RNA–Protein interactions for RNA: ENST00000590035.5

RETREG3-209, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 518 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-209ENST00000590035 KDM2BQ8NHM5 1336 aa13.92□□□□□ -0.18
RETREG3-209ENST00000590035 NBPF26B4DH59 902 aa13.92□□□□□ -0.18
RETREG3-209ENST00000590035 H0YIN7 160 aa13.92□□□□□ -0.18
RETREG3-209ENST00000590035 NBPF10Q6P3W6 841 aaKnown RBP13.92□□□□□ -0.18
RETREG3-209ENST00000590035 BICDL1Q6ZP65 573 aa13.92□□□□□ -0.18
RETREG3-209ENST00000590035 NBPF15Q8N660 670 aa13.92□□□□□ -0.18
RETREG3-209ENST00000590035 KLRG2A4D1S0 409 aaPredicted RBP13.91□□□□□ -0.18
RETREG3-209ENST00000590035 SNRPA1P09661 255 aaKnown RBP13.91□□□□□ -0.18
RETREG3-209ENST00000590035 FSTL1Q12841 308 aa13.91□□□□□ -0.18
RETREG3-209ENST00000590035 CLEC4GQ6UXB4 293 aa13.91□□□□□ -0.18
RETREG3-209ENST00000590035 PLEKHF1Q96S99 279 aa13.91□□□□□ -0.18
RETREG3-209ENST00000590035 SLX4Q8IY92 1834 aa13.91□□□□□ -0.18
RETREG3-209ENST00000590035 LTBP3Q9NS15 1303 aa13.9□□□□□ -0.18
RETREG3-209ENST00000590035 GLTPD2A6NH11 291 aa13.9□□□□□ -0.18
RETREG3-209ENST00000590035 SRGNP10124 158 aa13.9□□□□□ -0.18
RETREG3-209ENST00000590035 PDE6BP35913 854 aa13.9□□□□□ -0.18
RETREG3-209ENST00000590035 CACNB1Q02641 598 aaPredicted RBP13.9□□□□□ -0.18
RETREG3-209ENST00000590035 DCTN1Q14203 1278 aa13.9□□□□□ -0.18
RETREG3-209ENST00000590035 DZIP3Q86Y13 1208 aaKnown RBP13.9□□□□□ -0.18
RETREG3-209ENST00000590035 POTECB2RU33 542 aa13.89□□□□□ -0.19
RETREG3-209ENST00000590035 PIP4K2AP48426 406 aaPredicted RBP13.89□□□□□ -0.19
RETREG3-209ENST00000590035 STYK1Q6J9G0 422 aa13.89□□□□□ -0.19
RETREG3-209ENST00000590035 C7orf43Q8WVR3 580 aa13.89□□□□□ -0.19
RETREG3-209ENST00000590035 SETDB2Q96T68 719 aa13.89□□□□□ -0.19
RETREG3-209ENST00000590035 RRAGCQ9HB90 399 aa13.89□□□□□ -0.19
RETREG3-209ENST00000590035 IFFO2Q5TF58 517 aa13.88□□□□□ -0.19
RETREG3-209ENST00000590035 CCDC24Q8N4L8 307 aa13.88□□□□□ -0.19
RETREG3-209ENST00000590035 CNBD1Q8NA66 436 aa13.88□□□□□ -0.19
RETREG3-209ENST00000590035 TAF7Q15545 349 aaPredicted RBP13.87□□□□□ -0.19
RETREG3-209ENST00000590035 RTF1Q92541 710 aaKnown RBP13.87□□□□□ -0.19
RETREG3-209ENST00000590035 ZNF330Q9Y3S2 320 aaPredicted RBP13.87□□□□□ -0.19
RETREG3-209ENST00000590035 SNED1Q8TER0 1413 aa13.87□□□□□ -0.19
RETREG3-209ENST00000590035 C21orf2O43822 256 aa13.86□□□□□ -0.19
RETREG3-209ENST00000590035 JMYQ8N9B5 988 aa13.86□□□□□ -0.19
RETREG3-209ENST00000590035 MASTLQ96GX5 879 aa13.86□□□□□ -0.19
RETREG3-209ENST00000590035 CACNA1SQ13698 1873 aa13.86□□□□□ -0.19
RETREG3-209ENST00000590035 VEGFAP15692 232 aaPredicted RBP13.85□□□□□ -0.19
RETREG3-209ENST00000590035 PRPF40BQ6NWY9 871 aaKnown RBP13.85□□□□□ -0.19
RETREG3-209ENST00000590035 CNKSR1Q969H4 720 aa13.85□□□□□ -0.19
RETREG3-209ENST00000590035 ZNF622Q969S3 477 aaKnown RBP eCLIP13.85□□□□□ -0.19
RETREG3-209ENST00000590035 RIC1Q4ADV7 1423 aa13.84□□□□□ -0.19
RETREG3-209ENST00000590035 EIF4A1P60842 406 aaKnown RBP13.84□□□□□ -0.19
RETREG3-209ENST00000590035 ST5P78524 1137 aa13.84□□□□□ -0.19
RETREG3-209ENST00000590035 HTRA3P83110 453 aa13.84□□□□□ -0.19
RETREG3-209ENST00000590035 HLFQ16534 295 aa13.84□□□□□ -0.19
RETREG3-209ENST00000590035 SMC1BQ8NDV3 1235 aa13.84□□□□□ -0.19
RETREG3-209ENST00000590035 KLRG1Q96E93 195 aa13.84□□□□□ -0.19
RETREG3-209ENST00000590035 NUP98P52948 1817 aa13.84□□□□□ -0.19
RETREG3-209ENST00000590035 NFE2L2Q16236 605 aa13.83□□□□□ -0.2
RETREG3-209ENST00000590035 LRP10Q7Z4F1 713 aa13.83□□□□□ -0.2
RETREG3-209ENST00000590035 NBPF5PQ86XG9 351 aaPredicted RBP13.83□□□□□ -0.2
RETREG3-209ENST00000590035 C16orf71Q8IYS4 520 aaPredicted RBP13.83□□□□□ -0.2
RETREG3-209ENST00000590035 PNISRQ8TF01 805 aaKnown RBP13.83□□□□□ -0.2
RETREG3-209ENST00000590035 TAOK3Q9H2K8 898 aa13.83□□□□□ -0.2
RETREG3-209ENST00000590035 MIS18AQ9NYP9 233 aa13.83□□□□□ -0.2
RETREG3-209ENST00000590035 ZNF652Q9Y2D9 606 aa13.83□□□□□ -0.2
RETREG3-209ENST00000590035 ERVV-1B6SEH8 477 aa13.82□□□□□ -0.2
RETREG3-209ENST00000590035 NPR1P16066 1061 aa13.82□□□□□ -0.2
RETREG3-209ENST00000590035 CRY2Q49AN0 593 aa13.82□□□□□ -0.2
RETREG3-209ENST00000590035 SOGA3Q5TF21 947 aa13.82□□□□□ -0.2
RETREG3-209ENST00000590035 SAMD1Q6SPF0 538 aaPredicted RBP13.82□□□□□ -0.2
RETREG3-209ENST00000590035 NPM2Q86SE8 214 aaKnown RBP13.82□□□□□ -0.2
RETREG3-209ENST00000590035 IBTKQ9P2D0 1353 aaPredicted RBP13.82□□□□□ -0.2
RETREG3-209ENST00000590035 ERFEQ4G0M1 354 aa13.81□□□□□ -0.2
RETREG3-209ENST00000590035 THUMPD2Q9BTF0 503 aaKnown RBP13.81□□□□□ -0.2
RETREG3-209ENST00000590035 NIP7Q9Y221 180 aaKnown RBP eCLIP13.81□□□□□ -0.2
RETREG3-209ENST00000590035 ABCC12Q96J65 1359 aa13.81□□□□□ -0.2
RETREG3-209ENST00000590035 TPTE2Q6XPS3 522 aa13.8□□□□□ -0.2
RETREG3-209ENST00000590035 L3MBTL3Q96JM7 780 aaPredicted RBP13.8□□□□□ -0.2
RETREG3-209ENST00000590035 ERBB4Q15303 1308 aa13.8□□□□□ -0.2
RETREG3-209ENST00000590035 MAP3K15Q6ZN16 1313 aa13.8□□□□□ -0.2
RETREG3-209ENST00000590035 ADAMTSL1Q8N6G6 1762 aa13.8□□□□□ -0.2
RETREG3-209ENST00000590035 SCN4AP35499 1836 aa13.79□□□□□ -0.2
RETREG3-209ENST00000590035 TTLL7Q6ZT98 887 aa13.79□□□□□ -0.2
RETREG3-209ENST00000590035 ZNF219Q9P2Y4 722 aaPredicted RBP13.79□□□□□ -0.2
RETREG3-209ENST00000590035 FKBP4Q02790 459 aaKnown RBP eCLIP13.78□□□□□ -0.2
RETREG3-209ENST00000590035 PDIA6Q15084 440 aa13.78□□□□□ -0.2
RETREG3-209ENST00000590035 CCDC93Q567U6 631 aa13.78□□□□□ -0.2
RETREG3-209ENST00000590035 DPY19L2Q6NUT2 758 aa13.78□□□□□ -0.2
RETREG3-209ENST00000590035 ZNF34Q8IZ26 560 aa13.78□□□□□ -0.2
RETREG3-209ENST00000590035 UBN2Q6ZU65 1347 aa13.78□□□□□ -0.2
RETREG3-209ENST00000590035 DDNO94850 711 aaPredicted RBP13.77□□□□□ -0.21
RETREG3-209ENST00000590035 COL4A5P29400 1685 aa13.77□□□□□ -0.21
RETREG3-209ENST00000590035 HOXA10P31260 410 aaPredicted RBP13.77□□□□□ -0.21
RETREG3-209ENST00000590035 OLFM4Q6UX06 510 aa13.77□□□□□ -0.21
RETREG3-209ENST00000590035 BABAM1Q9NWV8 329 aa13.77□□□□□ -0.21
RETREG3-209ENST00000590035 RALBP1Q15311 655 aa13.76□□□□□ -0.21
RETREG3-209ENST00000590035 ZNF541Q9H0D2 1346 aa13.75□□□□□ -0.21
RETREG3-209ENST00000590035 NPHP1O15259 732 aa13.75□□□□□ -0.21
RETREG3-209ENST00000590035 NTSR2O95665 410 aa13.75□□□□□ -0.21
RETREG3-209ENST00000590035 POTEIP0CG38 1075 aa13.75□□□□□ -0.21
RETREG3-209ENST00000590035 POTEJP0CG39 1038 aa13.75□□□□□ -0.21
RETREG3-209ENST00000590035 ALDH1B1P30837 517 aa13.75□□□□□ -0.21
RETREG3-209ENST00000590035 GIGYF2Q6Y7W6 1299 aaKnown RBP13.75□□□□□ -0.21
RETREG3-209ENST00000590035 RTKN2Q8IZC4 609 aa13.75□□□□□ -0.21
RETREG3-209ENST00000590035 PSMD1Q99460 953 aa13.75□□□□□ -0.21
RETREG3-209ENST00000590035 NYXQ9GZU5 481 aa13.75□□□□□ -0.21
RETREG3-209ENST00000590035 PNNQ9H307 717 aaKnown RBP13.75□□□□□ -0.21
RETREG3-209ENST00000590035 PASKQ96RG2 1323 aa13.74□□□□□ -0.21
RETREG3-209ENST00000590035 MAPK8IP3Q9UPT6 1336 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms