RNA–Protein interactions for RNA: ENST00000591028.1

NFIX-213, Transcript of nuclear factor I X, humanhuman

TSL 3

Gene NFIX, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-213ENST00000591028 KDM3BQ7LBC6 1761 aa20.62■□□□□ 0.89
NFIX-213ENST00000591028 CARMIL3Q8ND23 1372 aa20.62■□□□□ 0.89
NFIX-213ENST00000591028 ZNF521Q96K83 1311 aa20.62■□□□□ 0.89
NFIX-213ENST00000591028 CANXP27824 592 aaKnown RBP20.62■□□□□ 0.89
NFIX-213ENST00000591028 EIF4A1P60842 406 aaKnown RBP20.62■□□□□ 0.89
NFIX-213ENST00000591028 MBIPQ9NS73 344 aa20.61■□□□□ 0.89
NFIX-213ENST00000591028 COL11A2P13942 1736 aaPredicted RBP20.61■□□□□ 0.89
NFIX-213ENST00000591028 NPM2Q86SE8 214 aaKnown RBP20.6■□□□□ 0.89
NFIX-213ENST00000591028 TIAM2Q8IVF5 1701 aa20.6■□□□□ 0.89
NFIX-213ENST00000591028 TNRC6CQ9HCJ0 1690 aaKnown RBP20.6■□□□□ 0.89
NFIX-213ENST00000591028 ERBB4Q15303 1308 aa20.59■□□□□ 0.89
NFIX-213ENST00000591028 CCDC88AQ3V6T2 1871 aa20.59■□□□□ 0.89
NFIX-213ENST00000591028 MIS18AQ9NYP9 233 aa20.59■□□□□ 0.89
NFIX-213ENST00000591028 RNF181Q9P0P0 153 aa20.59■□□□□ 0.89
NFIX-213ENST00000591028 BCORQ6W2J9 1755 aa20.59■□□□□ 0.89
NFIX-213ENST00000591028 RASSF7Q02833 373 aa20.58■□□□□ 0.89
NFIX-213ENST00000591028 BICDL1Q6ZP65 573 aa20.58■□□□□ 0.89
NFIX-213ENST00000591028 CACNA1SQ13698 1873 aa20.58■□□□□ 0.88
NFIX-213ENST00000591028 SERPINB2P05120 415 aa20.57■□□□□ 0.88
NFIX-213ENST00000591028 ZNF330Q9Y3S2 320 aaPredicted RBP20.57■□□□□ 0.88
NFIX-213ENST00000591028 WDR90Q96KV7 1748 aa20.56■□□□□ 0.88
NFIX-213ENST00000591028 FANCIQ9NVI1 1328 aa20.55■□□□□ 0.88
NFIX-213ENST00000591028 KCNQ3O43525 872 aa20.55■□□□□ 0.88
NFIX-213ENST00000591028 TOMM70O94826 608 aa20.55■□□□□ 0.88
NFIX-213ENST00000591028 EIF5P55010 431 aaKnown RBP20.55■□□□□ 0.88
NFIX-213ENST00000591028 TBC1D9BQ66K14 1250 aa20.53■□□□□ 0.88
NFIX-213ENST00000591028 C2CD5Q86YS7 1000 aa20.53■□□□□ 0.88
NFIX-213ENST00000591028 LAMB4A4D0S4 1761 aa20.52■□□□□ 0.88
NFIX-213ENST00000591028 A0A087WZG4 1122 aa20.52■□□□□ 0.88
NFIX-213ENST00000591028 CT47B1P0C2W7 299 aaPredicted RBP20.52■□□□□ 0.88
NFIX-213ENST00000591028 PRELPP51888 382 aa20.52■□□□□ 0.88
NFIX-213ENST00000591028 DUSP27Q5VZP5 1158 aa20.52■□□□□ 0.88
NFIX-213ENST00000591028 CCDC24Q8N4L8 307 aa20.52■□□□□ 0.88
NFIX-213ENST00000591028 ZNF428Q96B54 188 aa20.52■□□□□ 0.88
NFIX-213ENST00000591028 TBC1D2BQ9UPU7 963 aa20.52■□□□□ 0.88
NFIX-213ENST00000591028 A1BGP04217 495 aa20.51■□□□□ 0.87
NFIX-213ENST00000591028 IL6STP40189 918 aaPredicted RBP20.51■□□□□ 0.87
NFIX-213ENST00000591028 SLFN5Q08AF3 891 aa20.51■□□□□ 0.87
NFIX-213ENST00000591028 HDGFL1Q5TGJ6 251 aa20.51■□□□□ 0.87
NFIX-213ENST00000591028 TSR2Q969E8 191 aaKnown RBP20.51■□□□□ 0.87
NFIX-213ENST00000591028 PIP4K2AP48426 406 aaPredicted RBP20.5■□□□□ 0.87
NFIX-213ENST00000591028 APLP1P51693 650 aa20.5■□□□□ 0.87
NFIX-213ENST00000591028 KDM2BQ8NHM5 1336 aa20.5■□□□□ 0.87
NFIX-213ENST00000591028 TWISTNBQ3B726 338 aaPredicted RBP20.49■□□□□ 0.87
NFIX-213ENST00000591028 CCDC30Q5VVM6 783 aa20.49■□□□□ 0.87
NFIX-213ENST00000591028 C16orf71Q8IYS4 520 aaPredicted RBP20.49■□□□□ 0.87
NFIX-213ENST00000591028 TTLL6Q8N841 843 aa20.49■□□□□ 0.87
NFIX-213ENST00000591028 USP16Q9Y5T5 823 aa20.49■□□□□ 0.87
NFIX-213ENST00000591028 FER1L6Q2WGJ9 1857 aa20.48■□□□□ 0.87
NFIX-213ENST00000591028 PRAMEF22A3QJZ6 481 aa20.48■□□□□ 0.87
NFIX-213ENST00000591028 RBM46Q8TBY0 533 aaKnown RBP20.48■□□□□ 0.87
NFIX-213ENST00000591028 STK31Q9BXU1 1019 aa20.48■□□□□ 0.87
NFIX-213ENST00000591028 RRAGCQ9HB90 399 aa20.48■□□□□ 0.87
NFIX-213ENST00000591028 DBF4Q9UBU7 674 aaPredicted RBP20.48■□□□□ 0.87
NFIX-213ENST00000591028 ARFGEF2Q9Y6D5 1785 aa20.48■□□□□ 0.87
NFIX-213ENST00000591028 DICER1Q9UPY3 1922 aaKnown RBP20.47■□□□□ 0.87
NFIX-213ENST00000591028 H0YIN7 160 aa20.47■□□□□ 0.87
NFIX-213ENST00000591028 NFKBIEO00221 500 aa20.47■□□□□ 0.87
NFIX-213ENST00000591028 RGL2O15211 777 aa20.47■□□□□ 0.87
NFIX-213ENST00000591028 CAMTA2O94983 1202 aa20.47■□□□□ 0.87
NFIX-213ENST00000591028 HTRA3P83110 453 aa20.47■□□□□ 0.87
NFIX-213ENST00000591028 PRR5LQ6MZQ0 368 aa20.47■□□□□ 0.87
NFIX-213ENST00000591028 SLX4Q8IY92 1834 aa20.46■□□□□ 0.87
NFIX-213ENST00000591028 LMNB1P20700 586 aa20.46■□□□□ 0.87
NFIX-213ENST00000591028 TRMT2AQ8IZ69 625 aaKnown RBP20.46■□□□□ 0.87
NFIX-213ENST00000591028 YTHDC1Q96MU7 727 aaKnown RBP20.46■□□□□ 0.87
NFIX-213ENST00000591028 ZNF219Q9P2Y4 722 aaPredicted RBP20.46■□□□□ 0.87
NFIX-213ENST00000591028 PCNTO95613 3336 aa20.46■□□□□ 0.87
NFIX-213ENST00000591028 EIF2S2P20042 333 aaKnown RBP20.45■□□□□ 0.86
NFIX-213ENST00000591028 ZNF622Q969S3 477 aaKnown RBP eCLIP20.45■□□□□ 0.86
NFIX-213ENST00000591028 DDX21Q9NR30 783 aaKnown RBP eCLIP20.45■□□□□ 0.86
NFIX-213ENST00000591028 HYPKQ9NX55 129 aa20.45■□□□□ 0.86
NFIX-213ENST00000591028 EXOSC9Q06265 439 aaKnown RBP20.44■□□□□ 0.86
NFIX-213ENST00000591028 IFFO2Q5TF58 517 aa20.44■□□□□ 0.86
NFIX-213ENST00000591028 DZIP3Q86Y13 1208 aaKnown RBP20.44■□□□□ 0.86
NFIX-213ENST00000591028 C8orf58Q8NAV2 365 aa20.44■□□□□ 0.86
NFIX-213ENST00000591028 SPINK5Q9NQ38 1064 aaPredicted RBP20.44■□□□□ 0.86
NFIX-213ENST00000591028 DNAJC5GQ8N7S2 189 aa20.43■□□□□ 0.86
NFIX-213ENST00000591028 CNBD1Q8NA66 436 aa20.43■□□□□ 0.86
NFIX-213ENST00000591028 BRIP1Q9BX63 1249 aa20.43■□□□□ 0.86
NFIX-213ENST00000591028 ZNF652Q9Y2D9 606 aa20.43■□□□□ 0.86
NFIX-213ENST00000591028 ZC3H4Q9UPT8 1303 aaKnown RBP20.43■□□□□ 0.86
NFIX-213ENST00000591028 NPHP1O15259 732 aa20.42■□□□□ 0.86
NFIX-213ENST00000591028 C21orf2O43822 256 aa20.42■□□□□ 0.86
NFIX-213ENST00000591028 KRT24Q2M2I5 525 aa20.42■□□□□ 0.86
NFIX-213ENST00000591028 KIF6Q6ZMV9 814 aa20.42■□□□□ 0.86
NFIX-213ENST00000591028 ELL2O00472 640 aaPredicted RBP20.41■□□□□ 0.86
NFIX-213ENST00000591028 PDE6BP35913 854 aa20.41■□□□□ 0.86
NFIX-213ENST00000591028 CDCA7LQ96GN5 454 aa20.41■□□□□ 0.86
NFIX-213ENST00000591028 SETDB2Q96T68 719 aa20.41■□□□□ 0.86
NFIX-213ENST00000591028 VAMP4O75379 141 aa20.4■□□□□ 0.86
NFIX-213ENST00000591028 FSTL1Q12841 308 aa20.4■□□□□ 0.86
NFIX-213ENST00000591028 GLTPD2A6NH11 291 aa20.39■□□□□ 0.85
NFIX-213ENST00000591028 DDX58O95786 925 aaKnown RBP20.39■□□□□ 0.85
NFIX-213ENST00000591028 ST5P78524 1137 aa20.39■□□□□ 0.85
NFIX-213ENST00000591028 TSPYL6Q8N831 410 aa20.39■□□□□ 0.85
NFIX-213ENST00000591028 CHPF2Q9P2E5 772 aa20.39■□□□□ 0.85
NFIX-213ENST00000591028 NBPF26B4DH59 902 aa20.38■□□□□ 0.85
NFIX-213ENST00000591028 ERVV-1B6SEH8 477 aa20.38■□□□□ 0.85
NFIX-213ENST00000591028 MYL6BP14649 208 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms