RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 CCDC87Q9NVE4 849 aa21.92■■□□□ 1.1
CXXC1-212ENST00000589940 IL6STP40189 918 aaPredicted RBP21.92■■□□□ 1.1
CXXC1-212ENST00000589940 CRKLP46109 303 aaKnown RBP21.92■■□□□ 1.1
CXXC1-212ENST00000589940 ZNF330Q9Y3S2 320 aaPredicted RBP21.92■■□□□ 1.1
CXXC1-212ENST00000589940 INTS5Q6P9B9 1019 aaKnown RBP21.91■■□□□ 1.1
CXXC1-212ENST00000589940 IBTKQ9P2D0 1353 aaPredicted RBP21.91■■□□□ 1.1
CXXC1-212ENST00000589940 ARFGEF2Q9Y6D5 1785 aa21.91■■□□□ 1.1
CXXC1-212ENST00000589940 RREB1Q92766 1687 aa21.9■■□□□ 1.1
CXXC1-212ENST00000589940 COL5A3P25940 1745 aaPredicted RBP21.9■■□□□ 1.1
CXXC1-212ENST00000589940 GNAI2P04899 355 aa21.9■■□□□ 1.1
CXXC1-212ENST00000589940 IGKV5-2P06315 115 aa21.9■■□□□ 1.1
CXXC1-212ENST00000589940 CWF19L2Q2TBE0 894 aaKnown RBP21.9■■□□□ 1.1
CXXC1-212ENST00000589940 MYD88Q99836 296 aa21.9■■□□□ 1.1
CXXC1-212ENST00000589940 KIF6Q6ZMV9 814 aa21.89■■□□□ 1.09
CXXC1-212ENST00000589940 LY75O60449 1722 aa21.88■■□□□ 1.09
CXXC1-212ENST00000589940 NUP188Q5SRE5 1749 aa21.88■■□□□ 1.09
CXXC1-212ENST00000589940 UBTFL1P0CB47 393 aaPredicted RBP21.88■■□□□ 1.09
CXXC1-212ENST00000589940 LINC00116Q8NCU8 138 aa21.88■■□□□ 1.09
CXXC1-212ENST00000589940 ZBTB3Q9H5J0 574 aa21.88■■□□□ 1.09
CXXC1-212ENST00000589940 NEURL1BA8MQ27 555 aa21.88■■□□□ 1.09
CXXC1-212ENST00000589940 TRIM37O94972 964 aa21.88■■□□□ 1.09
CXXC1-212ENST00000589940 NPM2Q86SE8 214 aaKnown RBP21.88■■□□□ 1.09
CXXC1-212ENST00000589940 CCNL1Q9UK58 526 aaPredicted RBP21.88■■□□□ 1.09
CXXC1-212ENST00000589940 EIF5P55010 431 aaKnown RBP21.87■■□□□ 1.09
CXXC1-212ENST00000589940 RPAP2Q8IXW5 612 aaPredicted RBP21.87■■□□□ 1.09
CXXC1-212ENST00000589940 CEP85Q6P2H3 762 aa21.87■■□□□ 1.09
CXXC1-212ENST00000589940 SIRT2Q8IXJ6 389 aa21.87■■□□□ 1.09
CXXC1-212ENST00000589940 CNTNAP4Q9C0A0 1308 aa21.86■■□□□ 1.09
CXXC1-212ENST00000589940 NBPF7P0C2Y1 421 aaPredicted RBP21.86■■□□□ 1.09
CXXC1-212ENST00000589940 KCNQ4P56696 695 aa21.86■■□□□ 1.09
CXXC1-212ENST00000589940 ANKRD44Q8N8A2 993 aa21.86■■□□□ 1.09
CXXC1-212ENST00000589940 C9orf78Q9NZ63 289 aaPredicted RBP21.86■■□□□ 1.09
CXXC1-212ENST00000589940 MAP3K15Q6ZN16 1313 aa21.86■■□□□ 1.09
CXXC1-212ENST00000589940 MYH14Q7Z406 1995 aaKnown RBP21.85■■□□□ 1.09
CXXC1-212ENST00000589940 GRM8O00222 908 aa21.84■■□□□ 1.09
CXXC1-212ENST00000589940 GCKRQ14397 625 aa21.84■■□□□ 1.09
CXXC1-212ENST00000589940 LRRFIP2Q9Y608 721 aaKnown RBP21.84■■□□□ 1.09
CXXC1-212ENST00000589940 UTYO14607 1347 aa21.84■■□□□ 1.09
CXXC1-212ENST00000589940 ARXQ96QS3 562 aa21.84■■□□□ 1.09
CXXC1-212ENST00000589940 ATP5J2-PTCD1G3V325 749 aa21.83■■□□□ 1.09
CXXC1-212ENST00000589940 RC3H1Q5TC82 1133 aaKnown RBP21.83■■□□□ 1.09
CXXC1-212ENST00000589940 DZIP3Q86Y13 1208 aaKnown RBP21.83■■□□□ 1.09
CXXC1-212ENST00000589940 HDAC5Q9UQL6 1122 aa21.83■■□□□ 1.08
CXXC1-212ENST00000589940 ERVV-1B6SEH8 477 aa21.82■■□□□ 1.08
CXXC1-212ENST00000589940 TCIRG1Q13488 830 aa21.82■■□□□ 1.08
CXXC1-212ENST00000589940 GIGYF2Q6Y7W6 1299 aaKnown RBP21.82■■□□□ 1.08
CXXC1-212ENST00000589940 SMC5Q8IY18 1101 aa21.82■■□□□ 1.08
CXXC1-212ENST00000589940 TBC1D2BQ9UPU7 963 aa21.81■■□□□ 1.08
CXXC1-212ENST00000589940 COL15A1P39059 1388 aa21.81■■□□□ 1.08
CXXC1-212ENST00000589940 CCDC191Q8NCU4 936 aa21.8■■□□□ 1.08
CXXC1-212ENST00000589940 AFDNP55196 1824 aaKnown RBP21.8■■□□□ 1.08
CXXC1-212ENST00000589940 HMMRO75330 724 aa21.8■■□□□ 1.08
CXXC1-212ENST00000589940 HSP90AB3PQ58FF7 597 aa21.8■■□□□ 1.08
CXXC1-212ENST00000589940 SLC27A3Q5K4L6 730 aa21.8■■□□□ 1.08
CXXC1-212ENST00000589940 ISCA1Q9BUE6 129 aa21.8■■□□□ 1.08
CXXC1-212ENST00000589940 CWC25Q9NXE8 425 aaPredicted RBP21.8■■□□□ 1.08
CXXC1-212ENST00000589940 TRIM28Q13263 835 aaKnown RBP21.79■■□□□ 1.08
CXXC1-212ENST00000589940 HLFQ16534 295 aa21.79■■□□□ 1.08
CXXC1-212ENST00000589940 GCC1Q96CN9 775 aa21.79■■□□□ 1.08
CXXC1-212ENST00000589940 TAF1LQ8IZX4 1826 aa21.79■■□□□ 1.08
CXXC1-212ENST00000589940 ATP8B2P98198 1209 aa21.79■■□□□ 1.08
CXXC1-212ENST00000589940 LRRC4BQ9NT99 713 aa21.79■■□□□ 1.08
CXXC1-212ENST00000589940 A0A087WZG4 1122 aa21.78■■□□□ 1.08
CXXC1-212ENST00000589940 RPS6KA4O75676 772 aa21.77■■□□□ 1.08
CXXC1-212ENST00000589940 DCTPP1Q9H773 170 aa21.76■■□□□ 1.07
CXXC1-212ENST00000589940 C4BP0C0L5 1744 aa21.76■■□□□ 1.07
CXXC1-212ENST00000589940 PLSCR1O15162 318 aa21.76■■□□□ 1.07
CXXC1-212ENST00000589940 GNPATO15228 680 aa21.76■■□□□ 1.07
CXXC1-212ENST00000589940 CAMTA2O94983 1202 aa21.76■■□□□ 1.07
CXXC1-212ENST00000589940 SUCLG2Q96I99 432 aa21.76■■□□□ 1.07
CXXC1-212ENST00000589940 PNMA6EA0A0J9YXQ4 647 aa21.75■■□□□ 1.07
CXXC1-212ENST00000589940 UBE3BQ7Z3V4 1068 aa21.75■■□□□ 1.07
CXXC1-212ENST00000589940 H7C1W4 665 aa21.75■■□□□ 1.07
CXXC1-212ENST00000589940 APBA3O96018 575 aa21.75■■□□□ 1.07
CXXC1-212ENST00000589940 CASP7P55210 303 aa21.75■■□□□ 1.07
CXXC1-212ENST00000589940 MTX1Q13505 466 aa21.75■■□□□ 1.07
CXXC1-212ENST00000589940 KAZALD1Q96I82 304 aa21.75■■□□□ 1.07
CXXC1-212ENST00000589940 PDZRN3Q9UPQ7 1066 aa21.75■■□□□ 1.07
CXXC1-212ENST00000589940 HMGB2P26583 209 aaKnown RBP21.74■■□□□ 1.07
CXXC1-212ENST00000589940 PPP1R42Q7Z4L9 355 aa21.74■■□□□ 1.07
CXXC1-212ENST00000589940 ILDR1Q86SU0 546 aaPredicted RBP21.74■■□□□ 1.07
CXXC1-212ENST00000589940 SKAP1Q86WV1 359 aa21.74■■□□□ 1.07
CXXC1-212ENST00000589940 RTCBQ9Y3I0 505 aaKnown RBP21.74■■□□□ 1.07
CXXC1-212ENST00000589940 TXNRD1Q16881 649 aa21.74■■□□□ 1.07
CXXC1-212ENST00000589940 SSH3Q8TE77 659 aa21.74■■□□□ 1.07
CXXC1-212ENST00000589940 NUP98P52948 1817 aa21.73■■□□□ 1.07
CXXC1-212ENST00000589940 ANKRD36CQ5JPF3 1778 aa21.73■■□□□ 1.07
CXXC1-212ENST00000589940 AK7Q96M32 723 aa21.73■■□□□ 1.07
CXXC1-212ENST00000589940 SRGAP3O43295 1099 aa21.72■■□□□ 1.07
CXXC1-212ENST00000589940 POLA2Q14181 598 aa21.72■■□□□ 1.07
CXXC1-212ENST00000589940 NLRP10Q86W26 655 aa21.72■■□□□ 1.07
CXXC1-212ENST00000589940 BICC1Q9H694 974 aaKnown RBP21.72■■□□□ 1.07
CXXC1-212ENST00000589940 RGL2O15211 777 aa21.72■■□□□ 1.07
CXXC1-212ENST00000589940 GPTP24298 496 aa21.72■■□□□ 1.07
CXXC1-212ENST00000589940 NUCB1Q02818 461 aa21.72■■□□□ 1.07
CXXC1-212ENST00000589940 ZNF34Q8IZ26 560 aa21.72■■□□□ 1.07
CXXC1-212ENST00000589940 PROM2Q8N271 834 aa21.72■■□□□ 1.07
CXXC1-212ENST00000589940 JARID2Q92833 1246 aaPredicted RBP21.72■■□□□ 1.07
CXXC1-212ENST00000589940 TNS1Q9HBL0 1735 aaKnown RBP21.72■■□□□ 1.07
CXXC1-212ENST00000589940 ZNF652Q9Y2D9 606 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms