RNA–Protein interactions for RNA: ENST00000591749.1

LAMA3-212, Transcript of laminin subunit alpha 3, humanhuman

TSL 4

Gene LAMA3, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-212ENST00000591749 DZIP3Q86Y13 1208 aaKnown RBP16.3■□□□□ 0.2
LAMA3-212ENST00000591749 PRAMEF22A3QJZ6 481 aa16.29■□□□□ 0.2
LAMA3-212ENST00000591749 NPHP1O15259 732 aa16.29■□□□□ 0.2
LAMA3-212ENST00000591749 DLG5Q8TDM6 1919 aa16.29■□□□□ 0.2
LAMA3-212ENST00000591749 SRGNP10124 158 aa16.28■□□□□ 0.2
LAMA3-212ENST00000591749 ST5P78524 1137 aa16.28■□□□□ 0.2
LAMA3-212ENST00000591749 STYK1Q6J9G0 422 aa16.28■□□□□ 0.2
LAMA3-212ENST00000591749 MCM10Q7L590 875 aa16.28■□□□□ 0.2
LAMA3-212ENST00000591749 CNKSR1Q969H4 720 aa16.28■□□□□ 0.2
LAMA3-212ENST00000591749 NUDCQ9Y266 331 aa16.28■□□□□ 0.2
LAMA3-212ENST00000591749 LTBP3Q9NS15 1303 aa16.27■□□□□ 0.2
LAMA3-212ENST00000591749 SNRPA1P09661 255 aaKnown RBP16.27■□□□□ 0.2
LAMA3-212ENST00000591749 U2AF1L5P0DN76 240 aaPredicted RBP16.27■□□□□ 0.2
LAMA3-212ENST00000591749 U2AF1Q01081 240 aaKnown RBP eCLIP16.27■□□□□ 0.2
LAMA3-212ENST00000591749 COL13A1Q5TAT6 717 aaPredicted RBP16.27■□□□□ 0.2
LAMA3-212ENST00000591749 PRPF40BQ6NWY9 871 aaKnown RBP16.27■□□□□ 0.2
LAMA3-212ENST00000591749 RTF1Q92541 710 aaKnown RBP16.27■□□□□ 0.2
LAMA3-212ENST00000591749 MASTLQ96GX5 879 aa16.27■□□□□ 0.2
LAMA3-212ENST00000591749 TAOK3Q9H2K8 898 aa16.27■□□□□ 0.2
LAMA3-212ENST00000591749 DCTN1Q14203 1278 aa16.26■□□□□ 0.19
LAMA3-212ENST00000591749 CLEC4GQ6UXB4 293 aa16.26■□□□□ 0.19
LAMA3-212ENST00000591749 NUP98P52948 1817 aa16.25■□□□□ 0.19
LAMA3-212ENST00000591749 PPP2R1AP30153 589 aa16.25■□□□□ 0.19
LAMA3-212ENST00000591749 NBPF5PQ86XG9 351 aaPredicted RBP16.25■□□□□ 0.19
LAMA3-212ENST00000591749 SCN4AP35499 1836 aa16.24■□□□□ 0.19
LAMA3-212ENST00000591749 NBPF26B4DH59 902 aa16.24■□□□□ 0.19
LAMA3-212ENST00000591749 DDNO94850 711 aaPredicted RBP16.24■□□□□ 0.19
LAMA3-212ENST00000591749 SOGA3Q5TF21 947 aa16.24■□□□□ 0.19
LAMA3-212ENST00000591749 NBPF10Q6P3W6 841 aaKnown RBP16.24■□□□□ 0.19
LAMA3-212ENST00000591749 NBPF15Q8N660 670 aa16.24■□□□□ 0.19
LAMA3-212ENST00000591749 ZNF652Q9Y2D9 606 aa16.24■□□□□ 0.19
LAMA3-212ENST00000591749 LAMB4A4D0S4 1761 aa16.23■□□□□ 0.19
LAMA3-212ENST00000591749 C7orf43Q8WVR3 580 aa16.23■□□□□ 0.19
LAMA3-212ENST00000591749 HTATSF1O43719 755 aaKnown RBP16.22■□□□□ 0.19
LAMA3-212ENST00000591749 POTEIP0CG38 1075 aa16.22■□□□□ 0.19
LAMA3-212ENST00000591749 POTEJP0CG39 1038 aa16.22■□□□□ 0.19
LAMA3-212ENST00000591749 NIP7Q9Y221 180 aaKnown RBP eCLIP16.22■□□□□ 0.19
LAMA3-212ENST00000591749 KLRG2A4D1S0 409 aaPredicted RBP16.21■□□□□ 0.19
LAMA3-212ENST00000591749 NPR1P16066 1061 aa16.21■□□□□ 0.19
LAMA3-212ENST00000591749 TAF7Q15545 349 aaPredicted RBP16.21■□□□□ 0.19
LAMA3-212ENST00000591749 CHADLQ6NUI6 762 aa16.21■□□□□ 0.19
LAMA3-212ENST00000591749 TPTE2Q6XPS3 522 aa16.21■□□□□ 0.19
LAMA3-212ENST00000591749 KDM3BQ7LBC6 1761 aa16.21■□□□□ 0.18
LAMA3-212ENST00000591749 FAM177BA6PVY3 158 aa16.2■□□□□ 0.18
LAMA3-212ENST00000591749 HSPA1AP0DMV8 641 aaKnown RBP16.2■□□□□ 0.18
LAMA3-212ENST00000591749 HSPA1BP0DMV9 641 aaKnown RBP16.2■□□□□ 0.18
LAMA3-212ENST00000591749 HLFQ16534 295 aa16.2■□□□□ 0.18
LAMA3-212ENST00000591749 CCDC93Q567U6 631 aa16.2■□□□□ 0.18
LAMA3-212ENST00000591749 MIS18AQ9NYP9 233 aa16.2■□□□□ 0.18
LAMA3-212ENST00000591749 RGL2O15211 777 aa16.19■□□□□ 0.18
LAMA3-212ENST00000591749 OLFM4Q6UX06 510 aa16.19■□□□□ 0.18
LAMA3-212ENST00000591749 FKBP4Q02790 459 aaKnown RBP eCLIP16.18■□□□□ 0.18
LAMA3-212ENST00000591749 TNS4Q8IZW8 715 aa16.18■□□□□ 0.18
LAMA3-212ENST00000591749 ZNF277Q9NRM2 450 aaPredicted RBP16.18■□□□□ 0.18
LAMA3-212ENST00000591749 CREBZFQ9NS37 354 aa16.18■□□□□ 0.18
LAMA3-212ENST00000591749 L3MBTL3Q96JM7 780 aaPredicted RBP16.17■□□□□ 0.18
LAMA3-212ENST00000591749 IQCA1LA6NCM1 817 aa16.16■□□□□ 0.18
LAMA3-212ENST00000591749 NGEFQ8N5V2 710 aa16.16■□□□□ 0.18
LAMA3-212ENST00000591749 TAF1DQ9H5J8 278 aaPredicted RBP16.16■□□□□ 0.18
LAMA3-212ENST00000591749 ZNF541Q9H0D2 1346 aa16.16■□□□□ 0.18
LAMA3-212ENST00000591749 CAPN15O75808 1086 aa16.15■□□□□ 0.18
LAMA3-212ENST00000591749 GTF2E1P29083 439 aaPredicted RBP16.15■□□□□ 0.18
LAMA3-212ENST00000591749 ALDH1B1P30837 517 aa16.15■□□□□ 0.18
LAMA3-212ENST00000591749 LDHDQ86WU2 507 aa16.15■□□□□ 0.18
LAMA3-212ENST00000591749 RTKN2Q8IZC4 609 aa16.15■□□□□ 0.18
LAMA3-212ENST00000591749 MKRN1Q9UHC7 482 aaKnown RBP16.15■□□□□ 0.18
LAMA3-212ENST00000591749 SYNE4Q8N205 404 aa16.14■□□□□ 0.17
LAMA3-212ENST00000591749 PASKQ96RG2 1323 aa16.14■□□□□ 0.17
LAMA3-212ENST00000591749 ABCC12Q96J65 1359 aa16.13■□□□□ 0.17
LAMA3-212ENST00000591749 ADAMTSL1Q8N6G6 1762 aa16.13■□□□□ 0.17
LAMA3-212ENST00000591749 ERVV-1B6SEH8 477 aa16.13■□□□□ 0.17
LAMA3-212ENST00000591749 NEFMP07197 916 aa16.13■□□□□ 0.17
LAMA3-212ENST00000591749 IARSP41252 1262 aaKnown RBP16.13■□□□□ 0.17
LAMA3-212ENST00000591749 EIF4A1P60842 406 aaKnown RBP16.13■□□□□ 0.17
LAMA3-212ENST00000591749 TTLL7Q6ZT98 887 aa16.13■□□□□ 0.17
LAMA3-212ENST00000591749 NUTM1Q86Y26 1132 aa16.13■□□□□ 0.17
LAMA3-212ENST00000591749 PNISRQ8TF01 805 aaKnown RBP16.13■□□□□ 0.17
LAMA3-212ENST00000591749 PLEKHF1Q96S99 279 aa16.13■□□□□ 0.17
LAMA3-212ENST00000591749 NYXQ9GZU5 481 aa16.13■□□□□ 0.17
LAMA3-212ENST00000591749 RRP7AQ9Y3A4 280 aaKnown RBP16.13■□□□□ 0.17
LAMA3-212ENST00000591749 MAP3K15Q6ZN16 1313 aa16.13■□□□□ 0.17
LAMA3-212ENST00000591749 SNED1Q8TER0 1413 aa16.12■□□□□ 0.17
LAMA3-212ENST00000591749 FZD9O00144 591 aa16.12■□□□□ 0.17
LAMA3-212ENST00000591749 CRY2Q49AN0 593 aa16.12■□□□□ 0.17
LAMA3-212ENST00000591749 EAPPQ56P03 285 aaPredicted RBP16.12■□□□□ 0.17
LAMA3-212ENST00000591749 THUMPD2Q9BTF0 503 aaKnown RBP16.12■□□□□ 0.17
LAMA3-212ENST00000591749 HACL1Q9UJ83 578 aa16.12■□□□□ 0.17
LAMA3-212ENST00000591749 CNTNAP1P78357 1384 aa16.12■□□□□ 0.17
LAMA3-212ENST00000591749 ITGBL1O95965 494 aaPredicted RBP16.11■□□□□ 0.17
LAMA3-212ENST00000591749 MYL6BP14649 208 aa16.11■□□□□ 0.17
LAMA3-212ENST00000591749 NFE2L2Q16236 605 aa16.11■□□□□ 0.17
LAMA3-212ENST00000591749 GPTP24298 496 aa16.1■□□□□ 0.17
LAMA3-212ENST00000591749 EPHX2P34913 555 aa16.1■□□□□ 0.17
LAMA3-212ENST00000591749 KIF6Q6ZMV9 814 aa16.1■□□□□ 0.17
LAMA3-212ENST00000591749 PSMD1Q99460 953 aa16.1■□□□□ 0.17
LAMA3-212ENST00000591749 CLEC11AQ9Y240 323 aa16.1■□□□□ 0.17
LAMA3-212ENST00000591749 RNF123Q5XPI4 1314 aa16.1■□□□□ 0.17
LAMA3-212ENST00000591749 UBN2Q6ZU65 1347 aa16.1■□□□□ 0.17
LAMA3-212ENST00000591749 COL4A5P29400 1685 aa16.09■□□□□ 0.17
LAMA3-212ENST00000591749 ZBTB3Q9H5J0 574 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms