RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 FKBP4Q02790 459 aaKnown RBP eCLIP9.05□□□□□ -0.96
DNMT1-222ENST00000590619 OLFM4Q6UX06 510 aa9.05□□□□□ -0.96
DNMT1-222ENST00000590619 NBPF15Q8N660 670 aa9.05□□□□□ -0.96
DNMT1-222ENST00000590619 MASTLQ96GX5 879 aa9.05□□□□□ -0.96
DNMT1-222ENST00000590619 HHIPL1Q96JK4 782 aa9.05□□□□□ -0.96
DNMT1-222ENST00000590619 TESK2Q96S53 571 aa9.05□□□□□ -0.96
DNMT1-222ENST00000590619 AFDNP55196 1824 aaKnown RBP9.05□□□□□ -0.96
DNMT1-222ENST00000590619 ADAMTS7Q9UKP4 1686 aa9.04□□□□□ -0.96
DNMT1-222ENST00000590619 CCDC93Q567U6 631 aa9.04□□□□□ -0.96
DNMT1-222ENST00000590619 SYNE4Q8N205 404 aa9.04□□□□□ -0.96
DNMT1-222ENST00000590619 NRXN2Q9P2S2 1712 aa9.04□□□□□ -0.96
DNMT1-222ENST00000590619 LTBP1Q14766 1721 aa9.03□□□□□ -0.96
DNMT1-222ENST00000590619 DLL1O00548 723 aa9.03□□□□□ -0.96
DNMT1-222ENST00000590619 CELF2O95319 508 aaKnown RBP9.03□□□□□ -0.96
DNMT1-222ENST00000590619 CANXP27824 592 aaKnown RBP9.03□□□□□ -0.96
DNMT1-222ENST00000590619 IARSP41252 1262 aaKnown RBP9.03□□□□□ -0.96
DNMT1-222ENST00000590619 FXR1P51114 621 aaKnown RBP eCLIP9.03□□□□□ -0.96
DNMT1-222ENST00000590619 EIF5P55010 431 aaKnown RBP9.03□□□□□ -0.96
DNMT1-222ENST00000590619 NEUROD1Q13562 356 aa9.03□□□□□ -0.96
DNMT1-222ENST00000590619 EIF4A2Q14240 407 aaKnown RBP9.03□□□□□ -0.96
DNMT1-222ENST00000590619 ZNF530Q6P9A1 599 aaPredicted RBP9.03□□□□□ -0.96
DNMT1-222ENST00000590619 CARD14Q9BXL6 1004 aa9.03□□□□□ -0.96
DNMT1-222ENST00000590619 POLKQ9UBT6 870 aa9.03□□□□□ -0.96
DNMT1-222ENST00000590619 GJA3Q9Y6H8 435 aa9.03□□□□□ -0.96
DNMT1-222ENST00000590619 THSD7BQ9C0I4 1608 aa9.02□□□□□ -0.96
DNMT1-222ENST00000590619 COL15A1P39059 1388 aa9.02□□□□□ -0.97
DNMT1-222ENST00000590619 DLEC1Q9Y238 1755 aa9.02□□□□□ -0.97
DNMT1-222ENST00000590619 SCNN1DP51172 638 aa9.02□□□□□ -0.97
DNMT1-222ENST00000590619 SLC39A6Q13433 755 aa9.02□□□□□ -0.97
DNMT1-222ENST00000590619 AMOTQ4VCS5 1084 aa9.02□□□□□ -0.97
DNMT1-222ENST00000590619 USP50Q70EL3 339 aaPredicted RBP9.02□□□□□ -0.97
DNMT1-222ENST00000590619 RTKN2Q8IZC4 609 aa9.02□□□□□ -0.97
DNMT1-222ENST00000590619 HPS5Q9UPZ3 1129 aa9.02□□□□□ -0.97
DNMT1-222ENST00000590619 SLX4Q8IY92 1834 aa9.02□□□□□ -0.97
DNMT1-222ENST00000590619 LMOD1P29536 600 aaPredicted RBP9.01□□□□□ -0.97
DNMT1-222ENST00000590619 NOGQ13253 232 aa9.01□□□□□ -0.97
DNMT1-222ENST00000590619 CTU1Q7Z7A3 348 aaKnown RBP9.01□□□□□ -0.97
DNMT1-222ENST00000590619 LGR6Q9HBX8 967 aa9.01□□□□□ -0.97
DNMT1-222ENST00000590619 RNF186Q9NXI6 227 aa9.01□□□□□ -0.97
DNMT1-222ENST00000590619 TBC1D2BQ9UPU7 963 aa9.01□□□□□ -0.97
DNMT1-222ENST00000590619 A0A087WZG4 1122 aa9□□□□□ -0.97
DNMT1-222ENST00000590619 TRPA1O75762 1119 aa9□□□□□ -0.97
DNMT1-222ENST00000590619 EIF6P56537 245 aaKnown RBP9□□□□□ -0.97
DNMT1-222ENST00000590619 C1orf141Q5JVX7 400 aa9□□□□□ -0.97
DNMT1-222ENST00000590619 JDP2Q8WYK2 163 aa9□□□□□ -0.97
DNMT1-222ENST00000590619 SETDB2Q96T68 719 aa9□□□□□ -0.97
DNMT1-222ENST00000590619 GLIS2Q9BZE0 524 aaPredicted RBP9□□□□□ -0.97
DNMT1-222ENST00000590619 PGAP2Q9UHJ9 254 aa9□□□□□ -0.97
DNMT1-222ENST00000590619 KLRG2A4D1S0 409 aaPredicted RBP8.99□□□□□ -0.97
DNMT1-222ENST00000590619 FAM155AB1AL88 458 aaPredicted RBP8.99□□□□□ -0.97
DNMT1-222ENST00000590619 NPR1P16066 1061 aa8.99□□□□□ -0.97
DNMT1-222ENST00000590619 KIF23Q02241 960 aaPredicted RBP8.99□□□□□ -0.97
DNMT1-222ENST00000590619 CNBD1Q8NA66 436 aa8.99□□□□□ -0.97
DNMT1-222ENST00000590619 ZNF408Q9H9D4 720 aa8.99□□□□□ -0.97
DNMT1-222ENST00000590619 SLC52A2Q9HAB3 445 aa8.99□□□□□ -0.97
DNMT1-222ENST00000590619 SAGE1Q9NXZ1 904 aa8.99□□□□□ -0.97
DNMT1-222ENST00000590619 SLC24A1O60721 1099 aa8.98□□□□□ -0.97
DNMT1-222ENST00000590619 ST5P78524 1137 aa8.98□□□□□ -0.97
DNMT1-222ENST00000590619 AKAP4Q5JQC9 854 aa8.98□□□□□ -0.97
DNMT1-222ENST00000590619 DLK2Q6UY11 383 aa8.98□□□□□ -0.97
DNMT1-222ENST00000590619 VSIG10Q8N0Z9 540 aa8.98□□□□□ -0.97
DNMT1-222ENST00000590619 ANKRD31Q8N7Z5 1873 aa8.98□□□□□ -0.97
DNMT1-222ENST00000590619 NPHP1O15259 732 aa8.97□□□□□ -0.97
DNMT1-222ENST00000590619 HIRAP54198 1017 aaPredicted RBP8.97□□□□□ -0.97
DNMT1-222ENST00000590619 HUNKP57058 714 aa8.97□□□□□ -0.97
DNMT1-222ENST00000590619 AEBP1Q8IUX7 1158 aa8.97□□□□□ -0.97
DNMT1-222ENST00000590619 CSRNP1Q96S65 589 aa8.97□□□□□ -0.97
DNMT1-222ENST00000590619 PSMD1Q99460 953 aa8.97□□□□□ -0.97
DNMT1-222ENST00000590619 ADARB2Q9NS39 739 aaKnown RBP8.97□□□□□ -0.97
DNMT1-222ENST00000590619 GPRC5DQ9NZD1 345 aa8.97□□□□□ -0.97
DNMT1-222ENST00000590619 TJP1Q07157 1748 aa8.97□□□□□ -0.97
DNMT1-222ENST00000590619 STARD3NLO95772 234 aa8.96□□□□□ -0.98
DNMT1-222ENST00000590619 PKN2Q16513 984 aaKnown RBP8.96□□□□□ -0.98
DNMT1-222ENST00000590619 RGMBQ6NW40 437 aa8.96□□□□□ -0.98
DNMT1-222ENST00000590619 CDC37L1Q7L3B6 337 aa8.96□□□□□ -0.98
DNMT1-222ENST00000590619 RNMTO43148 476 aaKnown RBP8.95□□□□□ -0.98
DNMT1-222ENST00000590619 CAMTA2O94983 1202 aa8.95□□□□□ -0.98
DNMT1-222ENST00000590619 ALDH1B1P30837 517 aa8.95□□□□□ -0.98
DNMT1-222ENST00000590619 USP48Q86UV5 1035 aa8.95□□□□□ -0.98
DNMT1-222ENST00000590619 SLC17A8Q8NDX2 589 aa8.95□□□□□ -0.98
DNMT1-222ENST00000590619 CCDC102AQ96A19 550 aa8.95□□□□□ -0.98
DNMT1-222ENST00000590619 ZNF330Q9Y3S2 320 aaPredicted RBP8.95□□□□□ -0.98
DNMT1-222ENST00000590619 CACNA1SQ13698 1873 aa8.94□□□□□ -0.98
DNMT1-222ENST00000590619 A1BGP04217 495 aa8.94□□□□□ -0.98
DNMT1-222ENST00000590619 IL6STP40189 918 aaPredicted RBP8.94□□□□□ -0.98
DNMT1-222ENST00000590619 TNNT2P45379 298 aaPredicted RBP8.94□□□□□ -0.98
DNMT1-222ENST00000590619 NBPF5PQ86XG9 351 aaPredicted RBP8.94□□□□□ -0.98
DNMT1-222ENST00000590619 LARGE2Q8N3Y3 721 aa8.94□□□□□ -0.98
DNMT1-222ENST00000590619 ZC3H15Q8WU90 426 aaKnown RBP8.94□□□□□ -0.98
DNMT1-222ENST00000590619 COLQQ9Y215 455 aaPredicted RBP8.94□□□□□ -0.98
DNMT1-222ENST00000590619 COL11A2P13942 1736 aaPredicted RBP8.94□□□□□ -0.98
DNMT1-222ENST00000590619 TRPM7Q96QT4 1865 aa8.94□□□□□ -0.98
DNMT1-222ENST00000590619 ZNF157P51786 506 aaPredicted RBP8.93□□□□□ -0.98
DNMT1-222ENST00000590619 CXCL9Q07325 125 aa8.93□□□□□ -0.98
DNMT1-222ENST00000590619 SULT6B1Q6IMI4 303 aa8.93□□□□□ -0.98
DNMT1-222ENST00000590619 TPTE2Q6XPS3 522 aa8.93□□□□□ -0.98
DNMT1-222ENST00000590619 COL4A5P29400 1685 aa8.93□□□□□ -0.98
DNMT1-222ENST00000590619 SNED1Q8TER0 1413 aa8.92□□□□□ -0.98
DNMT1-222ENST00000590619 CC2D2BQ6DHV5 1058 aa8.92□□□□□ -0.98
DNMT1-222ENST00000590619 ZNF296Q8WUU4 475 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms