RNA–Protein interactions for RNA: ENST00000588680.1

NFIX-211, Transcript of nuclear factor I X, humanhuman

TSL 5

Gene NFIX, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-211ENST00000588680 RASSF10A6NK89 507 aa10.56□□□□□ -0.72
NFIX-211ENST00000588680 NPHP1O15259 732 aa10.56□□□□□ -0.72
NFIX-211ENST00000588680 STARD3NLO95772 234 aa10.56□□□□□ -0.72
NFIX-211ENST00000588680 SRGNP10124 158 aa10.56□□□□□ -0.72
NFIX-211ENST00000588680 ST5P78524 1137 aa10.56□□□□□ -0.72
NFIX-211ENST00000588680 HACL1Q9UJ83 578 aa10.56□□□□□ -0.72
NFIX-211ENST00000588680 TBC1D2BQ9UPU7 963 aa10.56□□□□□ -0.72
NFIX-211ENST00000588680 RNF123Q5XPI4 1314 aa10.56□□□□□ -0.72
NFIX-211ENST00000588680 HEG1Q9ULI3 1381 aa10.55□□□□□ -0.72
NFIX-211ENST00000588680 HMOX1P09601 288 aa10.55□□□□□ -0.72
NFIX-211ENST00000588680 EPHX2P34913 555 aa10.55□□□□□ -0.72
NFIX-211ENST00000588680 MLLT1Q03111 559 aaPredicted RBP10.55□□□□□ -0.72
NFIX-211ENST00000588680 CCDC93Q567U6 631 aa10.55□□□□□ -0.72
NFIX-211ENST00000588680 MAP1SQ66K74 1059 aaPredicted RBP10.55□□□□□ -0.72
NFIX-211ENST00000588680 TTC5Q8N0Z6 440 aa10.55□□□□□ -0.72
NFIX-211ENST00000588680 MASTLQ96GX5 879 aa10.55□□□□□ -0.72
NFIX-211ENST00000588680 PANK3Q9H999 370 aa10.55□□□□□ -0.72
NFIX-211ENST00000588680 ZNF277Q9NRM2 450 aaPredicted RBP10.55□□□□□ -0.72
NFIX-211ENST00000588680 ABT1Q9ULW3 272 aaKnown RBP10.55□□□□□ -0.72
NFIX-211ENST00000588680 CLEC11AQ9Y240 323 aa10.55□□□□□ -0.72
NFIX-211ENST00000588680 WDR33Q9C0J8 1336 aaKnown RBP10.55□□□□□ -0.72
NFIX-211ENST00000588680 COL4A5P29400 1685 aa10.54□□□□□ -0.72
NFIX-211ENST00000588680 CCDC85CA6NKD9 419 aa10.54□□□□□ -0.72
NFIX-211ENST00000588680 CAMTA2O94983 1202 aa10.54□□□□□ -0.72
NFIX-211ENST00000588680 MAP2K1Q02750 393 aaPredicted RBP10.54□□□□□ -0.72
NFIX-211ENST00000588680 MTHFSDQ2M296 383 aaKnown RBP10.54□□□□□ -0.72
NFIX-211ENST00000588680 DEFB115Q30KQ5 88 aa10.54□□□□□ -0.72
NFIX-211ENST00000588680 C7orf43Q8WVR3 580 aa10.54□□□□□ -0.72
NFIX-211ENST00000588680 ZNF496Q96IT1 587 aaPredicted RBP10.54□□□□□ -0.72
NFIX-211ENST00000588680 SETDB2Q96T68 719 aa10.54□□□□□ -0.72
NFIX-211ENST00000588680 FKBP4Q02790 459 aaKnown RBP eCLIP10.53□□□□□ -0.72
NFIX-211ENST00000588680 OLFM4Q6UX06 510 aa10.53□□□□□ -0.72
NFIX-211ENST00000588680 CNTROBQ8N137 903 aa10.53□□□□□ -0.72
NFIX-211ENST00000588680 IL6STP40189 918 aaPredicted RBP10.52□□□□□ -0.73
NFIX-211ENST00000588680 PAXIP1Q6ZW49 1069 aaPredicted RBP10.52□□□□□ -0.73
NFIX-211ENST00000588680 PNMA8AQ86V59 439 aaPredicted RBP10.52□□□□□ -0.73
NFIX-211ENST00000588680 LAMB4A4D0S4 1761 aa10.52□□□□□ -0.73
NFIX-211ENST00000588680 SNED1Q8TER0 1413 aa10.51□□□□□ -0.73
NFIX-211ENST00000588680 A1BGP04217 495 aa10.51□□□□□ -0.73
NFIX-211ENST00000588680 NPR1P16066 1061 aa10.51□□□□□ -0.73
NFIX-211ENST00000588680 GRM1Q13255 1194 aa10.51□□□□□ -0.73
NFIX-211ENST00000588680 ZNF790Q6PG37 636 aa10.51□□□□□ -0.73
NFIX-211ENST00000588680 NBPF5PQ86XG9 351 aaPredicted RBP10.51□□□□□ -0.73
NFIX-211ENST00000588680 CAPNS2Q96L46 248 aa10.51□□□□□ -0.73
NFIX-211ENST00000588680 DDX21Q9NR30 783 aaKnown RBP eCLIP10.51□□□□□ -0.73
NFIX-211ENST00000588680 PCDH10Q9P2E7 1040 aa10.51□□□□□ -0.73
NFIX-211ENST00000588680 TSKSQ9UJT2 592 aa10.51□□□□□ -0.73
NFIX-211ENST00000588680 NUP98P52948 1817 aa10.51□□□□□ -0.73
NFIX-211ENST00000588680 FZD9O00144 591 aa10.5□□□□□ -0.73
NFIX-211ENST00000588680 IARSP41252 1262 aaKnown RBP10.5□□□□□ -0.73
NFIX-211ENST00000588680 RGS19P49795 217 aa10.5□□□□□ -0.73
NFIX-211ENST00000588680 FMR1Q06787 632 aaKnown RBP eCLIP10.5□□□□□ -0.73
NFIX-211ENST00000588680 CYP4F22Q6NT55 531 aa10.5□□□□□ -0.73
NFIX-211ENST00000588680 NPM2Q86SE8 214 aaKnown RBP10.5□□□□□ -0.73
NFIX-211ENST00000588680 DZIP3Q86Y13 1208 aaKnown RBP10.5□□□□□ -0.73
NFIX-211ENST00000588680 GPC2Q8N158 579 aa10.5□□□□□ -0.73
NFIX-211ENST00000588680 BEGAINQ9BUH8 593 aa10.5□□□□□ -0.73
NFIX-211ENST00000588680 TEX13AQ9BXU3 409 aaPredicted RBP10.5□□□□□ -0.73
NFIX-211ENST00000588680 COL3A1P02461 1466 aaPredicted RBP10.49□□□□□ -0.73
NFIX-211ENST00000588680 PIP4K2AP48426 406 aaPredicted RBP10.49□□□□□ -0.73
NFIX-211ENST00000588680 TEFQ10587 303 aa10.49□□□□□ -0.73
NFIX-211ENST00000588680 RTKN2Q8IZC4 609 aa10.49□□□□□ -0.73
NFIX-211ENST00000588680 CFAP44Q96MT7 982 aa10.49□□□□□ -0.73
NFIX-211ENST00000588680 FMNL2Q96PY5 1086 aa10.49□□□□□ -0.73
NFIX-211ENST00000588680 ECE1P42892 770 aa10.48□□□□□ -0.73
NFIX-211ENST00000588680 SYNE4Q8N205 404 aa10.48□□□□□ -0.73
NFIX-211ENST00000588680 KNSTRNQ9Y448 316 aa10.48□□□□□ -0.73
NFIX-211ENST00000588680 GJA3Q9Y6H8 435 aa10.48□□□□□ -0.73
NFIX-211ENST00000588680 KLRG2A4D1S0 409 aaPredicted RBP10.47□□□□□ -0.73
NFIX-211ENST00000588680 TRAF5O00463 557 aa10.47□□□□□ -0.73
NFIX-211ENST00000588680 KCNQ3O43525 872 aa10.47□□□□□ -0.73
NFIX-211ENST00000588680 HSPA5P11021 654 aaKnown RBP10.47□□□□□ -0.73
NFIX-211ENST00000588680 LMOD1P29536 600 aaPredicted RBP10.47□□□□□ -0.73
NFIX-211ENST00000588680 AMER1Q5JTC6 1135 aaPredicted RBP10.47□□□□□ -0.73
NFIX-211ENST00000588680 IL17REQ8NFR9 667 aa10.47□□□□□ -0.73
NFIX-211ENST00000588680 GPR101Q96P66 508 aaPredicted RBP10.47□□□□□ -0.73
NFIX-211ENST00000588680 MCOLN1Q9GZU1 580 aa10.47□□□□□ -0.73
NFIX-211ENST00000588680 ZNF652Q9Y2D9 606 aa10.47□□□□□ -0.73
NFIX-211ENST00000588680 ABCC12Q96J65 1359 aa10.47□□□□□ -0.73
NFIX-211ENST00000588680 FAM177BA6PVY3 158 aa10.46□□□□□ -0.73
NFIX-211ENST00000588680 GNAT3A8MTJ3 354 aa10.46□□□□□ -0.73
NFIX-211ENST00000588680 DIAPH1O60610 1272 aaKnown RBP10.46□□□□□ -0.73
NFIX-211ENST00000588680 AOC2O75106 756 aa10.46□□□□□ -0.73
NFIX-211ENST00000588680 EPS15P42566 896 aa10.46□□□□□ -0.73
NFIX-211ENST00000588680 SCNN1DP51172 638 aa10.46□□□□□ -0.73
NFIX-211ENST00000588680 CLEC4GQ6UXB4 293 aa10.46□□□□□ -0.73
NFIX-211ENST00000588680 JDP2Q8WYK2 163 aa10.46□□□□□ -0.73
NFIX-211ENST00000588680 NIP7Q9Y221 180 aaKnown RBP eCLIP10.46□□□□□ -0.73
NFIX-211ENST00000588680 TLL2Q9Y6L7 1015 aa10.46□□□□□ -0.73
NFIX-211ENST00000588680 CEMIPQ8WUJ3 1361 aa10.46□□□□□ -0.74
NFIX-211ENST00000588680 AKAP11Q9UKA4 1901 aa10.46□□□□□ -0.74
NFIX-211ENST00000588680 PRAMEF22A3QJZ6 481 aa10.45□□□□□ -0.74
NFIX-211ENST00000588680 EIF6P56537 245 aaKnown RBP10.45□□□□□ -0.74
NFIX-211ENST00000588680 EIF4G2P78344 907 aaKnown RBP eCLIP10.45□□□□□ -0.74
NFIX-211ENST00000588680 CST9Q5W186 159 aa10.45□□□□□ -0.74
NFIX-211ENST00000588680 SLC51AQ86UW1 340 aa10.45□□□□□ -0.74
NFIX-211ENST00000588680 GAS2L2Q8NHY3 880 aa10.45□□□□□ -0.74
NFIX-211ENST00000588680 PSMD1Q99460 953 aa10.45□□□□□ -0.74
NFIX-211ENST00000588680 POLR2AP24928 1970 aaKnown RBP10.45□□□□□ -0.74
NFIX-211ENST00000588680 LAMB2P55268 1798 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms