RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 DLG5Q8TDM6 1919 aa8.49□□□□□ -1.05
VPS4B-205ENST00000591383 PRKAR2BP31323 418 aa8.49□□□□□ -1.05
VPS4B-205ENST00000591383 FOSBP53539 338 aa8.49□□□□□ -1.05
VPS4B-205ENST00000591383 ZNF530Q6P9A1 599 aaPredicted RBP8.49□□□□□ -1.05
VPS4B-205ENST00000591383 DDX54Q8TDD1 881 aaKnown RBP8.49□□□□□ -1.05
VPS4B-205ENST00000591383 METRNQ9UJH8 293 aa8.49□□□□□ -1.05
VPS4B-205ENST00000591383 BTAF1O14981 1849 aa8.49□□□□□ -1.05
VPS4B-205ENST00000591383 MAPK8IP3Q9UPT6 1336 aa8.49□□□□□ -1.05
VPS4B-205ENST00000591383 PLEKHG2Q9H7P9 1386 aa8.48□□□□□ -1.05
VPS4B-205ENST00000591383 SCN11AQ9UI33 1791 aa8.48□□□□□ -1.05
VPS4B-205ENST00000591383 EXOC5O00471 708 aa8.48□□□□□ -1.05
VPS4B-205ENST00000591383 RAD21O60216 631 aa8.48□□□□□ -1.05
VPS4B-205ENST00000591383 NEFMP07197 916 aa8.48□□□□□ -1.05
VPS4B-205ENST00000591383 PDIA4P13667 645 aaKnown RBP8.48□□□□□ -1.05
VPS4B-205ENST00000591383 CLK2P49760 499 aaKnown RBP8.48□□□□□ -1.05
VPS4B-205ENST00000591383 CCDC184Q52MB2 194 aa8.48□□□□□ -1.05
VPS4B-205ENST00000591383 ZCRB1Q8TBF4 217 aaKnown RBP8.48□□□□□ -1.05
VPS4B-205ENST00000591383 SPG7Q9UQ90 795 aa8.48□□□□□ -1.05
VPS4B-205ENST00000591383 ITGB4P16144 1822 aa8.47□□□□□ -1.05
VPS4B-205ENST00000591383 SPDYE5A6NIY4 337 aa8.47□□□□□ -1.05
VPS4B-205ENST00000591383 PLEKHO1Q53GL0 409 aaPredicted RBP8.47□□□□□ -1.05
VPS4B-205ENST00000591383 C1orf141Q5JVX7 400 aa8.47□□□□□ -1.05
VPS4B-205ENST00000591383 CCDC146Q8IYE0 955 aa8.47□□□□□ -1.05
VPS4B-205ENST00000591383 TBC1D2Q9BYX2 928 aa8.47□□□□□ -1.05
VPS4B-205ENST00000591383 MAP3K5Q99683 1374 aa8.47□□□□□ -1.05
VPS4B-205ENST00000591383 KDM6AO15550 1401 aaPredicted RBP8.46□□□□□ -1.05
VPS4B-205ENST00000591383 MARCH10Q8NA82 808 aaPredicted RBP8.46□□□□□ -1.06
VPS4B-205ENST00000591383 ZDHHC16Q969W1 377 aa8.46□□□□□ -1.06
VPS4B-205ENST00000591383 RBM27Q9P2N5 1060 aaKnown RBP8.46□□□□□ -1.06
VPS4B-205ENST00000591383 COG6Q9Y2V7 657 aa8.46□□□□□ -1.06
VPS4B-205ENST00000591383 CYP27B1O15528 508 aa8.45□□□□□ -1.06
VPS4B-205ENST00000591383 RFC5P40937 340 aa8.45□□□□□ -1.06
VPS4B-205ENST00000591383 AMOTQ4VCS5 1084 aa8.45□□□□□ -1.06
VPS4B-205ENST00000591383 FAM9BQ8IZU0 186 aa8.45□□□□□ -1.06
VPS4B-205ENST00000591383 BANK1Q8NDB2 785 aa8.45□□□□□ -1.06
VPS4B-205ENST00000591383 GAS2L2Q8NHY3 880 aa8.45□□□□□ -1.06
VPS4B-205ENST00000591383 SYTL4Q96C24 671 aaPredicted RBP8.45□□□□□ -1.06
VPS4B-205ENST00000591383 ACSBG1Q96GR2 724 aa8.45□□□□□ -1.06
VPS4B-205ENST00000591383 SNRKQ9NRH2 765 aa8.45□□□□□ -1.06
VPS4B-205ENST00000591383 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.45□□□□□ -1.06
VPS4B-205ENST00000591383 ADAMTS7Q9UKP4 1686 aa8.45□□□□□ -1.06
VPS4B-205ENST00000591383 MRC1P22897 1456 aa8.45□□□□□ -1.06
VPS4B-205ENST00000591383 PAPPAQ13219 1627 aa8.44□□□□□ -1.06
VPS4B-205ENST00000591383 RGPD3A6NKT7 1758 aaPredicted RBP8.44□□□□□ -1.06
VPS4B-205ENST00000591383 SIPA1L3O60292 1781 aaPredicted RBP8.44□□□□□ -1.06
VPS4B-205ENST00000591383 RGPD4Q7Z3J3 1758 aa8.44□□□□□ -1.06
VPS4B-205ENST00000591383 PHKG2P15735 406 aa8.44□□□□□ -1.06
VPS4B-205ENST00000591383 DIXDC1Q155Q3 683 aa8.44□□□□□ -1.06
VPS4B-205ENST00000591383 FAM196AQ6ZSG2 479 aa8.44□□□□□ -1.06
VPS4B-205ENST00000591383 IFNL2Q8IZJ0 200 aa8.44□□□□□ -1.06
VPS4B-205ENST00000591383 ZNF454Q8N9F8 522 aa8.44□□□□□ -1.06
VPS4B-205ENST00000591383 SERPINA10Q9UK55 444 aa8.44□□□□□ -1.06
VPS4B-205ENST00000591383 SENP3-EIF4A1A0A087X0R7 540 aa8.43□□□□□ -1.06
VPS4B-205ENST00000591383 CCER2I3L3R5 266 aa8.43□□□□□ -1.06
VPS4B-205ENST00000591383 TRIM37O94972 964 aa8.43□□□□□ -1.06
VPS4B-205ENST00000591383 PRSS12P56730 875 aa8.43□□□□□ -1.06
VPS4B-205ENST00000591383 MTHFSDQ2M296 383 aaKnown RBP8.43□□□□□ -1.06
VPS4B-205ENST00000591383 RBM46Q8TBY0 533 aaKnown RBP8.43□□□□□ -1.06
VPS4B-205ENST00000591383 PHACTR3Q96KR7 559 aa8.43□□□□□ -1.06
VPS4B-205ENST00000591383 PNNQ9H307 717 aaKnown RBP8.43□□□□□ -1.06
VPS4B-205ENST00000591383 LIMD1Q9UGP4 676 aa8.43□□□□□ -1.06
VPS4B-205ENST00000591383 ADAMTS8Q9UP79 889 aa8.43□□□□□ -1.06
VPS4B-205ENST00000591383 RRP7AQ9Y3A4 280 aaKnown RBP8.43□□□□□ -1.06
VPS4B-205ENST00000591383 RREB1Q92766 1687 aa8.43□□□□□ -1.06
VPS4B-205ENST00000591383 NUP188Q5SRE5 1749 aa8.43□□□□□ -1.06
VPS4B-205ENST00000591383 HSP90AB1P08238 724 aaKnown RBP8.42□□□□□ -1.06
VPS4B-205ENST00000591383 SF3B2Q13435 895 aaKnown RBP8.42□□□□□ -1.06
VPS4B-205ENST00000591383 NFE2L2Q16236 605 aa8.42□□□□□ -1.06
VPS4B-205ENST00000591383 AKAP4Q5JQC9 854 aa8.42□□□□□ -1.06
VPS4B-205ENST00000591383 PPP2R2DQ66LE6 453 aa8.42□□□□□ -1.06
VPS4B-205ENST00000591383 MPRIPQ6WCQ1 1025 aa8.42□□□□□ -1.06
VPS4B-205ENST00000591383 RUNDC1Q96C34 613 aa8.42□□□□□ -1.06
VPS4B-205ENST00000591383 CCDC97Q96F63 343 aaPredicted RBP8.42□□□□□ -1.06
VPS4B-205ENST00000591383 CDCA7LQ96GN5 454 aa8.42□□□□□ -1.06
VPS4B-205ENST00000591383 ADAM33Q9BZ11 813 aa8.42□□□□□ -1.06
VPS4B-205ENST00000591383 BCL9O00512 1426 aa8.42□□□□□ -1.06
VPS4B-205ENST00000591383 TMEM259Q4ZIN3 620 aa8.41□□□□□ -1.06
VPS4B-205ENST00000591383 PNISRQ8TF01 805 aaKnown RBP8.41□□□□□ -1.06
VPS4B-205ENST00000591383 SPIRE2Q8WWL2 714 aa8.41□□□□□ -1.06
VPS4B-205ENST00000591383 RTF1Q92541 710 aaKnown RBP8.41□□□□□ -1.06
VPS4B-205ENST00000591383 DCAF5Q96JK2 942 aa8.41□□□□□ -1.06
VPS4B-205ENST00000591383 TMOD3Q9NYL9 352 aa8.41□□□□□ -1.06
VPS4B-205ENST00000591383 KDM3BQ7LBC6 1761 aa8.4□□□□□ -1.06
VPS4B-205ENST00000591383 UBR2Q8IWV8 1755 aa8.4□□□□□ -1.06
VPS4B-205ENST00000591383 LY75O60449 1722 aa8.4□□□□□ -1.06
VPS4B-205ENST00000591383 C5P01031 1676 aa8.4□□□□□ -1.06
VPS4B-205ENST00000591383 GNAT3A8MTJ3 354 aa8.4□□□□□ -1.06
VPS4B-205ENST00000591383 KCNQ2O43526 872 aa8.4□□□□□ -1.06
VPS4B-205ENST00000591383 POTEIP0CG38 1075 aa8.4□□□□□ -1.06
VPS4B-205ENST00000591383 MCM10Q7L590 875 aa8.4□□□□□ -1.06
VPS4B-205ENST00000591383 PTF1AQ7RTS3 328 aa8.4□□□□□ -1.06
VPS4B-205ENST00000591383 RIC3Q7Z5B4 369 aa8.4□□□□□ -1.06
VPS4B-205ENST00000591383 NECTIN2Q92692 538 aa8.4□□□□□ -1.06
VPS4B-205ENST00000591383 PLEKHF1Q96S99 279 aa8.4□□□□□ -1.06
VPS4B-205ENST00000591383 PLSCR2Q9NRY7 297 aa8.4□□□□□ -1.06
VPS4B-205ENST00000591383 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.39□□□□□ -1.07
VPS4B-205ENST00000591383 APAF1O14727 1248 aa8.39□□□□□ -1.07
VPS4B-205ENST00000591383 BAG6P46379 1132 aa8.39□□□□□ -1.07
VPS4B-205ENST00000591383 CABP4P57796 275 aa8.39□□□□□ -1.07
VPS4B-205ENST00000591383 LMOD3Q0VAK6 560 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms