.6■■■□□ 2.17
USF2-204ENST00000593708 ABCC12Q96J65 1359 aa28.6■■■□□ 2.17
USF2-204ENST00000593708 DDNO94850 711 aaPredicted RBP28.59■■■□□ 2.17
USF2-204ENST00000593708 EIF4A1P60842 406 aaKnown RBP28.59■■■□□ 2.17
USF2-204ENST00000593708 NGEFQ8N5V2 710 aa28.58■■■□□ 2.17
USF2-204ENST00000593708 POTEIP0CG38 1075 aa28.57■■■□□ 2.16
USF2-204ENST00000593708 POTEJP0CG39 1038 aa28.57■■■□□ 2.16
USF2-204ENST00000593708 CCDC93Q567U6 631 aa28.57■■■□□ 2.16
USF2-204ENST00000593708 TTLL7Q6ZT98 887 aa28.56■■■□□ 2.16
USF2-204ENST00000593708 PNISRQ8TF01 805 aaKnown RBP28.56■■■□□ 2.16
USF2-204ENST00000593708 SCN4AP35499 1836 aa28.55■■■□□ 2.16
USF2-204ENST00000593708 NEFMP07197 916 aa28.55■■■□□ 2.16
USF2-204ENST00000593708 SNED1Q8TER0 1413 aa28.54■■■□□ 2.16
USF2-204ENST00000593708 MAP3K15Q6ZN16 1313 aa28.54■■■□□ 2.16
USF2-204ENST00000593708 ZNF277Q9NRM2 450 aaPredicted RBP28.54■■■□□ 2.16
USF2-204ENST00000593708 RRP7AQ9Y3A4 280 aaKnown RBP28.54■■■□□ 2.16
USF2-204ENST00000593708 FKBP4Q02790 459 aaKnown RBP eCLIP28.53■■■□□ 2.16
USF2-204ENST00000593708 NUTM1Q86Y26 1132 aa28.53■■■□□ 2.16
USF2-204ENST00000593708 UBN2Q6ZU65 1347 aa28.52■■■□□ 2.16
USF2-204ENST00000593708 ZNF541Q9H0D2 1346 aa28.52■■■□□ 2.16
USF2-204ENST00000593708 ERVV-1B6SEH8 477 aa28.52■■■□□ 2.16
USF2-204ENST00000593708 MYL6BP14649 208 aa28.51■■■□□ 2.15
USF2-204ENST00000593708 CRY2Q49AN0 593 aa28.51■■■□□ 2.15
USF2-204ENST00000593708 MAPK8IP3Q9UPT6 1336 aa28.5■■■□□ 2.15
USF2-204ENST00000593708 COL13A1Q5TAT6 717 aaPredicted RBP28.5■■■□□ 2.15
USF2-204ENST00000593708 CHADLQ6NUI6 762 aa28.5■■■□□ 2.15
USF2-204ENST00000593708 L3MBTL3Q96JM7 780 aaPredicted RBP28.5■■■□□ 2.15
USF2-204ENST00000593708 ZBTB3Q9H5J0 574 aa28.5■■■□□ 2.15
USF2-204ENST00000593708 GPTP24298 496 aa28.49■■■□□ 2.15
USF2-204ENST00000593708 GTF2E1P29083 439 aaPredicted RBP28.49■■■□□ 2.15
USF2-204ENST00000593708 COL4A5P29400 1685 aa28.48■■■□□ 2.15
USF2-204ENST00000593708 KIF6Q6ZMV9 814 aa28.48■■■□□ 2.15
USF2-204ENST00000593708 SLC51AQ86UW1 340 aa28.48■■■□□ 2.15
USF2-204ENST00000593708 RIC1Q4ADV7 1423 aa28.48■■■□□ 2.15
USF2-204ENST00000593708 IBTKQ9P2D0 1353 aaPredicted RBP28.48■■■□□ 2.15
USF2-204ENST00000593708 RTKN2Q8IZC4 609 aa28.47■■■□□ 2.15
USF2-204ENST00000593708 NYXQ9GZU5 481 aa28.47■■■□□ 2.15
USF2-204ENST00000593708 ADAMTSL1Q8N6G6 1762 aa28.47■■■□□ 2.15
USF2-204ENST00000593708 ALDH1B1P30837 517 aa28.46■■■□□ 2.15
USF2-204ENST00000593708 LRP10Q7Z4F1 713 aa28.46■■■□□ 2.15
USF2-204ENST00000593708 TAF1DQ9H5J8 278 aaPredicted RBP28.46■■■□□ 2.15
USF2-204ENST00000593708 SUSD4Q5VX71 490 aa28.45■■■□□ 2.14
USF2-204ENST00000593708 IQCA1LA6NCM1 817 aa28.44■■■□□ 2.14
USF2-204ENST00000593708 IARSP41252 1262 aaKnown RBP28.44■■■□□ 2.14
USF2-204ENST00000593708 C3orf67Q6ZVT6 689 aa28.44■■■□□ 2.14
USF2-204ENST00000593708 ZNF34Q8IZ26 560 aa28.44■■■□□ 2.14
USF2-204ENST00000593708 SYNE4Q8N205 404 aa28.44■■■□□ 2.14
USF2-204ENST00000593708 TSPYL4Q9UJ04 414 aa28.44■■■□□ 2.14
USF2-204ENST00000593708 PDIA6Q15084 440 aa28.43■■■□□ 2.14
USF2-204ENST00000593708 PROSER3Q2NL68 480 aa28.43■■■□□ 2.14
USF2-204ENST00000593708 PNNQ9H307 717 aaKnown RBP28.43■■■□□ 2.14
USF2-204ENST00000593708 ERBB4Q15303 1308 aa28.43■■■□□ 2.14
USF2-204ENST00000593708 NTSR2O95665 410 aa28.42■■■□□ 2.14
USF2-204ENST00000593708 HOXA10P31260 410 aaPredicted RBP28.42■■■□□ 2.14
USF2-204ENST00000593708 ANKRD36CQ5JPF3 1778 aa28.42■■■□□ 2.14
USF2-204ENST00000593708 FZD9O00144 591 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms