RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 HYPKQ9NX55 129 aa12.81□□□□□ -0.36
TPM4-216ENST00000592822 NUP98P52948 1817 aa12.81□□□□□ -0.36
TPM4-216ENST00000592822 CACNA1FO60840 1977 aa12.8□□□□□ -0.36
TPM4-216ENST00000592822 TM4SF1P30408 202 aa12.8□□□□□ -0.36
TPM4-216ENST00000592822 MAP3K15Q6ZN16 1313 aa12.8□□□□□ -0.36
TPM4-216ENST00000592822 ERVV-1B6SEH8 477 aa12.79□□□□□ -0.36
TPM4-216ENST00000592822 RGL2O15211 777 aa12.79□□□□□ -0.36
TPM4-216ENST00000592822 MMP10P09238 476 aa12.79□□□□□ -0.36
TPM4-216ENST00000592822 POLD1P28340 1107 aa12.79□□□□□ -0.36
TPM4-216ENST00000592822 DDR1Q08345 913 aa12.79□□□□□ -0.36
TPM4-216ENST00000592822 AIMP1Q12904 312 aaKnown RBP12.79□□□□□ -0.36
TPM4-216ENST00000592822 NFIXQ14938 502 aa12.79□□□□□ -0.36
TPM4-216ENST00000592822 HLFQ16534 295 aa12.79□□□□□ -0.36
TPM4-216ENST00000592822 TBC1D9BQ66K14 1250 aa12.79□□□□□ -0.36
TPM4-216ENST00000592822 KIF6Q6ZMV9 814 aa12.79□□□□□ -0.36
TPM4-216ENST00000592822 STK31Q9BXU1 1019 aa12.79□□□□□ -0.36
TPM4-216ENST00000592822 ZBTB3Q9H5J0 574 aa12.79□□□□□ -0.36
TPM4-216ENST00000592822 PHAXQ9H814 394 aaKnown RBP12.79□□□□□ -0.36
TPM4-216ENST00000592822 SLC4A2P04920 1241 aa12.78□□□□□ -0.36
TPM4-216ENST00000592822 CLEC4GQ6UXB4 293 aa12.78□□□□□ -0.36
TPM4-216ENST00000592822 G2E3Q7L622 706 aa12.78□□□□□ -0.36
TPM4-216ENST00000592822 AFDNP55196 1824 aaKnown RBP12.77□□□□□ -0.37
TPM4-216ENST00000592822 BICDL1Q6ZP65 573 aa12.77□□□□□ -0.37
TPM4-216ENST00000592822 ZNF652Q9Y2D9 606 aa12.77□□□□□ -0.37
TPM4-216ENST00000592822 ARFGEF2Q9Y6D5 1785 aa12.76□□□□□ -0.37
TPM4-216ENST00000592822 POLRMTO00411 1230 aaKnown RBP12.76□□□□□ -0.37
TPM4-216ENST00000592822 ANKRD13DQ6ZTN6 518 aa12.76□□□□□ -0.37
TPM4-216ENST00000592822 PLBD2Q8NHP8 589 aa12.76□□□□□ -0.37
TPM4-216ENST00000592822 PARP3Q9Y6F1 533 aa12.76□□□□□ -0.37
TPM4-216ENST00000592822 NRXN2Q9P2S2 1712 aa12.76□□□□□ -0.37
TPM4-216ENST00000592822 ANKRD36CQ5JPF3 1778 aa12.76□□□□□ -0.37
TPM4-216ENST00000592822 CT47B1P0C2W7 299 aaPredicted RBP12.75□□□□□ -0.37
TPM4-216ENST00000592822 GIGYF2Q6Y7W6 1299 aaKnown RBP12.75□□□□□ -0.37
TPM4-216ENST00000592822 ZNF428Q96B54 188 aa12.75□□□□□ -0.37
TPM4-216ENST00000592822 YTHDC1Q96MU7 727 aaKnown RBP12.75□□□□□ -0.37
TPM4-216ENST00000592822 SETDB2Q96T68 719 aa12.75□□□□□ -0.37
TPM4-216ENST00000592822 ATP10DQ9P241 1426 aa12.75□□□□□ -0.37
TPM4-216ENST00000592822 PPP1R1BQ9UD71 204 aaPredicted RBP12.75□□□□□ -0.37
TPM4-216ENST00000592822 NIP7Q9Y221 180 aaKnown RBP eCLIP12.75□□□□□ -0.37
TPM4-216ENST00000592822 SERPINB2P05120 415 aa12.74□□□□□ -0.37
TPM4-216ENST00000592822 FLIIQ13045 1269 aa12.74□□□□□ -0.37
TPM4-216ENST00000592822 ZNF34Q8IZ26 560 aa12.74□□□□□ -0.37
TPM4-216ENST00000592822 MRPL50Q8N5N7 158 aaKnown RBP12.74□□□□□ -0.37
TPM4-216ENST00000592822 SSH1Q8WYL5 1049 aa12.74□□□□□ -0.37
TPM4-216ENST00000592822 KIF13BQ9NQT8 1826 aa12.74□□□□□ -0.37
TPM4-216ENST00000592822 CARMIL3Q8ND23 1372 aa12.73□□□□□ -0.37
TPM4-216ENST00000592822 UBN2Q6ZU65 1347 aa12.73□□□□□ -0.37
TPM4-216ENST00000592822 GPTP24298 496 aa12.73□□□□□ -0.37
TPM4-216ENST00000592822 TCIRG1Q13488 830 aa12.73□□□□□ -0.37
TPM4-216ENST00000592822 ALDH1L2Q3SY69 923 aa12.73□□□□□ -0.37
TPM4-216ENST00000592822 RIC3Q7Z5B4 369 aa12.73□□□□□ -0.37
TPM4-216ENST00000592822 FHDC1Q9C0D6 1143 aaPredicted RBP12.73□□□□□ -0.37
TPM4-216ENST00000592822 C10orf71Q711Q0 1435 aa12.72□□□□□ -0.37
TPM4-216ENST00000592822 ADCY9O60503 1353 aa12.72□□□□□ -0.37
TPM4-216ENST00000592822 PI4KAP2A4QPH2 592 aa12.72□□□□□ -0.37
TPM4-216ENST00000592822 DDX58O95786 925 aaKnown RBP12.72□□□□□ -0.37
TPM4-216ENST00000592822 RARSP54136 660 aaKnown RBP12.72□□□□□ -0.37
TPM4-216ENST00000592822 HSP90AB3PQ58FF7 597 aa12.72□□□□□ -0.37
TPM4-216ENST00000592822 KSR2Q6VAB6 950 aa12.72□□□□□ -0.37
TPM4-216ENST00000592822 PI4KAP1Q8N8J0 262 aa12.72□□□□□ -0.37
TPM4-216ENST00000592822 BCL2L13Q9BXK5 485 aa12.72□□□□□ -0.37
TPM4-216ENST00000592822 MAP3K2Q9Y2U5 619 aa12.72□□□□□ -0.37
TPM4-216ENST00000592822 FKBP5Q13451 457 aaPredicted RBP12.71□□□□□ -0.37
TPM4-216ENST00000592822 SUSD4Q5VX71 490 aa12.71□□□□□ -0.37
TPM4-216ENST00000592822 KLHL34Q8N239 644 aa12.71□□□□□ -0.37
TPM4-216ENST00000592822 SYT17Q9BSW7 474 aa12.71□□□□□ -0.37
TPM4-216ENST00000592822 ISCA1Q9BUE6 129 aa12.71□□□□□ -0.37
TPM4-216ENST00000592822 SMC4Q9NTJ3 1288 aa12.71□□□□□ -0.37
TPM4-216ENST00000592822 CD2APQ9Y5K6 639 aa12.71□□□□□ -0.37
TPM4-216ENST00000592822 KIAA1551Q9HCM1 1747 aa12.71□□□□□ -0.38
TPM4-216ENST00000592822 ANKRD31Q8N7Z5 1873 aa12.7□□□□□ -0.38
TPM4-216ENST00000592822 FAM177BA6PVY3 158 aa12.7□□□□□ -0.38
TPM4-216ENST00000592822 ATP5J2-PTCD1G3V325 749 aa12.7□□□□□ -0.38
TPM4-216ENST00000592822 PRR5LQ6MZQ0 368 aa12.7□□□□□ -0.38
TPM4-216ENST00000592822 NLRP10Q86W26 655 aa12.7□□□□□ -0.38
TPM4-216ENST00000592822 NBPF5PQ86XG9 351 aaPredicted RBP12.7□□□□□ -0.38
TPM4-216ENST00000592822 CCDC24Q8N4L8 307 aa12.7□□□□□ -0.38
TPM4-216ENST00000592822 MYD88Q99836 296 aa12.7□□□□□ -0.38
TPM4-216ENST00000592822 METTL22Q9BUU2 404 aaPredicted RBP12.7□□□□□ -0.38
TPM4-216ENST00000592822 F6X3S4 739 aa12.69□□□□□ -0.38
TPM4-216ENST00000592822 NTSR2O95665 410 aa12.69□□□□□ -0.38
TPM4-216ENST00000592822 BRPF1P55201 1214 aaPredicted RBP12.69□□□□□ -0.38
TPM4-216ENST00000592822 TRIM28Q13263 835 aaKnown RBP12.69□□□□□ -0.38
TPM4-216ENST00000592822 PARP10Q53GL7 1025 aa12.69□□□□□ -0.38
TPM4-216ENST00000592822 TPTE2Q6XPS3 522 aa12.69□□□□□ -0.38
TPM4-216ENST00000592822 CNBD1Q8NA66 436 aa12.69□□□□□ -0.38
TPM4-216ENST00000592822 NLGN2Q8NFZ4 835 aa12.69□□□□□ -0.38
TPM4-216ENST00000592822 IBTKQ9P2D0 1353 aaPredicted RBP12.69□□□□□ -0.38
TPM4-216ENST00000592822 BCAR3O75815 825 aa12.68□□□□□ -0.38
TPM4-216ENST00000592822 IGKV5-2P06315 115 aa12.68□□□□□ -0.38
TPM4-216ENST00000592822 DNAAF4Q8WXU2 420 aa12.68□□□□□ -0.38
TPM4-216ENST00000592822 N4BP2Q86UW6 1770 aaPredicted RBP12.68□□□□□ -0.38
TPM4-216ENST00000592822 PTPRCP08575 1304 aa12.67□□□□□ -0.38
TPM4-216ENST00000592822 PXDNLA1KZ92 1463 aa12.67□□□□□ -0.38
TPM4-216ENST00000592822 ERFEQ4G0M1 354 aa12.67□□□□□ -0.38
TPM4-216ENST00000592822 PPP1R42Q7Z4L9 355 aa12.67□□□□□ -0.38
TPM4-216ENST00000592822 NUTM1Q86Y26 1132 aa12.67□□□□□ -0.38
TPM4-216ENST00000592822 SYNE4Q8N205 404 aa12.67□□□□□ -0.38
TPM4-216ENST00000592822 UTP14AQ9BVJ6 771 aaKnown RBP12.67□□□□□ -0.38
TPM4-216ENST00000592822 NYXQ9GZU5 481 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms