RNA–Protein interactions for RNA: ENST00000589669.1

CCDC130-211, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-211ENST00000589669 QSER1Q2KHR3 1735 aa17.64■□□□□ 0.41
CCDC130-211ENST00000589669 RNMTO43148 476 aaKnown RBP17.64■□□□□ 0.41
CCDC130-211ENST00000589669 RC3H1Q5TC82 1133 aaKnown RBP17.64■□□□□ 0.41
CCDC130-211ENST00000589669 SMYD5Q6GMV2 418 aa17.64■□□□□ 0.41
CCDC130-211ENST00000589669 SLC52A2Q9HAB3 445 aa17.64■□□□□ 0.41
CCDC130-211ENST00000589669 COL3A1P02461 1466 aaPredicted RBP17.63■□□□□ 0.41
CCDC130-211ENST00000589669 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.63■□□□□ 0.41
CCDC130-211ENST00000589669 TPRNQ4KMQ1 711 aa17.63■□□□□ 0.41
CCDC130-211ENST00000589669 NUDCQ9Y266 331 aa17.63■□□□□ 0.41
CCDC130-211ENST00000589669 ZNF316A6NFI3 1004 aaPredicted RBP17.62■□□□□ 0.41
CCDC130-211ENST00000589669 RIMBP2O15034 1052 aa17.62■□□□□ 0.41
CCDC130-211ENST00000589669 UTRNP46939 3433 aa17.61■□□□□ 0.41
CCDC130-211ENST00000589669 PTCD1O75127 700 aaKnown RBP17.61■□□□□ 0.41
CCDC130-211ENST00000589669 GNPATO15228 680 aa17.6■□□□□ 0.41
CCDC130-211ENST00000589669 SMIM5Q71RC9 77 aa17.6■□□□□ 0.41
CCDC130-211ENST00000589669 ZNF710Q8N1W2 664 aa17.6■□□□□ 0.41
CCDC130-211ENST00000589669 GAS2L2Q8NHY3 880 aa17.6■□□□□ 0.41
CCDC130-211ENST00000589669 ZSWIM6Q9HCJ5 1215 aa17.6■□□□□ 0.41
CCDC130-211ENST00000589669 C4BP0C0L5 1744 aa17.59■□□□□ 0.41
CCDC130-211ENST00000589669 C5P01031 1676 aa17.59■□□□□ 0.41
CCDC130-211ENST00000589669 SNPHO15079 494 aa17.59■□□□□ 0.41
CCDC130-211ENST00000589669 FCHSD2O94868 740 aa17.59■□□□□ 0.41
CCDC130-211ENST00000589669 PHF14O94880 888 aa17.59■□□□□ 0.41
CCDC130-211ENST00000589669 PRKCSHP14314 528 aaPredicted RBP17.59■□□□□ 0.41
CCDC130-211ENST00000589669 ARSIQ5FYB1 569 aa17.59■□□□□ 0.41
CCDC130-211ENST00000589669 TRAPPC3LQ5T215 181 aa17.59■□□□□ 0.41
CCDC130-211ENST00000589669 KHSRPQ92945 711 aaKnown RBP eCLIP17.59■□□□□ 0.41
CCDC130-211ENST00000589669 RSPH6AQ9H0K4 717 aa17.59■□□□□ 0.41
CCDC130-211ENST00000589669 RTCBQ9Y3I0 505 aaKnown RBP17.59■□□□□ 0.41
CCDC130-211ENST00000589669 CNTNAP4Q9C0A0 1308 aa17.58■□□□□ 0.4
CCDC130-211ENST00000589669 GRXCR2A6NFK2 248 aa17.58■□□□□ 0.4
CCDC130-211ENST00000589669 GNAT3A8MTJ3 354 aa17.58■□□□□ 0.4
CCDC130-211ENST00000589669 RPS6KA4O75676 772 aa17.58■□□□□ 0.4
CCDC130-211ENST00000589669 MSL1Q68DK7 614 aa17.58■□□□□ 0.4
CCDC130-211ENST00000589669 GPR153Q6NV75 609 aa17.58■□□□□ 0.4
CCDC130-211ENST00000589669 IL17REQ8NFR9 667 aa17.58■□□□□ 0.4
CCDC130-211ENST00000589669 DDX12PQ92771 950 aa17.58■□□□□ 0.4
CCDC130-211ENST00000589669 PHACTR3Q96KR7 559 aa17.58■□□□□ 0.4
CCDC130-211ENST00000589669 TAF1LQ8IZX4 1826 aa17.58■□□□□ 0.4
CCDC130-211ENST00000589669 U2AF1L5P0DN76 240 aaPredicted RBP17.57■□□□□ 0.4
CCDC130-211ENST00000589669 U2AF1Q01081 240 aaKnown RBP eCLIP17.57■□□□□ 0.4
CCDC130-211ENST00000589669 COL24A1Q17RW2 1714 aa17.57■□□□□ 0.4
CCDC130-211ENST00000589669 TUBGCP6Q96RT7 1819 aa17.56■□□□□ 0.4
CCDC130-211ENST00000589669 PRKAR2BP31323 418 aa17.56■□□□□ 0.4
CCDC130-211ENST00000589669 NUDT7P0C024 238 aa17.55■□□□□ 0.4
CCDC130-211ENST00000589669 SLC39A6Q13433 755 aa17.55■□□□□ 0.4
CCDC130-211ENST00000589669 CD2APQ9Y5K6 639 aa17.55■□□□□ 0.4
CCDC130-211ENST00000589669 ZNF831Q5JPB2 1677 aa17.55■□□□□ 0.4
CCDC130-211ENST00000589669 CRKLP46109 303 aaKnown RBP17.54■□□□□ 0.4
CCDC130-211ENST00000589669 NLGN1Q8N2Q7 840 aa17.54■□□□□ 0.4
CCDC130-211ENST00000589669 GOLGB1Q14789 3259 aaKnown RBP17.54■□□□□ 0.4
CCDC130-211ENST00000589669 RBM26Q5T8P6 1007 aaKnown RBP17.53■□□□□ 0.4
CCDC130-211ENST00000589669 INTS5Q6P9B9 1019 aaKnown RBP17.53■□□□□ 0.4
CCDC130-211ENST00000589669 NLGN2Q8NFZ4 835 aa17.53■□□□□ 0.4
CCDC130-211ENST00000589669 MRC1P22897 1456 aa17.52■□□□□ 0.4
CCDC130-211ENST00000589669 YY1P25490 414 aa17.52■□□□□ 0.4
CCDC130-211ENST00000589669 RFC4P35249 363 aa17.52■□□□□ 0.4
CCDC130-211ENST00000589669 TEFQ10587 303 aa17.52■□□□□ 0.4
CCDC130-211ENST00000589669 DDX10Q13206 875 aaKnown RBP17.52■□□□□ 0.4
CCDC130-211ENST00000589669 RALBP1Q15311 655 aa17.52■□□□□ 0.4
CCDC130-211ENST00000589669 DNAJC10Q8IXB1 793 aa17.52■□□□□ 0.4
CCDC130-211ENST00000589669 SCN11AQ9UI33 1791 aa17.51■□□□□ 0.39
CCDC130-211ENST00000589669 CYP19A1P11511 503 aaPredicted RBP17.51■□□□□ 0.39
CCDC130-211ENST00000589669 GPR162Q16538 588 aa17.51■□□□□ 0.39
CCDC130-211ENST00000589669 UBR3Q6ZT12 1888 aa17.51■□□□□ 0.39
CCDC130-211ENST00000589669 CEMIPQ8WUJ3 1361 aa17.51■□□□□ 0.39
CCDC130-211ENST00000589669 HTATSF1O43719 755 aaKnown RBP17.5■□□□□ 0.39
CCDC130-211ENST00000589669 GYS1P13807 737 aa17.5■□□□□ 0.39
CCDC130-211ENST00000589669 ADAMTS7Q9UKP4 1686 aa17.49■□□□□ 0.39
CCDC130-211ENST00000589669 MMP10P09238 476 aa17.49■□□□□ 0.39
CCDC130-211ENST00000589669 OSBPP22059 807 aa17.49■□□□□ 0.39
CCDC130-211ENST00000589669 ZNF790Q6PG37 636 aa17.49■□□□□ 0.39
CCDC130-211ENST00000589669 TTC5Q8N0Z6 440 aa17.49■□□□□ 0.39
CCDC130-211ENST00000589669 CCDC87Q9NVE4 849 aa17.49■□□□□ 0.39
CCDC130-211ENST00000589669 RTF1Q92541 710 aaKnown RBP17.48■□□□□ 0.39
CCDC130-211ENST00000589669 TEX13AQ9BXU3 409 aaPredicted RBP17.48■□□□□ 0.39
CCDC130-211ENST00000589669 ZNF496Q96IT1 587 aaPredicted RBP17.47■□□□□ 0.39
CCDC130-211ENST00000589669 PLEKHF1Q96S99 279 aa17.47■□□□□ 0.39
CCDC130-211ENST00000589669 PNNQ9H307 717 aaKnown RBP17.47■□□□□ 0.39
CCDC130-211ENST00000589669 BTBD11A6QL63 1104 aa17.46■□□□□ 0.39
CCDC130-211ENST00000589669 GRIN3BO60391 1043 aa17.46■□□□□ 0.39
CCDC130-211ENST00000589669 STARD3NLO95772 234 aa17.46■□□□□ 0.39
CCDC130-211ENST00000589669 HOXB1P14653 301 aaPredicted RBP17.46■□□□□ 0.39
CCDC130-211ENST00000589669 NEFMP07197 916 aa17.45■□□□□ 0.38
CCDC130-211ENST00000589669 ZEB1P37275 1124 aaPredicted RBP17.45■□□□□ 0.38
CCDC130-211ENST00000589669 KCPQ6ZWJ8 1503 aa17.45■□□□□ 0.38
CCDC130-211ENST00000589669 SOS1Q07889 1333 aaPredicted RBP17.45■□□□□ 0.38
CCDC130-211ENST00000589669 USP42Q9H9J4 1324 aaKnown RBP17.45■□□□□ 0.38
CCDC130-211ENST00000589669 MYH14Q7Z406 1995 aaKnown RBP17.44■□□□□ 0.38
CCDC130-211ENST00000589669 MCM10Q7L590 875 aa17.44■□□□□ 0.38
CCDC130-211ENST00000589669 FMNL2Q96PY5 1086 aa17.44■□□□□ 0.38
CCDC130-211ENST00000589669 COL5A3P25940 1745 aaPredicted RBP17.44■□□□□ 0.38
CCDC130-211ENST00000589669 ZPR1O75312 459 aa17.43■□□□□ 0.38
CCDC130-211ENST00000589669 YBX3P16989 372 aaKnown RBP eCLIP17.43■□□□□ 0.38
CCDC130-211ENST00000589669 TM4SF1P30408 202 aa17.43■□□□□ 0.38
CCDC130-211ENST00000589669 TGFB2P61812 414 aa17.43■□□□□ 0.38
CCDC130-211ENST00000589669 SRP68Q9UHB9 627 aaKnown RBP17.43■□□□□ 0.38
CCDC130-211ENST00000589669 PCDHGA10Q9Y5H3 936 aa17.43■□□□□ 0.38
CCDC130-211ENST00000589669 PARP3Q9Y6F1 533 aa17.43■□□□□ 0.38
CCDC130-211ENST00000589669 CICQ96RK0 1608 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms