RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 DDX21Q9NR30 783 aaKnown RBP eCLIP17.35■□□□□ 0.37
RETREG3-208ENST00000589797 ZNF853P0CG23 659 aa17.34■□□□□ 0.37
RETREG3-208ENST00000589797 ABCA6Q8N139 1617 aa17.34■□□□□ 0.37
RETREG3-208ENST00000589797 CHST3Q7LGC8 479 aa17.34■□□□□ 0.37
RETREG3-208ENST00000589797 FAM89AQ96GI7 184 aa17.34■□□□□ 0.37
RETREG3-208ENST00000589797 PHF23Q9BUL5 403 aaPredicted RBP17.34■□□□□ 0.37
RETREG3-208ENST00000589797 BTG4Q9NY30 223 aa17.34■□□□□ 0.37
RETREG3-208ENST00000589797 SAMD1Q6SPF0 538 aaPredicted RBP17.34■□□□□ 0.37
RETREG3-208ENST00000589797 ZNF594Q96JF6 807 aaPredicted RBP17.34■□□□□ 0.37
RETREG3-208ENST00000589797 EVI5LQ96CN4 794 aa17.33■□□□□ 0.37
RETREG3-208ENST00000589797 LIMCH1Q9UPQ0 1083 aa17.33■□□□□ 0.37
RETREG3-208ENST00000589797 MBD3O95983 291 aa17.33■□□□□ 0.36
RETREG3-208ENST00000589797 TMX4Q9H1E5 349 aaPredicted RBP17.33■□□□□ 0.36
RETREG3-208ENST00000589797 DHX16O60231 1041 aaKnown RBP17.33■□□□□ 0.36
RETREG3-208ENST00000589797 SASS6Q6UVJ0 657 aa17.33■□□□□ 0.36
RETREG3-208ENST00000589797 USP6P35125 1406 aa17.33■□□□□ 0.36
RETREG3-208ENST00000589797 NRDCO43847 1150 aa17.32■□□□□ 0.36
RETREG3-208ENST00000589797 TFCP2Q12800 502 aa17.32■□□□□ 0.36
RETREG3-208ENST00000589797 SUCLG2Q96I99 432 aa17.32■□□□□ 0.36
RETREG3-208ENST00000589797 LRP2BPQ9P2M1 347 aa17.32■□□□□ 0.36
RETREG3-208ENST00000589797 RTL1A6NKG5 1358 aa17.32■□□□□ 0.36
RETREG3-208ENST00000589797 PES1O00541 588 aaKnown RBP17.32■□□□□ 0.36
RETREG3-208ENST00000589797 CCDC73Q6ZRK6 1079 aa17.32■□□□□ 0.36
RETREG3-208ENST00000589797 NUP133Q8WUM0 1156 aa17.32■□□□□ 0.36
RETREG3-208ENST00000589797 SHROOM2Q13796 1616 aa17.32■□□□□ 0.36
RETREG3-208ENST00000589797 ABCA9Q8IUA7 1624 aa17.32■□□□□ 0.36
RETREG3-208ENST00000589797 ERICH2A1L162 156 aa17.32■□□□□ 0.36
RETREG3-208ENST00000589797 CD2BP2O95400 341 aaKnown RBP17.32■□□□□ 0.36
RETREG3-208ENST00000589797 PDCP20941 246 aa17.32■□□□□ 0.36
RETREG3-208ENST00000589797 SLC4A8Q2Y0W8 1093 aa17.32■□□□□ 0.36
RETREG3-208ENST00000589797 RBM8AQ9Y5S9 174 aaKnown RBP17.32■□□□□ 0.36
RETREG3-208ENST00000589797 GIGYF1O75420 1035 aaPredicted RBP17.32■□□□□ 0.36
RETREG3-208ENST00000589797 FAM43AQ8N2R8 423 aa17.32■□□□□ 0.36
RETREG3-208ENST00000589797 ZNF592Q92610 1267 aa17.32■□□□□ 0.36
RETREG3-208ENST00000589797 ARAP3Q8WWN8 1544 aa17.31■□□□□ 0.36
RETREG3-208ENST00000589797 PPRC1Q5VV67 1664 aaKnown RBP17.31■□□□□ 0.36
RETREG3-208ENST00000589797 AXIN2Q9Y2T1 843 aa17.31■□□□□ 0.36
RETREG3-208ENST00000589797 ARHGAP31Q2M1Z3 1444 aa17.31■□□□□ 0.36
RETREG3-208ENST00000589797 UNC5CLQ8IV45 518 aa17.31■□□□□ 0.36
RETREG3-208ENST00000589797 DCAF5Q96JK2 942 aa17.31■□□□□ 0.36
RETREG3-208ENST00000589797 IL2RBP14784 551 aa17.31■□□□□ 0.36
RETREG3-208ENST00000589797 ME1P48163 572 aa17.31■□□□□ 0.36
RETREG3-208ENST00000589797 NMIQ13287 307 aaPredicted RBP17.31■□□□□ 0.36
RETREG3-208ENST00000589797 GLIPR1L2Q4G1C9 344 aa17.31■□□□□ 0.36
RETREG3-208ENST00000589797 ALDH1L1O75891 902 aa17.3■□□□□ 0.36
RETREG3-208ENST00000589797 GLI2P10070 1586 aa17.3■□□□□ 0.36
RETREG3-208ENST00000589797 PLEKHG1Q9ULL1 1385 aa17.3■□□□□ 0.36
RETREG3-208ENST00000589797 CCDC144CPQ8IYA2 1237 aa17.3■□□□□ 0.36
RETREG3-208ENST00000589797 FAM227BQ96M60 508 aa17.3■□□□□ 0.36
RETREG3-208ENST00000589797 RAI14Q9P0K7 980 aa17.3■□□□□ 0.36
RETREG3-208ENST00000589797 FAM135BQ49AJ0 1406 aa17.3■□□□□ 0.36
RETREG3-208ENST00000589797 GJB2P29033 226 aa17.3■□□□□ 0.36
RETREG3-208ENST00000589797 CCDC129Q6ZRS4 1044 aa17.3■□□□□ 0.36
RETREG3-208ENST00000589797 KRT85P78386 507 aa17.29■□□□□ 0.36
RETREG3-208ENST00000589797 TSPY26PQ9H489 355 aa17.29■□□□□ 0.36
RETREG3-208ENST00000589797 MINDY4BA8MYZ0 360 aa17.29■□□□□ 0.36
RETREG3-208ENST00000589797 IGSF1Q8N6C5 1336 aa17.29■□□□□ 0.36
RETREG3-208ENST00000589797 AATKQ6ZMQ8 1374 aa17.28■□□□□ 0.36
RETREG3-208ENST00000589797 PKP1Q13835 747 aa17.28■□□□□ 0.36
RETREG3-208ENST00000589797 BRF1Q92994 677 aa17.28■□□□□ 0.36
RETREG3-208ENST00000589797 SPATA32Q96LK8 384 aa17.28■□□□□ 0.36
RETREG3-208ENST00000589797 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.28■□□□□ 0.36
RETREG3-208ENST00000589797 TDO2P48775 406 aa17.28■□□□□ 0.36
RETREG3-208ENST00000589797 RBM25P49756 843 aaKnown RBP17.28■□□□□ 0.36
RETREG3-208ENST00000589797 ARHGEF25Q86VW2 580 aa17.28■□□□□ 0.36
RETREG3-208ENST00000589797 DBNDD2Q9BQY9 259 aa17.28■□□□□ 0.36
RETREG3-208ENST00000589797 SLC52A2Q9HAB3 445 aa17.28■□□□□ 0.36
RETREG3-208ENST00000589797 XRCC6P12956 609 aaKnown RBP eCLIP17.28■□□□□ 0.36
RETREG3-208ENST00000589797 AIDAQ96BJ3 306 aa17.28■□□□□ 0.36
RETREG3-208ENST00000589797 SLAIN2Q9P270 581 aa17.28■□□□□ 0.36
RETREG3-208ENST00000589797 PALD1Q9ULE6 856 aa17.28■□□□□ 0.36
RETREG3-208ENST00000589797 ALKQ9UM73 1620 aa17.27■□□□□ 0.36
RETREG3-208ENST00000589797 TULP4Q9NRJ4 1543 aa17.27■□□□□ 0.36
RETREG3-208ENST00000589797 CKAP2LQ8IYA6 745 aa17.27■□□□□ 0.36
RETREG3-208ENST00000589797 STK38Q15208 465 aa17.27■□□□□ 0.36
RETREG3-208ENST00000589797 R3HCC1Q9Y3T6 440 aaKnown RBP17.27■□□□□ 0.36
RETREG3-208ENST00000589797 AK2P54819 239 aa17.27■□□□□ 0.35
RETREG3-208ENST00000589797 ANKRD1Q15327 319 aa17.27■□□□□ 0.35
RETREG3-208ENST00000589797 TRIM5Q9C035 493 aa17.27■□□□□ 0.35
RETREG3-208ENST00000589797 CFAP74Q9C0B2 1584 aa17.26■□□□□ 0.35
RETREG3-208ENST00000589797 VPS53Q5VIR6 699 aa17.26■□□□□ 0.35
RETREG3-208ENST00000589797 SNX21Q969T3 373 aa17.26■□□□□ 0.35
RETREG3-208ENST00000589797 KIDINS220Q9ULH0 1771 aa17.26■□□□□ 0.35
RETREG3-208ENST00000589797 STX6O43752 255 aa17.26■□□□□ 0.35
RETREG3-208ENST00000589797 FAM173BQ6P4H8 233 aa17.26■□□□□ 0.35
RETREG3-208ENST00000589797 ANO8Q9HCE9 1232 aaPredicted RBP17.26■□□□□ 0.35
RETREG3-208ENST00000589797 ADGRB3O60242 1522 aa17.26■□□□□ 0.35
RETREG3-208ENST00000589797 NLRP1Q9C000 1473 aa17.25■□□□□ 0.35
RETREG3-208ENST00000589797 TTLL7Q6ZT98 887 aa17.25■□□□□ 0.35
RETREG3-208ENST00000589797 CCDC24Q8N4L8 307 aa17.25■□□□□ 0.35
RETREG3-208ENST00000589797 TMEM94Q12767 1356 aa17.25■□□□□ 0.35
RETREG3-208ENST00000589797 DNAJC10Q8IXB1 793 aa17.25■□□□□ 0.35
RETREG3-208ENST00000589797 FAM13BQ9NYF5 915 aa17.25■□□□□ 0.35
RETREG3-208ENST00000589797 ANKRD18BA2A2Z9 1011 aa17.25■□□□□ 0.35
RETREG3-208ENST00000589797 IGHMBP2P38935 993 aaKnown RBP17.25■□□□□ 0.35
RETREG3-208ENST00000589797 ZSCAN31Q96LW9 406 aaPredicted RBP17.25■□□□□ 0.35
RETREG3-208ENST00000589797 MARCH6O60337 910 aa17.24■□□□□ 0.35
RETREG3-208ENST00000589797 ARHGEF10O15013 1369 aa17.24■□□□□ 0.35
RETREG3-208ENST00000589797 ATP7BP35670 1465 aa17.24■□□□□ 0.35
RETREG3-208ENST00000589797 KINO60870 393 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms