RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 PNMA6EA0A0J9YXQ4 647 aa20.13■□□□□ 0.81
SMARCA4-215ENST00000590574 LMBRD1Q9NUN5 540 aa20.13■□□□□ 0.81
SMARCA4-215ENST00000590574 A0A087WZG4 1122 aa20.12■□□□□ 0.81
SMARCA4-215ENST00000590574 IMMTQ16891 758 aaKnown RBP20.12■□□□□ 0.81
SMARCA4-215ENST00000590574 HS1BP3Q53T59 392 aa20.12■□□□□ 0.81
SMARCA4-215ENST00000590574 CLIP2Q9UDT6 1046 aa20.12■□□□□ 0.81
SMARCA4-215ENST00000590574 PDCL2Q8N4E4 241 aa20.12■□□□□ 0.81
SMARCA4-215ENST00000590574 HOXC9P31274 260 aa20.12■□□□□ 0.81
SMARCA4-215ENST00000590574 CCT2P78371 535 aaKnown RBP20.12■□□□□ 0.81
SMARCA4-215ENST00000590574 ANKRD24Q8TF21 1146 aa20.12■□□□□ 0.81
SMARCA4-215ENST00000590574 IFIT1P09914 478 aaKnown RBP20.11■□□□□ 0.81
SMARCA4-215ENST00000590574 GPS2Q13227 327 aa20.11■□□□□ 0.81
SMARCA4-215ENST00000590574 TEX35Q5T0J7 233 aa20.11■□□□□ 0.81
SMARCA4-215ENST00000590574 STK11IPQ8N1F8 1099 aa20.11■□□□□ 0.81
SMARCA4-215ENST00000590574 NEK1Q96PY6 1258 aa20.11■□□□□ 0.81
SMARCA4-215ENST00000590574 CD2BP2O95400 341 aaKnown RBP20.11■□□□□ 0.81
SMARCA4-215ENST00000590574 HMGB1P09429 215 aaKnown RBP20.11■□□□□ 0.81
SMARCA4-215ENST00000590574 TTC41PQ6P2S7 1318 aa20.11■□□□□ 0.81
SMARCA4-215ENST00000590574 A0A0U1RQG5 324 aaPredicted RBP20.11■□□□□ 0.81
SMARCA4-215ENST00000590574 ZNF445P59923 1031 aa20.11■□□□□ 0.81
SMARCA4-215ENST00000590574 EFCAB6Q5THR3 1501 aa20.11■□□□□ 0.81
SMARCA4-215ENST00000590574 OFD1O75665 1012 aa20.11■□□□□ 0.81
SMARCA4-215ENST00000590574 XBP1P17861 261 aa20.11■□□□□ 0.81
SMARCA4-215ENST00000590574 TNNT3P45378 269 aaPredicted RBP20.11■□□□□ 0.81
SMARCA4-215ENST00000590574 KSR2Q6VAB6 950 aa20.11■□□□□ 0.81
SMARCA4-215ENST00000590574 HMG20BQ9P0W2 317 aa20.11■□□□□ 0.81
SMARCA4-215ENST00000590574 E9PCH4 1651 aa20.1■□□□□ 0.81
SMARCA4-215ENST00000590574 CCP110O43303 1012 aa20.1■□□□□ 0.81
SMARCA4-215ENST00000590574 ALDH1L1O75891 902 aa20.1■□□□□ 0.81
SMARCA4-215ENST00000590574 RTL1A6NKG5 1358 aa20.1■□□□□ 0.81
SMARCA4-215ENST00000590574 ATP5J2-PTCD1G3V325 749 aa20.1■□□□□ 0.81
SMARCA4-215ENST00000590574 PTCD1O75127 700 aaKnown RBP20.1■□□□□ 0.81
SMARCA4-215ENST00000590574 BRPF1P55201 1214 aaPredicted RBP20.1■□□□□ 0.81
SMARCA4-215ENST00000590574 NMIQ13287 307 aaPredicted RBP20.1■□□□□ 0.81
SMARCA4-215ENST00000590574 KIAA0232Q92628 1395 aa20.1■□□□□ 0.81
SMARCA4-215ENST00000590574 PCMTD1Q96MG8 357 aaPredicted RBP20.1■□□□□ 0.81
SMARCA4-215ENST00000590574 CPA1P15085 419 aa20.1■□□□□ 0.81
SMARCA4-215ENST00000590574 AKAP4Q5JQC9 854 aa20.1■□□□□ 0.81
SMARCA4-215ENST00000590574 UBE3BQ7Z3V4 1068 aa20.1■□□□□ 0.81
SMARCA4-215ENST00000590574 GRM8O00222 908 aa20.09■□□□□ 0.81
SMARCA4-215ENST00000590574 DYNC1I1O14576 645 aa20.09■□□□□ 0.81
SMARCA4-215ENST00000590574 ZSCAN25Q6NSZ9 544 aa20.09■□□□□ 0.81
SMARCA4-215ENST00000590574 LRRC59Q96AG4 307 aaKnown RBP20.09■□□□□ 0.81
SMARCA4-215ENST00000590574 MARCH6O60337 910 aa20.09■□□□□ 0.81
SMARCA4-215ENST00000590574 CWF19L2Q2TBE0 894 aaKnown RBP20.09■□□□□ 0.81
SMARCA4-215ENST00000590574 BRMS1Q9HCU9 246 aa20.09■□□□□ 0.81
SMARCA4-215ENST00000590574 ANO10Q9NW15 660 aa20.09■□□□□ 0.81
SMARCA4-215ENST00000590574 GOLIM4O00461 696 aa20.09■□□□□ 0.81
SMARCA4-215ENST00000590574 SBNO1A3KN83 1393 aa20.08■□□□□ 0.81
SMARCA4-215ENST00000590574 FSD2A1L4K1 749 aa20.08■□□□□ 0.81
SMARCA4-215ENST00000590574 PPFIA3O75145 1194 aa20.08■□□□□ 0.81
SMARCA4-215ENST00000590574 CCDC69A6NI79 296 aa20.08■□□□□ 0.81
SMARCA4-215ENST00000590574 PKP1Q13835 747 aa20.08■□□□□ 0.8
SMARCA4-215ENST00000590574 NOLC1Q14978 699 aaKnown RBP eCLIP20.08■□□□□ 0.8
SMARCA4-215ENST00000590574 GAS2L3Q86XJ1 694 aa20.08■□□□□ 0.8
SMARCA4-215ENST00000590574 C16orf45Q96MC5 204 aaPredicted RBP20.08■□□□□ 0.8
SMARCA4-215ENST00000590574 PHF23Q9BUL5 403 aaPredicted RBP20.08■□□□□ 0.8
SMARCA4-215ENST00000590574 CDKL5O76039 1030 aa20.07■□□□□ 0.8
SMARCA4-215ENST00000590574 YEATS2Q9ULM3 1422 aa20.07■□□□□ 0.8
SMARCA4-215ENST00000590574 SYT1P21579 422 aa20.07■□□□□ 0.8
SMARCA4-215ENST00000590574 TTC12Q9H892 705 aaPredicted RBP20.07■□□□□ 0.8
SMARCA4-215ENST00000590574 ZNF165P49910 485 aa20.07■□□□□ 0.8
SMARCA4-215ENST00000590574 CFAP74Q9C0B2 1584 aa20.07■□□□□ 0.8
SMARCA4-215ENST00000590574 ABCA6Q8N139 1617 aa20.07■□□□□ 0.8
SMARCA4-215ENST00000590574 NEO1Q92859 1461 aa20.06■□□□□ 0.8
SMARCA4-215ENST00000590574 UBE2Q2Q8WVN8 375 aa20.06■□□□□ 0.8
SMARCA4-215ENST00000590574 PRDM11Q9NQV5 511 aa20.06■□□□□ 0.8
SMARCA4-215ENST00000590574 FAM135BQ49AJ0 1406 aa20.06■□□□□ 0.8
SMARCA4-215ENST00000590574 IDH1O75874 414 aaKnown RBP20.06■□□□□ 0.8
SMARCA4-215ENST00000590574 VPS53Q5VIR6 699 aa20.06■□□□□ 0.8
SMARCA4-215ENST00000590574 DDX46Q7L014 1031 aaKnown RBP20.06■□□□□ 0.8
SMARCA4-215ENST00000590574 AMOTL1Q8IY63 956 aa20.06■□□□□ 0.8
SMARCA4-215ENST00000590574 IPO7O95373 1038 aaKnown RBP20.06■□□□□ 0.8
SMARCA4-215ENST00000590574 CREB3L3Q68CJ9 461 aa20.06■□□□□ 0.8
SMARCA4-215ENST00000590574 SIRT2Q8IXJ6 389 aa20.06■□□□□ 0.8
SMARCA4-215ENST00000590574 TRIM22Q8IYM9 498 aa20.06■□□□□ 0.8
SMARCA4-215ENST00000590574 C8orf76Q96K31 380 aa20.06■□□□□ 0.8
SMARCA4-215ENST00000590574 CTAGE5O15320 804 aa20.05■□□□□ 0.8
SMARCA4-215ENST00000590574 SLC39A6Q13433 755 aa20.05■□□□□ 0.8
SMARCA4-215ENST00000590574 DHX8Q14562 1220 aaKnown RBP20.05■□□□□ 0.8
SMARCA4-215ENST00000590574 CCAR1Q8IX12 1150 aaKnown RBP20.05■□□□□ 0.8
SMARCA4-215ENST00000590574 FSIP1Q8NA03 581 aa20.05■□□□□ 0.8
SMARCA4-215ENST00000590574 LRRC2Q9BYS8 371 aa20.05■□□□□ 0.8
SMARCA4-215ENST00000590574 PRDM10Q9NQV6 1147 aa20.05■□□□□ 0.8
SMARCA4-215ENST00000590574 NOL7Q9UMY1 257 aaKnown RBP20.05■□□□□ 0.8
SMARCA4-215ENST00000590574 CBX1P83916 185 aa20.05■□□□□ 0.8
SMARCA4-215ENST00000590574 XAGE3Q8WTP9 111 aa20.05■□□□□ 0.8
SMARCA4-215ENST00000590574 BRF1Q92994 677 aa20.05■□□□□ 0.8
SMARCA4-215ENST00000590574 SNX14Q9Y5W7 946 aa20.05■□□□□ 0.8
SMARCA4-215ENST00000590574 SMTNL1A8MU46 457 aa20.05■□□□□ 0.8
SMARCA4-215ENST00000590574 TNNT1P13805 278 aa20.05■□□□□ 0.8
SMARCA4-215ENST00000590574 PTPN14Q15678 1187 aa20.05■□□□□ 0.8
SMARCA4-215ENST00000590574 RUFY3Q7L099 469 aa20.05■□□□□ 0.8
SMARCA4-215ENST00000590574 ANO6Q4KMQ2 910 aa20.04■□□□□ 0.8
SMARCA4-215ENST00000590574 ANKRD13DQ6ZTN6 518 aa20.04■□□□□ 0.8
SMARCA4-215ENST00000590574 AKAP2Q9Y2D5 859 aa20.04■□□□□ 0.8
SMARCA4-215ENST00000590574 CBFA2T2O43439 604 aa20.04■□□□□ 0.8
SMARCA4-215ENST00000590574 PRIMPOLQ96LW4 560 aa20.04■□□□□ 0.8
SMARCA4-215ENST00000590574 MLH3Q9UHC1 1453 aa20.04■□□□□ 0.8
SMARCA4-215ENST00000590574 TTLL5Q6EMB2 1281 aa20.04■□□□□ 0.8
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