RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 ATMINO43313 823 aaPredicted RBP12.71□□□□□ -0.37
BRCA1-226ENST00000591534 DDX27Q96GQ7 796 aaKnown RBP12.71□□□□□ -0.37
BRCA1-226ENST00000591534 DIAPH1O60610 1272 aaKnown RBP12.7□□□□□ -0.38
BRCA1-226ENST00000591534 MFSD10Q14728 455 aa12.7□□□□□ -0.38
BRCA1-226ENST00000591534 C9orf131Q5VYM1 1079 aa12.7□□□□□ -0.38
BRCA1-226ENST00000591534 INTS5Q6P9B9 1019 aaKnown RBP12.7□□□□□ -0.38
BRCA1-226ENST00000591534 SRP68Q9UHB9 627 aaKnown RBP12.7□□□□□ -0.38
BRCA1-226ENST00000591534 C4AP0C0L4 1744 aa12.69□□□□□ -0.38
BRCA1-226ENST00000591534 RNMTO43148 476 aaKnown RBP12.69□□□□□ -0.38
BRCA1-226ENST00000591534 STARD3NLO95772 234 aa12.69□□□□□ -0.38
BRCA1-226ENST00000591534 KCNA3P22001 575 aa12.69□□□□□ -0.38
BRCA1-226ENST00000591534 USPL1Q5W0Q7 1092 aa12.69□□□□□ -0.38
BRCA1-226ENST00000591534 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.69□□□□□ -0.38
BRCA1-226ENST00000591534 NPM2Q86SE8 214 aaKnown RBP12.69□□□□□ -0.38
BRCA1-226ENST00000591534 DNAJC10Q8IXB1 793 aa12.69□□□□□ -0.38
BRCA1-226ENST00000591534 TTC5Q8N0Z6 440 aa12.69□□□□□ -0.38
BRCA1-226ENST00000591534 NARFQ9UHQ1 456 aa12.69□□□□□ -0.38
BRCA1-226ENST00000591534 A0A087WZG4 1122 aa12.68□□□□□ -0.38
BRCA1-226ENST00000591534 POLRMTO00411 1230 aaKnown RBP12.68□□□□□ -0.38
BRCA1-226ENST00000591534 SEMA3EO15041 775 aa12.68□□□□□ -0.38
BRCA1-226ENST00000591534 HMOX1P09601 288 aa12.68□□□□□ -0.38
BRCA1-226ENST00000591534 CYP19A1P11511 503 aaPredicted RBP12.68□□□□□ -0.38
BRCA1-226ENST00000591534 TM4SF1P30408 202 aa12.68□□□□□ -0.38
BRCA1-226ENST00000591534 DDR1Q08345 913 aa12.68□□□□□ -0.38
BRCA1-226ENST00000591534 RBM46Q8TBY0 533 aaKnown RBP12.68□□□□□ -0.38
BRCA1-226ENST00000591534 TEX13AQ9BXU3 409 aaPredicted RBP12.68□□□□□ -0.38
BRCA1-226ENST00000591534 LGR6Q9HBX8 967 aa12.68□□□□□ -0.38
BRCA1-226ENST00000591534 SOS1Q07889 1333 aaPredicted RBP12.67□□□□□ -0.38
BRCA1-226ENST00000591534 FSTL1Q12841 308 aa12.67□□□□□ -0.38
BRCA1-226ENST00000591534 RNF181Q9P0P0 153 aa12.67□□□□□ -0.38
BRCA1-226ENST00000591534 PDZRN3Q9UPQ7 1066 aa12.67□□□□□ -0.38
BRCA1-226ENST00000591534 KIF13BQ9NQT8 1826 aa12.67□□□□□ -0.38
BRCA1-226ENST00000591534 KIF7Q2M1P5 1343 aa12.66□□□□□ -0.38
BRCA1-226ENST00000591534 ZC3H4Q9UPT8 1303 aaKnown RBP12.66□□□□□ -0.38
BRCA1-226ENST00000591534 COL5A3P25940 1745 aaPredicted RBP12.66□□□□□ -0.38
BRCA1-226ENST00000591534 POTEB2H3BUK9 544 aa12.66□□□□□ -0.38
BRCA1-226ENST00000591534 TEFQ10587 303 aa12.66□□□□□ -0.38
BRCA1-226ENST00000591534 SLC39A6Q13433 755 aa12.66□□□□□ -0.38
BRCA1-226ENST00000591534 MTHFSDQ2M296 383 aaKnown RBP12.66□□□□□ -0.38
BRCA1-226ENST00000591534 PDCD7Q8N8D1 485 aaKnown RBP12.66□□□□□ -0.38
BRCA1-226ENST00000591534 GAS2L2Q8NHY3 880 aa12.66□□□□□ -0.38
BRCA1-226ENST00000591534 NMRK2Q9NPI5 230 aa12.66□□□□□ -0.38
BRCA1-226ENST00000591534 H0YIN7 160 aa12.65□□□□□ -0.38
BRCA1-226ENST00000591534 CHRNA5P30532 468 aa12.65□□□□□ -0.38
BRCA1-226ENST00000591534 CC2D1BQ5T0F9 858 aaKnown RBP12.65□□□□□ -0.38
BRCA1-226ENST00000591534 COL15A1P39059 1388 aa12.65□□□□□ -0.38
BRCA1-226ENST00000591534 GNAT3A8MTJ3 354 aa12.64□□□□□ -0.39
BRCA1-226ENST00000591534 U2SURPO15042 1029 aaKnown RBP12.64□□□□□ -0.39
BRCA1-226ENST00000591534 SERPINB2P05120 415 aa12.64□□□□□ -0.39
BRCA1-226ENST00000591534 CANXP27824 592 aaKnown RBP12.64□□□□□ -0.39
BRCA1-226ENST00000591534 NFIXQ14938 502 aa12.64□□□□□ -0.39
BRCA1-226ENST00000591534 ASTLQ6HA08 431 aaPredicted RBP12.64□□□□□ -0.39
BRCA1-226ENST00000591534 TTLL6Q8N841 843 aa12.64□□□□□ -0.39
BRCA1-226ENST00000591534 ZBTB1Q9Y2K1 713 aa12.64□□□□□ -0.39
BRCA1-226ENST00000591534 PER1O15534 1290 aaPredicted RBP12.63□□□□□ -0.39
BRCA1-226ENST00000591534 LMNB1P20700 586 aa12.63□□□□□ -0.39
BRCA1-226ENST00000591534 IRX5P78411 483 aaPredicted RBP12.63□□□□□ -0.39
BRCA1-226ENST00000591534 MICALL2Q8IY33 904 aa12.63□□□□□ -0.39
BRCA1-226ENST00000591534 CFAP53Q96M91 514 aa12.63□□□□□ -0.39
BRCA1-226ENST00000591534 N4BP2Q86UW6 1770 aaPredicted RBP12.63□□□□□ -0.39
BRCA1-226ENST00000591534 MRC1P22897 1456 aa12.62□□□□□ -0.39
BRCA1-226ENST00000591534 NPC1L1Q9UHC9 1359 aa12.62□□□□□ -0.39
BRCA1-226ENST00000591534 NPHP1O15259 732 aa12.62□□□□□ -0.39
BRCA1-226ENST00000591534 PDE6BP35913 854 aa12.62□□□□□ -0.39
BRCA1-226ENST00000591534 ZNF790Q6PG37 636 aa12.62□□□□□ -0.39
BRCA1-226ENST00000591534 C2CD5Q86YS7 1000 aa12.62□□□□□ -0.39
BRCA1-226ENST00000591534 RRAGCQ9HB90 399 aa12.62□□□□□ -0.39
BRCA1-226ENST00000591534 EIF5P55010 431 aaKnown RBP12.61□□□□□ -0.39
BRCA1-226ENST00000591534 SMC1BQ8NDV3 1235 aa12.61□□□□□ -0.39
BRCA1-226ENST00000591534 FMNL2Q96PY5 1086 aa12.61□□□□□ -0.39
BRCA1-226ENST00000591534 GPHNQ9NQX3 736 aaPredicted RBP12.61□□□□□ -0.39
BRCA1-226ENST00000591534 NUDCQ9Y266 331 aa12.61□□□□□ -0.39
BRCA1-226ENST00000591534 KIAA1551Q9HCM1 1747 aa12.6□□□□□ -0.39
BRCA1-226ENST00000591534 MYH14Q7Z406 1995 aaKnown RBP12.6□□□□□ -0.39
BRCA1-226ENST00000591534 VEGFAP15692 232 aaPredicted RBP12.6□□□□□ -0.39
BRCA1-226ENST00000591534 IL6STP40189 918 aaPredicted RBP12.6□□□□□ -0.39
BRCA1-226ENST00000591534 PPP1R15BQ5SWA1 713 aa12.6□□□□□ -0.39
BRCA1-226ENST00000591534 BICDL1Q6ZP65 573 aa12.6□□□□□ -0.39
BRCA1-226ENST00000591534 BRIP1Q9BX63 1249 aa12.6□□□□□ -0.39
BRCA1-226ENST00000591534 OCEL1Q9H607 264 aa12.6□□□□□ -0.39
BRCA1-226ENST00000591534 ZNF330Q9Y3S2 320 aaPredicted RBP12.6□□□□□ -0.39
BRCA1-226ENST00000591534 SCN11AQ9UI33 1791 aa12.6□□□□□ -0.39
BRCA1-226ENST00000591534 TJP1Q07157 1748 aa12.59□□□□□ -0.39
BRCA1-226ENST00000591534 TESPA1A2RU30 521 aaPredicted RBP12.59□□□□□ -0.39
BRCA1-226ENST00000591534 GLTPD2A6NH11 291 aa12.59□□□□□ -0.39
BRCA1-226ENST00000591534 CAMK2BQ13554 666 aa12.59□□□□□ -0.39
BRCA1-226ENST00000591534 DNAJC5GQ8N7S2 189 aa12.59□□□□□ -0.39
BRCA1-226ENST00000591534 ZNF496Q96IT1 587 aaPredicted RBP12.59□□□□□ -0.39
BRCA1-226ENST00000591534 SETDB2Q96T68 719 aa12.59□□□□□ -0.39
BRCA1-226ENST00000591534 BCL2L12Q9HB09 334 aa12.59□□□□□ -0.39
BRCA1-226ENST00000591534 CARMIL3Q8ND23 1372 aa12.58□□□□□ -0.4
BRCA1-226ENST00000591534 HEG1Q9ULI3 1381 aa12.58□□□□□ -0.4
BRCA1-226ENST00000591534 KCPQ6ZWJ8 1503 aa12.58□□□□□ -0.4
BRCA1-226ENST00000591534 BTBD11A6QL63 1104 aa12.58□□□□□ -0.4
BRCA1-226ENST00000591534 ST5P78524 1137 aa12.58□□□□□ -0.4
BRCA1-226ENST00000591534 SOGA3Q5TF21 947 aa12.58□□□□□ -0.4
BRCA1-226ENST00000591534 RTF1Q92541 710 aaKnown RBP12.58□□□□□ -0.4
BRCA1-226ENST00000591534 ZNF622Q969S3 477 aaKnown RBP eCLIP12.58□□□□□ -0.45e-8■■■□□ 17.3
BRCA1-226ENST00000591534 KLRG1Q96E93 195 aa12.58□□□□□ -0.4
BRCA1-226ENST00000591534 ARFGEF1Q9Y6D6 1849 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms