RNA–Protein interactions for RNA: ENST00000590952.1

LINC01534-203, Transcript of long intergenic non-protein coding RNA 1534, humanhuman

TSL 4

Gene LINC01534, Length 550 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01534-203ENST00000590952 ZNF219Q9P2Y4 722 aaPredicted RBP21.36■■□□□ 1.01
LINC01534-203ENST00000590952 USP16Q9Y5T5 823 aa21.36■■□□□ 1.01
LINC01534-203ENST00000590952 MASTLQ96GX5 879 aa21.35■■□□□ 1.01
LINC01534-203ENST00000590952 TAOK3Q9H2K8 898 aa21.35■■□□□ 1.01
LINC01534-203ENST00000590952 COL13A1Q5TAT6 717 aaPredicted RBP21.34■■□□□ 1.01
LINC01534-203ENST00000590952 RTF1Q92541 710 aaKnown RBP21.34■■□□□ 1.01
LINC01534-203ENST00000590952 FER1L6Q2WGJ9 1857 aa21.34■■□□□ 1.01
LINC01534-203ENST00000590952 RGL2O15211 777 aa21.33■■□□□ 1.01
LINC01534-203ENST00000590952 SNRPA1P09661 255 aaKnown RBP21.33■■□□□ 1.01
LINC01534-203ENST00000590952 PRPF40BQ6NWY9 871 aaKnown RBP21.33■■□□□ 1.01
LINC01534-203ENST00000590952 ZNF652Q9Y2D9 606 aa21.33■■□□□ 1.01
LINC01534-203ENST00000590952 COL11A2P13942 1736 aaPredicted RBP21.32■■□□□ 1
LINC01534-203ENST00000590952 DICER1Q9UPY3 1922 aaKnown RBP21.32■■□□□ 1
LINC01534-203ENST00000590952 HTATSF1O43719 755 aaKnown RBP21.31■■□□□ 1
LINC01534-203ENST00000590952 NBPF5PQ86XG9 351 aaPredicted RBP21.31■■□□□ 1
LINC01534-203ENST00000590952 U2AF1L5P0DN76 240 aaPredicted RBP21.3■■□□□ 1
LINC01534-203ENST00000590952 U2AF1Q01081 240 aaKnown RBP eCLIP21.3■■□□□ 1
LINC01534-203ENST00000590952 TPTE2Q6XPS3 522 aa21.3■■□□□ 1
LINC01534-203ENST00000590952 BCORQ6W2J9 1755 aa21.29■■□□□ 1
LINC01534-203ENST00000590952 PRAMEF22A3QJZ6 481 aa21.29■■□□□ 1
LINC01534-203ENST00000590952 KLRG2A4D1S0 409 aaPredicted RBP21.29■■□□□ 1
LINC01534-203ENST00000590952 CHADLQ6NUI6 762 aa21.29■■□□□ 1
LINC01534-203ENST00000590952 MCM10Q7L590 875 aa21.29■■□□□ 1
LINC01534-203ENST00000590952 C7orf43Q8WVR3 580 aa21.29■■□□□ 1
LINC01534-203ENST00000590952 SLX4Q8IY92 1834 aa21.29■■□□□ 1
LINC01534-203ENST00000590952 DDNO94850 711 aaPredicted RBP21.28■■□□□ 1
LINC01534-203ENST00000590952 NPR1P16066 1061 aa21.28■■□□□ 1
LINC01534-203ENST00000590952 PIP4K2AP48426 406 aaPredicted RBP21.28■■□□□ 1
LINC01534-203ENST00000590952 PPP2R1AP30153 589 aa21.27■■□□□ 1
LINC01534-203ENST00000590952 ARFGEF2Q9Y6D5 1785 aa21.26■□□□□ 0.99
LINC01534-203ENST00000590952 IQCA1LA6NCM1 817 aa21.26■□□□□ 0.99
LINC01534-203ENST00000590952 CCDC93Q567U6 631 aa21.26■□□□□ 0.99
LINC01534-203ENST00000590952 CREBZFQ9NS37 354 aa21.26■□□□□ 0.99
LINC01534-203ENST00000590952 NBPF26B4DH59 902 aa21.25■□□□□ 0.99
LINC01534-203ENST00000590952 TAF7Q15545 349 aaPredicted RBP21.25■□□□□ 0.99
LINC01534-203ENST00000590952 NBPF10Q6P3W6 841 aaKnown RBP21.25■□□□□ 0.99
LINC01534-203ENST00000590952 TNS4Q8IZW8 715 aa21.25■□□□□ 0.99
LINC01534-203ENST00000590952 NBPF15Q8N660 670 aa21.25■□□□□ 0.99
LINC01534-203ENST00000590952 L3MBTL3Q96JM7 780 aaPredicted RBP21.25■□□□□ 0.99
LINC01534-203ENST00000590952 NIP7Q9Y221 180 aaKnown RBP eCLIP21.25■□□□□ 0.99
LINC01534-203ENST00000590952 HSPA1AP0DMV8 641 aaKnown RBP21.24■□□□□ 0.99
LINC01534-203ENST00000590952 HSPA1BP0DMV9 641 aaKnown RBP21.24■□□□□ 0.99
LINC01534-203ENST00000590952 FKBP4Q02790 459 aaKnown RBP eCLIP21.24■□□□□ 0.99
LINC01534-203ENST00000590952 ALDH1B1P30837 517 aa21.23■□□□□ 0.99
LINC01534-203ENST00000590952 DCTN1Q14203 1278 aa21.23■□□□□ 0.99
LINC01534-203ENST00000590952 RTKN2Q8IZC4 609 aa21.23■□□□□ 0.99
LINC01534-203ENST00000590952 POTEIP0CG38 1075 aa21.21■□□□□ 0.99
LINC01534-203ENST00000590952 POTEJP0CG39 1038 aa21.21■□□□□ 0.99
LINC01534-203ENST00000590952 LDHDQ86WU2 507 aa21.21■□□□□ 0.99
LINC01534-203ENST00000590952 CACNA1SQ13698 1873 aa21.21■□□□□ 0.99
LINC01534-203ENST00000590952 PNISRQ8TF01 805 aaKnown RBP21.2■□□□□ 0.98
LINC01534-203ENST00000590952 TAF1DQ9H5J8 278 aaPredicted RBP21.2■□□□□ 0.98
LINC01534-203ENST00000590952 GTF2E1P29083 439 aaPredicted RBP21.19■□□□□ 0.98
LINC01534-203ENST00000590952 HLFQ16534 295 aa21.19■□□□□ 0.98
LINC01534-203ENST00000590952 SCN4AP35499 1836 aa21.18■□□□□ 0.98
LINC01534-203ENST00000590952 FAM177BA6PVY3 158 aa21.18■□□□□ 0.98
LINC01534-203ENST00000590952 ERVV-1B6SEH8 477 aa21.18■□□□□ 0.98
LINC01534-203ENST00000590952 NEFMP07197 916 aa21.18■□□□□ 0.98
LINC01534-203ENST00000590952 NYXQ9GZU5 481 aa21.18■□□□□ 0.98
LINC01534-203ENST00000590952 ZNF277Q9NRM2 450 aaPredicted RBP21.18■□□□□ 0.98
LINC01534-203ENST00000590952 MIS18AQ9NYP9 233 aa21.18■□□□□ 0.98
LINC01534-203ENST00000590952 PASKQ96RG2 1323 aa21.18■□□□□ 0.98
LINC01534-203ENST00000590952 MKRN1Q9UHC7 482 aaKnown RBP21.17■□□□□ 0.98
LINC01534-203ENST00000590952 FZD9O00144 591 aa21.16■□□□□ 0.98
LINC01534-203ENST00000590952 CRY2Q49AN0 593 aa21.16■□□□□ 0.98
LINC01534-203ENST00000590952 SYNE4Q8N205 404 aa21.16■□□□□ 0.98
LINC01534-203ENST00000590952 HACL1Q9UJ83 578 aa21.16■□□□□ 0.98
LINC01534-203ENST00000590952 CAPN15O75808 1086 aa21.15■□□□□ 0.98
LINC01534-203ENST00000590952 IARSP41252 1262 aaKnown RBP21.15■□□□□ 0.98
LINC01534-203ENST00000590952 CC2D2BQ6DHV5 1058 aa21.15■□□□□ 0.98
LINC01534-203ENST00000590952 OLFM4Q6UX06 510 aa21.15■□□□□ 0.98
LINC01534-203ENST00000590952 PSMD1Q99460 953 aa21.15■□□□□ 0.98
LINC01534-203ENST00000590952 CNTNAP1P78357 1384 aa21.14■□□□□ 0.98
LINC01534-203ENST00000590952 ZNF541Q9H0D2 1346 aa21.14■□□□□ 0.97
LINC01534-203ENST00000590952 ITGBL1O95965 494 aaPredicted RBP21.14■□□□□ 0.97
LINC01534-203ENST00000590952 PNMA8AQ86V59 439 aaPredicted RBP21.14■□□□□ 0.97
LINC01534-203ENST00000590952 MAP3K15Q6ZN16 1313 aa21.13■□□□□ 0.97
LINC01534-203ENST00000590952 TMEM88BA6NKF7 163 aa21.13■□□□□ 0.97
LINC01534-203ENST00000590952 EPHX2P34913 555 aa21.13■□□□□ 0.97
LINC01534-203ENST00000590952 EIF4A1P60842 406 aaKnown RBP21.13■□□□□ 0.97
LINC01534-203ENST00000590952 GRIPAP1Q4V328 841 aa21.13■□□□□ 0.97
LINC01534-203ENST00000590952 EAPPQ56P03 285 aaPredicted RBP21.13■□□□□ 0.97
LINC01534-203ENST00000590952 GPC2Q8N158 579 aa21.13■□□□□ 0.97
LINC01534-203ENST00000590952 NGEFQ8N5V2 710 aa21.13■□□□□ 0.97
LINC01534-203ENST00000590952 HOXA10P31260 410 aaPredicted RBP21.12■□□□□ 0.97
LINC01534-203ENST00000590952 KIF6Q6ZMV9 814 aa21.12■□□□□ 0.97
LINC01534-203ENST00000590952 JDP2Q8WYK2 163 aa21.12■□□□□ 0.97
LINC01534-203ENST00000590952 CLEC11AQ9Y240 323 aa21.12■□□□□ 0.97
LINC01534-203ENST00000590952 RRP7AQ9Y3A4 280 aaKnown RBP21.12■□□□□ 0.97
LINC01534-203ENST00000590952 LAMB4A4D0S4 1761 aa21.11■□□□□ 0.97
LINC01534-203ENST00000590952 PLEKHF1Q96S99 279 aa21.11■□□□□ 0.97
LINC01534-203ENST00000590952 PNNQ9H307 717 aaKnown RBP21.11■□□□□ 0.97
LINC01534-203ENST00000590952 IBTKQ9P2D0 1353 aaPredicted RBP21.1■□□□□ 0.97
LINC01534-203ENST00000590952 NFE2L2Q16236 605 aa21.1■□□□□ 0.97
LINC01534-203ENST00000590952 NUTM1Q86Y26 1132 aa21.1■□□□□ 0.97
LINC01534-203ENST00000590952 RIC1Q4ADV7 1423 aa21.1■□□□□ 0.97
LINC01534-203ENST00000590952 SNED1Q8TER0 1413 aa21.1■□□□□ 0.97
LINC01534-203ENST00000590952 TTLL7Q6ZT98 887 aa21.09■□□□□ 0.97
LINC01534-203ENST00000590952 RPGRQ92834 1020 aaKnown RBP21.09■□□□□ 0.97
LINC01534-203ENST00000590952 ABCC12Q96J65 1359 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms