RNA–Protein interactions for RNA: ENST00000589286.1

HMGN1P30-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 30, humanhuman

BASIC

Gene HMGN1P30, Length 268 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P30-201ENST00000589286 CFHR5Q9BXR6 569 aa6.78□□□□□ -1.32
HMGN1P30-201ENST00000589286 COL25A1Q9BXS0 654 aaPredicted RBP6.78□□□□□ -1.32
HMGN1P30-201ENST00000589286 ZCCHC2Q9C0B9 1178 aaKnown RBP6.78□□□□□ -1.32
HMGN1P30-201ENST00000589286 ATXN7L1Q9ULK2 861 aaPredicted RBP6.78□□□□□ -1.32
HMGN1P30-201ENST00000589286 NSFL1CQ9UNZ2 370 aaKnown RBP6.78□□□□□ -1.32
HMGN1P30-201ENST00000589286 SAMD5Q5TGI4 173 aa6.77□□□□□ -1.33
HMGN1P30-201ENST00000589286 COL26A1Q96A83 441 aa6.77□□□□□ -1.33
HMGN1P30-201ENST00000589286 MKNK1Q9BUB5 465 aa6.77□□□□□ -1.33
HMGN1P30-201ENST00000589286 MTMR7Q9Y216 660 aa6.77□□□□□ -1.33
HMGN1P30-201ENST00000589286 LCE2AQ5TA79 106 aaPredicted RBP6.76□□□□□ -1.33
HMGN1P30-201ENST00000589286 SUSD3Q96L08 255 aa6.76□□□□□ -1.33
HMGN1P30-201ENST00000589286 KHNYNO15037 678 aaKnown RBP6.75□□□□□ -1.33
HMGN1P30-201ENST00000589286 BNIP3LO60238 219 aa6.75□□□□□ -1.33
HMGN1P30-201ENST00000589286 THBS1P07996 1170 aa6.75□□□□□ -1.33
HMGN1P30-201ENST00000589286 FAM157BP0CG42 384 aa6.75□□□□□ -1.33
HMGN1P30-201ENST00000589286 MX2P20592 715 aa6.75□□□□□ -1.33
HMGN1P30-201ENST00000589286 C11orf91Q3C1V1 193 aa6.75□□□□□ -1.33
HMGN1P30-201ENST00000589286 C7orf43Q8WVR3 580 aa6.75□□□□□ -1.33
HMGN1P30-201ENST00000589286 ABHD17AQ96GS6 310 aa6.75□□□□□ -1.33
HMGN1P30-201ENST00000589286 MYO19Q96H55 970 aa6.75□□□□□ -1.33
HMGN1P30-201ENST00000589286 HSH2DQ96JZ2 352 aa6.75□□□□□ -1.33
HMGN1P30-201ENST00000589286 CEP63Q96MT8 703 aa6.75□□□□□ -1.33
HMGN1P30-201ENST00000589286 CNTNAP3BQ96NU0 1288 aa6.75□□□□□ -1.33
HMGN1P30-201ENST00000589286 CNTNAP3Q9BZ76 1288 aa6.75□□□□□ -1.33
HMGN1P30-201ENST00000589286 MBIPQ9NS73 344 aa6.75□□□□□ -1.33
HMGN1P30-201ENST00000589286 DCDC2BA2VCK2 349 aa6.74□□□□□ -1.33
HMGN1P30-201ENST00000589286 WIPF1O43516 503 aa6.74□□□□□ -1.33
HMGN1P30-201ENST00000589286 FGFR3P22607 806 aa6.74□□□□□ -1.33
HMGN1P30-201ENST00000589286 SSFA2P28290 1259 aa6.74□□□□□ -1.33
HMGN1P30-201ENST00000589286 DGKZQ13574 1117 aa6.74□□□□□ -1.33
HMGN1P30-201ENST00000589286 LAMC2Q13753 1193 aa6.74□□□□□ -1.33
HMGN1P30-201ENST00000589286 UBAP2LQ14157 1087 aaKnown RBP6.74□□□□□ -1.33
HMGN1P30-201ENST00000589286 LCE2CQ5TA81 110 aa6.74□□□□□ -1.33
HMGN1P30-201ENST00000589286 C16orf46Q6P387 395 aa6.74□□□□□ -1.33
HMGN1P30-201ENST00000589286 QTRT2Q9H974 415 aaKnown RBP6.74□□□□□ -1.33
HMGN1P30-201ENST00000589286 SLAIN2Q9P270 581 aa6.74□□□□□ -1.33
HMGN1P30-201ENST00000589286 CARNS1A5YM72 827 aa6.73□□□□□ -1.33
HMGN1P30-201ENST00000589286 TGFBR3LH3BV60 316 aa6.73□□□□□ -1.33
HMGN1P30-201ENST00000589286 MAPTP10636 758 aaKnown RBP6.73□□□□□ -1.33
HMGN1P30-201ENST00000589286 INSM1Q01101 510 aaPredicted RBP6.73□□□□□ -1.33
HMGN1P30-201ENST00000589286 TNP2Q05952 138 aa6.73□□□□□ -1.33
HMGN1P30-201ENST00000589286 GAS6Q14393 721 aa6.73□□□□□ -1.33
HMGN1P30-201ENST00000589286 NAA30Q147X3 362 aaPredicted RBP6.73□□□□□ -1.33
HMGN1P30-201ENST00000589286 RNFT1Q5M7Z0 435 aa6.73□□□□□ -1.33
HMGN1P30-201ENST00000589286 IER5Q5VY09 327 aa6.73□□□□□ -1.33
HMGN1P30-201ENST00000589286 NDFIP2Q9NV92 336 aa6.73□□□□□ -1.33
HMGN1P30-201ENST00000589286 KLK14Q9P0G3 267 aa6.73□□□□□ -1.33
HMGN1P30-201ENST00000589286 BMP4P12644 408 aa6.72□□□□□ -1.33
HMGN1P30-201ENST00000589286 EPB42P16452 691 aa6.72□□□□□ -1.33
HMGN1P30-201ENST00000589286 MAP2K3P46734 347 aa6.72□□□□□ -1.33
HMGN1P30-201ENST00000589286 SRSF11Q05519 484 aaKnown RBP6.72□□□□□ -1.33
HMGN1P30-201ENST00000589286 COX20Q5RI15 118 aa6.72□□□□□ -1.33
HMGN1P30-201ENST00000589286 BTLAQ7Z6A9 289 aa6.72□□□□□ -1.33
HMGN1P30-201ENST00000589286 ZNF280CQ8ND82 737 aa6.72□□□□□ -1.33
HMGN1P30-201ENST00000589286 IFT43Q96FT9 208 aa6.72□□□□□ -1.33
HMGN1P30-201ENST00000589286 MARK1Q9P0L2 795 aa6.72□□□□□ -1.33
HMGN1P30-201ENST00000589286 BRD2P25440 801 aaKnown RBP6.71□□□□□ -1.34
HMGN1P30-201ENST00000589286 KRT76Q01546 638 aa6.71□□□□□ -1.34
HMGN1P30-201ENST00000589286 BRD7Q9NPI1 651 aa6.71□□□□□ -1.34
HMGN1P30-201ENST00000589286 IGF1RP08069 1367 aa6.7□□□□□ -1.34
HMGN1P30-201ENST00000589286 EFSO43281 561 aa6.7□□□□□ -1.34
HMGN1P30-201ENST00000589286 ADAMTS2O95450 1211 aa6.7□□□□□ -1.34
HMGN1P30-201ENST00000589286 CD33P20138 364 aa6.7□□□□□ -1.34
HMGN1P30-201ENST00000589286 TYRO3Q06418 890 aa6.7□□□□□ -1.34
HMGN1P30-201ENST00000589286 NEUROD1Q13562 356 aa6.7□□□□□ -1.34
HMGN1P30-201ENST00000589286 FAM182BQ5T319 152 aa6.7□□□□□ -1.34
HMGN1P30-201ENST00000589286 CAPN12Q6ZSI9 719 aa6.7□□□□□ -1.34
HMGN1P30-201ENST00000589286 KLRG1Q96E93 195 aa6.7□□□□□ -1.34
HMGN1P30-201ENST00000589286 SEPT3Q9UH03 358 aa6.7□□□□□ -1.34
HMGN1P30-201ENST00000589286 LRFN2Q9ULH4 789 aa6.7□□□□□ -1.34
HMGN1P30-201ENST00000589286 PRR12Q9ULL5 1215 aa6.7□□□□□ -1.34
HMGN1P30-201ENST00000589286 KCNH4Q9UQ05 1017 aa6.7□□□□□ -1.34
HMGN1P30-201ENST00000589286 MICAL2O94851 1124 aa6.69□□□□□ -1.34
HMGN1P30-201ENST00000589286 ARID4AP29374 1257 aaPredicted RBP6.69□□□□□ -1.34
HMGN1P30-201ENST00000589286 IDH3AP50213 366 aa6.69□□□□□ -1.34
HMGN1P30-201ENST00000589286 CTBSQ01459 385 aa6.69□□□□□ -1.34
HMGN1P30-201ENST00000589286 ABTB2Q8N961 1025 aa6.69□□□□□ -1.34
HMGN1P30-201ENST00000589286 SAP130Q9H0E3 1048 aa6.69□□□□□ -1.34
HMGN1P30-201ENST00000589286 STIM2Q9P246 746 aa6.69□□□□□ -1.34
HMGN1P30-201ENST00000589286 ARSDP51689 593 aa6.68□□□□□ -1.34
HMGN1P30-201ENST00000589286 PHLDB3Q6NSJ2 640 aa6.68□□□□□ -1.34
HMGN1P30-201ENST00000589286 TREML1Q86YW5 311 aa6.68□□□□□ -1.34
HMGN1P30-201ENST00000589286 ZSCAN1Q8NBB4 408 aa6.68□□□□□ -1.34
HMGN1P30-201ENST00000589286 HELQQ8TDG4 1101 aa6.68□□□□□ -1.34
HMGN1P30-201ENST00000589286 FAM13BQ9NYF5 915 aa6.68□□□□□ -1.34
HMGN1P30-201ENST00000589286 BCS1LQ9Y276 419 aa6.68□□□□□ -1.34
HMGN1P30-201ENST00000589286 BRD1O95696 1058 aa6.67□□□□□ -1.34
HMGN1P30-201ENST00000589286 ABL1P00519 1130 aa6.67□□□□□ -1.34
HMGN1P30-201ENST00000589286 SLURP2P0DP57 97 aa6.67□□□□□ -1.34
HMGN1P30-201ENST00000589286 KCNQ4P56696 695 aa6.67□□□□□ -1.34
HMGN1P30-201ENST00000589286 MAP3K10Q02779 954 aa6.67□□□□□ -1.34
HMGN1P30-201ENST00000589286 SFSWAPQ12872 951 aaKnown RBP6.67□□□□□ -1.34
HMGN1P30-201ENST00000589286 GTF3C2Q8WUA4 911 aaPredicted RBP6.67□□□□□ -1.34
HMGN1P30-201ENST00000589286 GDF2Q9UK05 429 aaPredicted RBP6.67□□□□□ -1.34
HMGN1P30-201ENST00000589286 FAM181BA6NEQ2 426 aa6.66□□□□□ -1.34
HMGN1P30-201ENST00000589286 INPP5BP32019 993 aa6.66□□□□□ -1.34
HMGN1P30-201ENST00000589286 SCNN1AP37088 669 aa6.66□□□□□ -1.34
HMGN1P30-201ENST00000589286 SPEM2Q0P670 501 aa6.66□□□□□ -1.34
HMGN1P30-201ENST00000589286 SF3B2Q13435 895 aaKnown RBP6.66□□□□□ -1.34
HMGN1P30-201ENST00000589286 GOLGA6L1Q8N7Z2 621 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms