RNA–Protein interactions for RNA: ENST00000589655.1

RAB3D-202, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB3D, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-202ENST00000589655 ARFGEF2Q9Y6D5 1785 aa21.66■■□□□ 1.06
RAB3D-202ENST00000589655 LTBP3Q9NS15 1303 aa21.66■■□□□ 1.06
RAB3D-202ENST00000589655 DCTN1Q14203 1278 aa21.66■■□□□ 1.06
RAB3D-202ENST00000589655 NBPF26B4DH59 902 aa21.65■■□□□ 1.06
RAB3D-202ENST00000589655 U2AF1L5P0DN76 240 aaPredicted RBP21.65■■□□□ 1.06
RAB3D-202ENST00000589655 U2AF1Q01081 240 aaKnown RBP eCLIP21.65■■□□□ 1.06
RAB3D-202ENST00000589655 ERFEQ4G0M1 354 aa21.65■■□□□ 1.06
RAB3D-202ENST00000589655 STYK1Q6J9G0 422 aa21.65■■□□□ 1.06
RAB3D-202ENST00000589655 PRPF40BQ6NWY9 871 aaKnown RBP21.65■■□□□ 1.06
RAB3D-202ENST00000589655 NBPF10Q6P3W6 841 aaKnown RBP21.65■■□□□ 1.06
RAB3D-202ENST00000589655 NBPF15Q8N660 670 aa21.65■■□□□ 1.06
RAB3D-202ENST00000589655 SNRPA1P09661 255 aaKnown RBP21.64■■□□□ 1.05
RAB3D-202ENST00000589655 COL13A1Q5TAT6 717 aaPredicted RBP21.64■■□□□ 1.05
RAB3D-202ENST00000589655 CNKSR1Q969H4 720 aa21.64■■□□□ 1.05
RAB3D-202ENST00000589655 TAOK3Q9H2K8 898 aa21.64■■□□□ 1.05
RAB3D-202ENST00000589655 NUDCQ9Y266 331 aa21.64■■□□□ 1.05
RAB3D-202ENST00000589655 PCNTO95613 3336 aa21.64■■□□□ 1.05
RAB3D-202ENST00000589655 ST5P78524 1137 aa21.63■■□□□ 1.05
RAB3D-202ENST00000589655 DPY19L2Q6NUT2 758 aa21.63■■□□□ 1.05
RAB3D-202ENST00000589655 CLEC4GQ6UXB4 293 aa21.63■■□□□ 1.05
RAB3D-202ENST00000589655 NPM2Q86SE8 214 aaKnown RBP21.63■■□□□ 1.05
RAB3D-202ENST00000589655 C7orf43Q8WVR3 580 aa21.63■■□□□ 1.05
RAB3D-202ENST00000589655 MASTLQ96GX5 879 aa21.62■■□□□ 1.05
RAB3D-202ENST00000589655 NPHP1O15259 732 aa21.61■■□□□ 1.05
RAB3D-202ENST00000589655 NBPF5PQ86XG9 351 aaPredicted RBP21.61■■□□□ 1.05
RAB3D-202ENST00000589655 KLRG2A4D1S0 409 aaPredicted RBP21.6■■□□□ 1.05
RAB3D-202ENST00000589655 DDNO94850 711 aaPredicted RBP21.6■■□□□ 1.05
RAB3D-202ENST00000589655 RTF1Q92541 710 aaKnown RBP21.6■■□□□ 1.05
RAB3D-202ENST00000589655 POTEIP0CG38 1075 aa21.59■■□□□ 1.05
RAB3D-202ENST00000589655 POTEJP0CG39 1038 aa21.59■■□□□ 1.05
RAB3D-202ENST00000589655 HTATSF1O43719 755 aaKnown RBP21.58■■□□□ 1.05
RAB3D-202ENST00000589655 MIS18AQ9NYP9 233 aa21.58■■□□□ 1.05
RAB3D-202ENST00000589655 HLFQ16534 295 aa21.57■■□□□ 1.04
RAB3D-202ENST00000589655 OLFM4Q6UX06 510 aa21.57■■□□□ 1.04
RAB3D-202ENST00000589655 NIP7Q9Y221 180 aaKnown RBP eCLIP21.57■■□□□ 1.04
RAB3D-202ENST00000589655 ZNF652Q9Y2D9 606 aa21.57■■□□□ 1.04
RAB3D-202ENST00000589655 RGL2O15211 777 aa21.56■■□□□ 1.04
RAB3D-202ENST00000589655 NPR1P16066 1061 aa21.56■■□□□ 1.04
RAB3D-202ENST00000589655 TAF7Q15545 349 aaPredicted RBP21.56■■□□□ 1.04
RAB3D-202ENST00000589655 SOGA3Q5TF21 947 aa21.56■■□□□ 1.04
RAB3D-202ENST00000589655 LAMB4A4D0S4 1761 aa21.56■■□□□ 1.04
RAB3D-202ENST00000589655 DLG5Q8TDM6 1919 aa21.55■■□□□ 1.04
RAB3D-202ENST00000589655 KDM3BQ7LBC6 1761 aa21.54■■□□□ 1.04
RAB3D-202ENST00000589655 FAM177BA6PVY3 158 aa21.54■■□□□ 1.04
RAB3D-202ENST00000589655 CCDC93Q567U6 631 aa21.54■■□□□ 1.04
RAB3D-202ENST00000589655 CHADLQ6NUI6 762 aa21.54■■□□□ 1.04
RAB3D-202ENST00000589655 TPTE2Q6XPS3 522 aa21.54■■□□□ 1.04
RAB3D-202ENST00000589655 L3MBTL3Q96JM7 780 aaPredicted RBP21.53■■□□□ 1.04
RAB3D-202ENST00000589655 HSPA1AP0DMV8 641 aaKnown RBP21.52■■□□□ 1.04
RAB3D-202ENST00000589655 HSPA1BP0DMV9 641 aaKnown RBP21.52■■□□□ 1.04
RAB3D-202ENST00000589655 FKBP4Q02790 459 aaKnown RBP eCLIP21.52■■□□□ 1.04
RAB3D-202ENST00000589655 ZNF277Q9NRM2 450 aaPredicted RBP21.52■■□□□ 1.04
RAB3D-202ENST00000589655 SNED1Q8TER0 1413 aa21.52■■□□□ 1.04
RAB3D-202ENST00000589655 ZNF541Q9H0D2 1346 aa21.52■■□□□ 1.03
RAB3D-202ENST00000589655 PLEKHF1Q96S99 279 aa21.51■■□□□ 1.03
RAB3D-202ENST00000589655 SCN4AP35499 1836 aa21.5■■□□□ 1.03
RAB3D-202ENST00000589655 ABCC12Q96J65 1359 aa21.5■■□□□ 1.03
RAB3D-202ENST00000589655 TAF1DQ9H5J8 278 aaPredicted RBP21.5■■□□□ 1.03
RAB3D-202ENST00000589655 THUMPD2Q9BTF0 503 aaKnown RBP21.49■■□□□ 1.03
RAB3D-202ENST00000589655 CREBZFQ9NS37 354 aa21.49■■□□□ 1.03
RAB3D-202ENST00000589655 NUP98P52948 1817 aa21.49■■□□□ 1.03
RAB3D-202ENST00000589655 PASKQ96RG2 1323 aa21.49■■□□□ 1.03
RAB3D-202ENST00000589655 EIF4A1P60842 406 aaKnown RBP21.48■■□□□ 1.03
RAB3D-202ENST00000589655 CRY2Q49AN0 593 aa21.48■■□□□ 1.03
RAB3D-202ENST00000589655 TTLL7Q6ZT98 887 aa21.48■■□□□ 1.03
RAB3D-202ENST00000589655 NGEFQ8N5V2 710 aa21.48■■□□□ 1.03
RAB3D-202ENST00000589655 ADAMTSL1Q8N6G6 1762 aa21.47■■□□□ 1.03
RAB3D-202ENST00000589655 IQCA1LA6NCM1 817 aa21.47■■□□□ 1.03
RAB3D-202ENST00000589655 NUTM1Q86Y26 1132 aa21.47■■□□□ 1.03
RAB3D-202ENST00000589655 TNS4Q8IZW8 715 aa21.47■■□□□ 1.03
RAB3D-202ENST00000589655 MKRN1Q9UHC7 482 aaKnown RBP21.47■■□□□ 1.03
RAB3D-202ENST00000589655 ERVV-1B6SEH8 477 aa21.46■■□□□ 1.03
RAB3D-202ENST00000589655 LDHDQ86WU2 507 aa21.46■■□□□ 1.03
RAB3D-202ENST00000589655 RTKN2Q8IZC4 609 aa21.46■■□□□ 1.03
RAB3D-202ENST00000589655 MAP3K15Q6ZN16 1313 aa21.46■■□□□ 1.03
RAB3D-202ENST00000589655 COL4A5P29400 1685 aa21.46■■□□□ 1.03
RAB3D-202ENST00000589655 ITGBL1O95965 494 aaPredicted RBP21.45■■□□□ 1.02
RAB3D-202ENST00000589655 ALDH1B1P30837 517 aa21.45■■□□□ 1.02
RAB3D-202ENST00000589655 NFE2L2Q16236 605 aa21.45■■□□□ 1.02
RAB3D-202ENST00000589655 SLC51AQ86UW1 340 aa21.45■■□□□ 1.02
RAB3D-202ENST00000589655 SYNE4Q8N205 404 aa21.45■■□□□ 1.02
RAB3D-202ENST00000589655 PNISRQ8TF01 805 aaKnown RBP21.45■■□□□ 1.02
RAB3D-202ENST00000589655 RRP7AQ9Y3A4 280 aaKnown RBP21.45■■□□□ 1.02
RAB3D-202ENST00000589655 UBN2Q6ZU65 1347 aa21.45■■□□□ 1.02
RAB3D-202ENST00000589655 FZD9O00144 591 aa21.44■■□□□ 1.02
RAB3D-202ENST00000589655 GTF2E1P29083 439 aaPredicted RBP21.44■■□□□ 1.02
RAB3D-202ENST00000589655 IARSP41252 1262 aaKnown RBP21.44■■□□□ 1.02
RAB3D-202ENST00000589655 CAPN15O75808 1086 aa21.43■■□□□ 1.02
RAB3D-202ENST00000589655 MYL6BP14649 208 aa21.42■■□□□ 1.02
RAB3D-202ENST00000589655 GPTP24298 496 aa21.42■■□□□ 1.02
RAB3D-202ENST00000589655 CNTNAP1P78357 1384 aa21.42■■□□□ 1.02
RAB3D-202ENST00000589655 RIC1Q4ADV7 1423 aa21.42■■□□□ 1.02
RAB3D-202ENST00000589655 SUSD4Q5VX71 490 aa21.42■■□□□ 1.02
RAB3D-202ENST00000589655 RNF123Q5XPI4 1314 aa21.42■■□□□ 1.02
RAB3D-202ENST00000589655 PSMD1Q99460 953 aa21.42■■□□□ 1.02
RAB3D-202ENST00000589655 NYXQ9GZU5 481 aa21.42■■□□□ 1.02
RAB3D-202ENST00000589655 ZBTB3Q9H5J0 574 aa21.42■■□□□ 1.02
RAB3D-202ENST00000589655 HACL1Q9UJ83 578 aa21.42■■□□□ 1.02
RAB3D-202ENST00000589655 IBTKQ9P2D0 1353 aaPredicted RBP21.41■■□□□ 1.02
RAB3D-202ENST00000589655 HOXA10P31260 410 aaPredicted RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms