RNA–Protein interactions for RNA: ENST00000588961.1

KDM4B-207, Transcript of lysine demethylase 4B, humanhuman

TSL 4

Gene KDM4B, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-207ENST00000588961 CLUAP1Q96AJ1 413 aa11.05□□□□□ -0.64
KDM4B-207ENST00000588961 CFAP44Q96MT7 982 aa11.05□□□□□ -0.64
KDM4B-207ENST00000588961 TEX13AQ9BXU3 409 aaPredicted RBP11.05□□□□□ -0.64
KDM4B-207ENST00000588961 MBIPQ9NS73 344 aa11.05□□□□□ -0.64
KDM4B-207ENST00000588961 BABAM1Q9NWV8 329 aa11.05□□□□□ -0.64
KDM4B-207ENST00000588961 ZBTB1Q9Y2K1 713 aa11.05□□□□□ -0.64
KDM4B-207ENST00000588961 UBR3Q6ZT12 1888 aa11.04□□□□□ -0.64
KDM4B-207ENST00000588961 PRR29P0C7W0 189 aa11.04□□□□□ -0.64
KDM4B-207ENST00000588961 ZNF853P0CG23 659 aa11.04□□□□□ -0.64
KDM4B-207ENST00000588961 MSL1Q68DK7 614 aa11.04□□□□□ -0.64
KDM4B-207ENST00000588961 FLAD1Q8NFF5 587 aa11.04□□□□□ -0.64
KDM4B-207ENST00000588961 BACH2Q9BYV9 841 aa11.04□□□□□ -0.64
KDM4B-207ENST00000588961 ZNF330Q9Y3S2 320 aaPredicted RBP11.04□□□□□ -0.64
KDM4B-207ENST00000588961 CICQ96RK0 1608 aaPredicted RBP11.04□□□□□ -0.64
KDM4B-207ENST00000588961 MYH14Q7Z406 1995 aaKnown RBP11.04□□□□□ -0.64
KDM4B-207ENST00000588961 KIF16BQ96L93 1317 aa11.04□□□□□ -0.64
KDM4B-207ENST00000588961 QSER1Q2KHR3 1735 aa11.04□□□□□ -0.64
KDM4B-207ENST00000588961 C20orf194Q5TEA3 1177 aa11.03□□□□□ -0.64
KDM4B-207ENST00000588961 PIP4P2Q8N4L2 257 aa11.03□□□□□ -0.64
KDM4B-207ENST00000588961 NECTIN2Q92692 538 aa11.03□□□□□ -0.64
KDM4B-207ENST00000588961 TSR2Q969E8 191 aaKnown RBP11.03□□□□□ -0.64
KDM4B-207ENST00000588961 MTFR1LQ9H019 292 aa11.03□□□□□ -0.64
KDM4B-207ENST00000588961 SPON1Q9HCB6 807 aa11.03□□□□□ -0.64
KDM4B-207ENST00000588961 ELL2O00472 640 aaPredicted RBP11.02□□□□□ -0.65
KDM4B-207ENST00000588961 EIF2S2P20042 333 aaKnown RBP11.02□□□□□ -0.65
KDM4B-207ENST00000588961 RFC4P35249 363 aa11.02□□□□□ -0.65
KDM4B-207ENST00000588961 FXR2P51116 673 aaKnown RBP eCLIP11.02□□□□□ -0.65
KDM4B-207ENST00000588961 POTEHQ6S545 545 aa11.02□□□□□ -0.65
KDM4B-207ENST00000588961 SLC16A10Q8TF71 515 aa11.02□□□□□ -0.65
KDM4B-207ENST00000588961 ARXQ96QS3 562 aa11.02□□□□□ -0.65
KDM4B-207ENST00000588961 RWDD1Q9H446 243 aaPredicted RBP11.02□□□□□ -0.65
KDM4B-207ENST00000588961 SRP68Q9UHB9 627 aaKnown RBP11.02□□□□□ -0.65
KDM4B-207ENST00000588961 DDX19BQ9UMR2 479 aa11.02□□□□□ -0.65
KDM4B-207ENST00000588961 SOS1Q07889 1333 aaPredicted RBP11.02□□□□□ -0.65
KDM4B-207ENST00000588961 NBPF26B4DH59 902 aa11.01□□□□□ -0.65
KDM4B-207ENST00000588961 PDE4AP27815 886 aa11.01□□□□□ -0.65
KDM4B-207ENST00000588961 ANP32AP39687 249 aaKnown RBP11.01□□□□□ -0.65
KDM4B-207ENST00000588961 PTGER2P43116 358 aa11.01□□□□□ -0.65
KDM4B-207ENST00000588961 NBPF10Q6P3W6 841 aaKnown RBP11.01□□□□□ -0.65
KDM4B-207ENST00000588961 DZIP1LQ8IYY4 767 aaKnown RBP11.01□□□□□ -0.65
KDM4B-207ENST00000588961 NBPF15Q8N660 670 aa11.01□□□□□ -0.65
KDM4B-207ENST00000588961 MYL6BP14649 208 aa11□□□□□ -0.65
KDM4B-207ENST00000588961 EIF5P55010 431 aaKnown RBP11□□□□□ -0.65
KDM4B-207ENST00000588961 EXOSC9Q06265 439 aaKnown RBP11□□□□□ -0.65
KDM4B-207ENST00000588961 MVPQ14764 893 aaKnown RBP11□□□□□ -0.65
KDM4B-207ENST00000588961 ATF7IPQ6VMQ6 1270 aa11□□□□□ -0.65
KDM4B-207ENST00000588961 C8orf58Q8NAV2 365 aa11□□□□□ -0.65
KDM4B-207ENST00000588961 CHMP4AQ9BY43 222 aa11□□□□□ -0.65
KDM4B-207ENST00000588961 TBC1D2BQ9UPU7 963 aa11□□□□□ -0.65
KDM4B-207ENST00000588961 COL15A1P39059 1388 aa11□□□□□ -0.65
KDM4B-207ENST00000588961 ZPR1O75312 459 aa10.99□□□□□ -0.65
KDM4B-207ENST00000588961 ANXA1P04083 346 aa10.99□□□□□ -0.65
KDM4B-207ENST00000588961 GYS1P13807 737 aa10.99□□□□□ -0.65
KDM4B-207ENST00000588961 IL6STP40189 918 aaPredicted RBP10.99□□□□□ -0.65
KDM4B-207ENST00000588961 HDAC1Q13547 482 aaPredicted RBP10.99□□□□□ -0.65
KDM4B-207ENST00000588961 USPL1Q5W0Q7 1092 aa10.99□□□□□ -0.65
KDM4B-207ENST00000588961 NPM2Q86SE8 214 aaKnown RBP10.99□□□□□ -0.65
KDM4B-207ENST00000588961 TSPYL6Q8N831 410 aa10.99□□□□□ -0.65
KDM4B-207ENST00000588961 SGIP1Q9BQI5 828 aa10.99□□□□□ -0.65
KDM4B-207ENST00000588961 PPP1R1BQ9UD71 204 aaPredicted RBP10.99□□□□□ -0.65
KDM4B-207ENST00000588961 VAMP4O75379 141 aa10.98□□□□□ -0.65
KDM4B-207ENST00000588961 POLD1P28340 1107 aa10.98□□□□□ -0.65
KDM4B-207ENST00000588961 IPO9Q96P70 1041 aaKnown RBP10.98□□□□□ -0.65
KDM4B-207ENST00000588961 NARFQ9UHQ1 456 aa10.98□□□□□ -0.65
KDM4B-207ENST00000588961 USP42Q9H9J4 1324 aaKnown RBP10.98□□□□□ -0.65
KDM4B-207ENST00000588961 C4AP0C0L4 1744 aa10.98□□□□□ -0.65
KDM4B-207ENST00000588961 LAMB4A4D0S4 1761 aa10.98□□□□□ -0.65
KDM4B-207ENST00000588961 A0A087WZG4 1122 aa10.97□□□□□ -0.65
KDM4B-207ENST00000588961 PDIA6Q15084 440 aa10.97□□□□□ -0.65
KDM4B-207ENST00000588961 PROSER3Q2NL68 480 aa10.97□□□□□ -0.65
KDM4B-207ENST00000588961 FAM161AQ3B820 660 aa10.97□□□□□ -0.65
KDM4B-207ENST00000588961 HDGFL1Q5TGJ6 251 aa10.97□□□□□ -0.65
KDM4B-207ENST00000588961 DZIP3Q86Y13 1208 aaKnown RBP10.97□□□□□ -0.65
KDM4B-207ENST00000588961 FTSJ3Q8IY81 847 aaKnown RBP10.97□□□□□ -0.65
KDM4B-207ENST00000588961 SSH1Q8WYL5 1049 aa10.97□□□□□ -0.65
KDM4B-207ENST00000588961 BCL2L12Q9HB09 334 aa10.97□□□□□ -0.65
KDM4B-207ENST00000588961 SMC4Q9NTJ3 1288 aa10.97□□□□□ -0.65
KDM4B-207ENST00000588961 LRP5O75197 1615 aa10.96□□□□□ -0.65
KDM4B-207ENST00000588961 EIF5BO60841 1220 aaKnown RBP10.96□□□□□ -0.65
KDM4B-207ENST00000588961 KLHL34Q8N239 644 aa10.96□□□□□ -0.65
KDM4B-207ENST00000588961 NLGN1Q8N2Q7 840 aa10.96□□□□□ -0.65
KDM4B-207ENST00000588961 FRAT1Q92837 279 aaPredicted RBP10.96□□□□□ -0.65
KDM4B-207ENST00000588961 DDRGK1Q96HY6 314 aa10.96□□□□□ -0.65
KDM4B-207ENST00000588961 ANP32EQ9BTT0 268 aa10.96□□□□□ -0.65
KDM4B-207ENST00000588961 CHPF2Q9P2E5 772 aa10.96□□□□□ -0.65
KDM4B-207ENST00000588961 COG6Q9Y2V7 657 aa10.96□□□□□ -0.65
KDM4B-207ENST00000588961 CAMTA2O94983 1202 aa10.95□□□□□ -0.66
KDM4B-207ENST00000588961 MMP10P09238 476 aa10.95□□□□□ -0.66
KDM4B-207ENST00000588961 HOXB7P09629 217 aa10.95□□□□□ -0.66
KDM4B-207ENST00000588961 AIMP1Q12904 312 aaKnown RBP10.95□□□□□ -0.66
KDM4B-207ENST00000588961 TWISTNBQ3B726 338 aaPredicted RBP10.95□□□□□ -0.66
KDM4B-207ENST00000588961 BICDL1Q6ZP65 573 aa10.95□□□□□ -0.66
KDM4B-207ENST00000588961 TTLL7Q6ZT98 887 aa10.95□□□□□ -0.66
KDM4B-207ENST00000588961 PANK1Q8TE04 598 aa10.95□□□□□ -0.66
KDM4B-207ENST00000588961 API5Q9BZZ5 524 aaKnown RBP10.95□□□□□ -0.66
KDM4B-207ENST00000588961 ERBB4Q15303 1308 aa10.94□□□□□ -0.66
KDM4B-207ENST00000588961 PRKAR2AP13861 404 aaKnown RBP10.94□□□□□ -0.66
KDM4B-207ENST00000588961 TRIM27P14373 513 aa10.94□□□□□ -0.66
KDM4B-207ENST00000588961 HLFQ16534 295 aa10.94□□□□□ -0.66
KDM4B-207ENST00000588961 TBC1D9BQ66K14 1250 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms