RNA–Protein interactions for RNA: ENST00000589054.5

NEDD4L-225, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3 BASIC

Gene NEDD4L, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-225ENST00000589054 POTECB2RU33 542 aa28.32■■■□□ 2.12
NEDD4L-225ENST00000589054 EIF4A1P60842 406 aaKnown RBP28.32■■■□□ 2.12
NEDD4L-225ENST00000589054 PDZRN3Q9UPQ7 1066 aa28.32■■■□□ 2.12
NEDD4L-225ENST00000589054 STYK1Q6J9G0 422 aa28.31■■■□□ 2.12
NEDD4L-225ENST00000589054 NBPF5PQ86XG9 351 aaPredicted RBP28.31■■■□□ 2.12
NEDD4L-225ENST00000589054 C16orf71Q8IYS4 520 aaPredicted RBP28.31■■■□□ 2.12
NEDD4L-225ENST00000589054 ZC3H4Q9UPT8 1303 aaKnown RBP28.31■■■□□ 2.12
NEDD4L-225ENST00000589054 ST5P78524 1137 aa28.3■■■□□ 2.12
NEDD4L-225ENST00000589054 PRPF40BQ6NWY9 871 aaKnown RBP28.3■■■□□ 2.12
NEDD4L-225ENST00000589054 NIP7Q9Y221 180 aaKnown RBP eCLIP28.3■■■□□ 2.12
NEDD4L-225ENST00000589054 SLX4Q8IY92 1834 aa28.29■■■□□ 2.12
NEDD4L-225ENST00000589054 FAM177BA6PVY3 158 aa28.29■■■□□ 2.12
NEDD4L-225ENST00000589054 C7orf43Q8WVR3 580 aa28.29■■■□□ 2.12
NEDD4L-225ENST00000589054 DLG5Q8TDM6 1919 aa28.29■■■□□ 2.12
NEDD4L-225ENST00000589054 KLRG2A4D1S0 409 aaPredicted RBP28.28■■■□□ 2.12
NEDD4L-225ENST00000589054 NPHP1O15259 732 aa28.28■■■□□ 2.12
NEDD4L-225ENST00000589054 NGEFQ8N5V2 710 aa28.28■■■□□ 2.12
NEDD4L-225ENST00000589054 MASTLQ96GX5 879 aa28.28■■■□□ 2.12
NEDD4L-225ENST00000589054 FSTL1Q12841 308 aa28.27■■■□□ 2.12
NEDD4L-225ENST00000589054 TTLL7Q6ZT98 887 aa28.27■■■□□ 2.12
NEDD4L-225ENST00000589054 CNKSR1Q969H4 720 aa28.27■■■□□ 2.12
NEDD4L-225ENST00000589054 OLFM4Q6UX06 510 aa28.26■■■□□ 2.11
NEDD4L-225ENST00000589054 ZNF652Q9Y2D9 606 aa28.26■■■□□ 2.11
NEDD4L-225ENST00000589054 CCDC88AQ3V6T2 1871 aa28.25■■■□□ 2.11
NEDD4L-225ENST00000589054 KDM3BQ7LBC6 1761 aa28.25■■■□□ 2.11
NEDD4L-225ENST00000589054 PNISRQ8TF01 805 aaKnown RBP28.25■■■□□ 2.11
NEDD4L-225ENST00000589054 RRP7AQ9Y3A4 280 aaKnown RBP28.25■■■□□ 2.11
NEDD4L-225ENST00000589054 FER1L6Q2WGJ9 1857 aa28.25■■■□□ 2.11
NEDD4L-225ENST00000589054 TNRC6CQ9HCJ0 1690 aaKnown RBP28.24■■■□□ 2.11
NEDD4L-225ENST00000589054 RGL2O15211 777 aa28.24■■■□□ 2.11
NEDD4L-225ENST00000589054 VEGFAP15692 232 aaPredicted RBP28.24■■■□□ 2.11
NEDD4L-225ENST00000589054 ERFEQ4G0M1 354 aa28.24■■■□□ 2.11
NEDD4L-225ENST00000589054 LTBP3Q9NS15 1303 aa28.23■■■□□ 2.11
NEDD4L-225ENST00000589054 TPTE2Q6XPS3 522 aa28.23■■■□□ 2.11
NEDD4L-225ENST00000589054 TIAM2Q8IVF5 1701 aa28.23■■■□□ 2.11
NEDD4L-225ENST00000589054 NEFMP07197 916 aa28.22■■■□□ 2.11
NEDD4L-225ENST00000589054 TAOK3Q9H2K8 898 aa28.22■■■□□ 2.11
NEDD4L-225ENST00000589054 NPR1P16066 1061 aa28.21■■■□□ 2.11
NEDD4L-225ENST00000589054 MYL6BP14649 208 aa28.2■■■□□ 2.1
NEDD4L-225ENST00000589054 DDX10Q13206 875 aaKnown RBP28.2■■■□□ 2.1
NEDD4L-225ENST00000589054 SMC1BQ8NDV3 1235 aa28.2■■■□□ 2.1
NEDD4L-225ENST00000589054 ABCC12Q96J65 1359 aa28.2■■■□□ 2.1
NEDD4L-225ENST00000589054 MAPK8IP3Q9UPT6 1336 aa28.19■■■□□ 2.1
NEDD4L-225ENST00000589054 WDR90Q96KV7 1748 aa28.19■■■□□ 2.1
NEDD4L-225ENST00000589054 LRP10Q7Z4F1 713 aa28.19■■■□□ 2.1
NEDD4L-225ENST00000589054 NUTM1Q86Y26 1132 aa28.19■■■□□ 2.1
NEDD4L-225ENST00000589054 LAMB4A4D0S4 1761 aa28.19■■■□□ 2.1
NEDD4L-225ENST00000589054 MAP3K15Q6ZN16 1313 aa28.18■■■□□ 2.1
NEDD4L-225ENST00000589054 ERVV-1B6SEH8 477 aa28.18■■■□□ 2.1
NEDD4L-225ENST00000589054 DDNO94850 711 aaPredicted RBP28.18■■■□□ 2.1
NEDD4L-225ENST00000589054 RIPK4P57078 832 aa28.18■■■□□ 2.1
NEDD4L-225ENST00000589054 RALBP1Q15311 655 aa28.18■■■□□ 2.1
NEDD4L-225ENST00000589054 SLC51AQ86UW1 340 aa28.18■■■□□ 2.1
NEDD4L-225ENST00000589054 UBN2Q6ZU65 1347 aa28.18■■■□□ 2.1
NEDD4L-225ENST00000589054 PDIA6Q15084 440 aa28.17■■■□□ 2.1
NEDD4L-225ENST00000589054 ZBTB3Q9H5J0 574 aa28.17■■■□□ 2.1
NEDD4L-225ENST00000589054 CACNA1SQ13698 1873 aa28.17■■■□□ 2.1
NEDD4L-225ENST00000589054 GPTP24298 496 aa28.16■■■□□ 2.1
NEDD4L-225ENST00000589054 TMPOP42166 694 aaKnown RBP28.16■■■□□ 2.1
NEDD4L-225ENST00000589054 IFFO2Q5TF58 517 aa28.16■■■□□ 2.1
NEDD4L-225ENST00000589054 DPY19L2Q6NUT2 758 aa28.16■■■□□ 2.1
NEDD4L-225ENST00000589054 KLRG1Q96E93 195 aa28.16■■■□□ 2.1
NEDD4L-225ENST00000589054 TSPYL4Q9UJ04 414 aa28.16■■■□□ 2.1
NEDD4L-225ENST00000589054 ARFGEF2Q9Y6D5 1785 aa28.15■■■□□ 2.1
NEDD4L-225ENST00000589054 POTEIP0CG38 1075 aa28.15■■■□□ 2.1
NEDD4L-225ENST00000589054 POTEJP0CG39 1038 aa28.15■■■□□ 2.1
NEDD4L-225ENST00000589054 PROSER3Q2NL68 480 aa28.15■■■□□ 2.1
NEDD4L-225ENST00000589054 PNNQ9H307 717 aaKnown RBP28.15■■■□□ 2.1
NEDD4L-225ENST00000589054 ANXA1P04083 346 aa28.14■■■□□ 2.1
NEDD4L-225ENST00000589054 CCDC93Q567U6 631 aa28.14■■■□□ 2.1
NEDD4L-225ENST00000589054 SUSD4Q5VX71 490 aa28.14■■■□□ 2.1
NEDD4L-225ENST00000589054 ZNF277Q9NRM2 450 aaPredicted RBP28.14■■■□□ 2.1
NEDD4L-225ENST00000589054 CRY2Q49AN0 593 aa28.13■■■□□ 2.09
NEDD4L-225ENST00000589054 SOGA3Q5TF21 947 aa28.13■■■□□ 2.09
NEDD4L-225ENST00000589054 CCDC146Q8IYE0 955 aa28.13■■■□□ 2.09
NEDD4L-225ENST00000589054 ZNF34Q8IZ26 560 aa28.13■■■□□ 2.09
NEDD4L-225ENST00000589054 DICER1Q9UPY3 1922 aaKnown RBP28.13■■■□□ 2.09
NEDD4L-225ENST00000589054 C3orf67Q6ZVT6 689 aa28.12■■■□□ 2.09
NEDD4L-225ENST00000589054 SNED1Q8TER0 1413 aa28.11■■■□□ 2.09
NEDD4L-225ENST00000589054 EIF2S2P20042 333 aaKnown RBP28.11■■■□□ 2.09
NEDD4L-225ENST00000589054 GTF2E1P29083 439 aaPredicted RBP28.11■■■□□ 2.09
NEDD4L-225ENST00000589054 FKBP4Q02790 459 aaKnown RBP eCLIP28.11■■■□□ 2.09
NEDD4L-225ENST00000589054 KIF6Q6ZMV9 814 aa28.11■■■□□ 2.09
NEDD4L-225ENST00000589054 KRT24Q2M2I5 525 aa28.1■■■□□ 2.09
NEDD4L-225ENST00000589054 JMYQ8N9B5 988 aa28.1■■■□□ 2.09
NEDD4L-225ENST00000589054 NUP98P52948 1817 aa28.09■■■□□ 2.09
NEDD4L-225ENST00000589054 NTSR2O95665 410 aa28.09■■■□□ 2.09
NEDD4L-225ENST00000589054 GIGYF2Q6Y7W6 1299 aaKnown RBP28.09■■■□□ 2.09
NEDD4L-225ENST00000589054 ZNF541Q9H0D2 1346 aa28.09■■■□□ 2.09
NEDD4L-225ENST00000589054 NEUROD2Q15784 382 aa28.08■■■□□ 2.09
NEDD4L-225ENST00000589054 NYXQ9GZU5 481 aa28.08■■■□□ 2.09
NEDD4L-225ENST00000589054 MYBBP1AQ9BQG0 1328 aaKnown RBP28.08■■■□□ 2.09
NEDD4L-225ENST00000589054 SYNE4Q8N205 404 aa28.07■■■□□ 2.08
NEDD4L-225ENST00000589054 NECTIN2Q92692 538 aa28.07■■■□□ 2.08
NEDD4L-225ENST00000589054 TRIM35Q9UPQ4 493 aa28.07■■■□□ 2.08
NEDD4L-225ENST00000589054 ERBB4Q15303 1308 aa28.07■■■□□ 2.08
NEDD4L-225ENST00000589054 ALDH1B1P30837 517 aa28.06■■■□□ 2.08
NEDD4L-225ENST00000589054 PCNTO95613 3336 aa28.06■■■□□ 2.08
NEDD4L-225ENST00000589054 HOXA10P31260 410 aaPredicted RBP28.05■■■□□ 2.08
NEDD4L-225ENST00000589054 RTKN2Q8IZC4 609 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms