RNA–Protein interactions for RNA: ENST00000588552.5

PTPRS-206, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

TSL 1 (best)

Gene PTPRS, Length 5,443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-206ENST00000588552 MAGI3Q5TCQ9 1506 aa18.2■□□□□ 0.5
PTPRS-206ENST00000588552 NUCB1Q02818 461 aa18.2■□□□□ 0.5
PTPRS-206ENST00000588552 SERPINC1P01008 464 aa18.2■□□□□ 0.5
PTPRS-206ENST00000588552 SEC63Q9UGP8 760 aaKnown RBP18.2■□□□□ 0.5
PTPRS-206ENST00000588552 SMARCE1Q969G3 411 aa18.19■□□□□ 0.5
PTPRS-206ENST00000588552 EDC4Q6P2E9 1401 aaKnown RBP18.19■□□□□ 0.5
PTPRS-206ENST00000588552 ZNF76P36508 570 aa18.19■□□□□ 0.5
PTPRS-206ENST00000588552 TSPYL6Q8N831 410 aa18.19■□□□□ 0.5
PTPRS-206ENST00000588552 MNS1Q8NEH6 495 aa18.19■□□□□ 0.5
PTPRS-206ENST00000588552 ZFYVE16Q7Z3T8 1539 aa18.19■□□□□ 0.5
PTPRS-206ENST00000588552 PLEKHH1Q9ULM0 1364 aa18.19■□□□□ 0.5
PTPRS-206ENST00000588552 ST5P78524 1137 aa18.19■□□□□ 0.5
PTPRS-206ENST00000588552 CTCFLQ8NI51 663 aaPredicted RBP18.19■□□□□ 0.5
PTPRS-206ENST00000588552 VAMP4O75379 141 aa18.19■□□□□ 0.5
PTPRS-206ENST00000588552 ANKRD44Q8N8A2 993 aa18.19■□□□□ 0.5
PTPRS-206ENST00000588552 SLC12A7Q9Y666 1083 aa18.19■□□□□ 0.5
PTPRS-206ENST00000588552 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.19■□□□□ 0.5
PTPRS-206ENST00000588552 LMTK3Q96Q04 1460 aa18.18■□□□□ 0.5
PTPRS-206ENST00000588552 LIMCH1Q9UPQ0 1083 aa18.18■□□□□ 0.5
PTPRS-206ENST00000588552 PCDHB15Q9Y5E8 787 aa18.18■□□□□ 0.5
PTPRS-206ENST00000588552 ORAI2Q96SN7 254 aa18.18■□□□□ 0.5
PTPRS-206ENST00000588552 SETDB2Q96T68 719 aa18.18■□□□□ 0.5
PTPRS-206ENST00000588552 NUP62CLQ9H1M0 184 aa18.18■□□□□ 0.5
PTPRS-206ENST00000588552 ODF2Q5BJF6 829 aa18.18■□□□□ 0.5
PTPRS-206ENST00000588552 CEP131Q9UPN4 1083 aa18.18■□□□□ 0.5
PTPRS-206ENST00000588552 LMBR1LQ6UX01 489 aa18.18■□□□□ 0.5
PTPRS-206ENST00000588552 ATP8B2P98198 1209 aa18.17■□□□□ 0.5
PTPRS-206ENST00000588552 IFIT3O14879 490 aaKnown RBP18.17■□□□□ 0.5
PTPRS-206ENST00000588552 RNMTO43148 476 aaKnown RBP18.17■□□□□ 0.5
PTPRS-206ENST00000588552 SSBP05455 408 aaKnown RBP eCLIP18.17■□□□□ 0.5
PTPRS-206ENST00000588552 UQCRFS1P1P0C7P4 283 aa18.17■□□□□ 0.5
PTPRS-206ENST00000588552 KRT24Q2M2I5 525 aa18.17■□□□□ 0.5
PTPRS-206ENST00000588552 SIRT1Q96EB6 747 aa18.17■□□□□ 0.5
PTPRS-206ENST00000588552 PCDH11XQ9BZA7 1347 aa18.17■□□□□ 0.5
PTPRS-206ENST00000588552 PCDH11YQ9BZA8 1340 aa18.17■□□□□ 0.5
PTPRS-206ENST00000588552 LDHCP07864 332 aa18.17■□□□□ 0.5
PTPRS-206ENST00000588552 CNKSR2Q8WXI2 1034 aa18.17■□□□□ 0.5
PTPRS-206ENST00000588552 BMP2KQ9NSY1 1161 aaPredicted RBP18.17■□□□□ 0.5
PTPRS-206ENST00000588552 TTLL5Q6EMB2 1281 aa18.16■□□□□ 0.5
PTPRS-206ENST00000588552 ZNF622Q969S3 477 aaKnown RBP eCLIP18.16■□□□□ 0.52e-7■■□□□ 13.5
PTPRS-206ENST00000588552 TMEM2Q9UHN6 1383 aa18.16■□□□□ 0.5
PTPRS-206ENST00000588552 ANKRD18AQ8IVF6 992 aa18.16■□□□□ 0.5
PTPRS-206ENST00000588552 SPC24Q8NBT2 197 aa18.16■□□□□ 0.5
PTPRS-206ENST00000588552 LINS1Q8NG48 757 aa18.16■□□□□ 0.5
PTPRS-206ENST00000588552 C8orf76Q96K31 380 aa18.16■□□□□ 0.5
PTPRS-206ENST00000588552 BTG4Q9NY30 223 aa18.16■□□□□ 0.5
PTPRS-206ENST00000588552 CCDC173Q0VFZ6 552 aa18.16■□□□□ 0.5
PTPRS-206ENST00000588552 CCDC82Q8N4S0 544 aa18.16■□□□□ 0.5
PTPRS-206ENST00000588552 NIP7Q9Y221 180 aaKnown RBP eCLIP18.16■□□□□ 0.51e-6■□□□□ 10.1
PTPRS-206ENST00000588552 WWC2Q6AWC2 1192 aa18.15■□□□□ 0.5
PTPRS-206ENST00000588552 CEP57L1Q8IYX8 460 aa18.15■□□□□ 0.5
PTPRS-206ENST00000588552 SBNO1A3KN83 1393 aa18.15■□□□□ 0.5
PTPRS-206ENST00000588552 ARHGEF5Q12774 1597 aa18.15■□□□□ 0.5
PTPRS-206ENST00000588552 SPTY2D1Q68D10 685 aaPredicted RBP18.15■□□□□ 0.5
PTPRS-206ENST00000588552 GOLGA8BA8MQT2 603 aa18.15■□□□□ 0.5
PTPRS-206ENST00000588552 DZIP3Q86Y13 1208 aaKnown RBP18.15■□□□□ 0.5
PTPRS-206ENST00000588552 HMGN5P82970 282 aaKnown RBP18.14■□□□□ 0.49
PTPRS-206ENST00000588552 GOLGA8AA7E2F4 631 aa18.14■□□□□ 0.49
PTPRS-206ENST00000588552 BAG3O95817 575 aa18.14■□□□□ 0.49
PTPRS-206ENST00000588552 IL13P35225 146 aa18.14■□□□□ 0.49
PTPRS-206ENST00000588552 ATP2B3Q16720 1220 aa18.14■□□□□ 0.49
PTPRS-206ENST00000588552 ZFYVE27Q5T4F4 411 aa18.14■□□□□ 0.49
PTPRS-206ENST00000588552 NLRP3Q96P20 1036 aa18.14■□□□□ 0.49
PTPRS-206ENST00000588552 CFAP74Q9C0B2 1584 aa18.13■□□□□ 0.49
PTPRS-206ENST00000588552 LARP6Q9BRS8 491 aaKnown RBP18.13■□□□□ 0.49
PTPRS-206ENST00000588552 UTP14AQ9BVJ6 771 aaKnown RBP18.13■□□□□ 0.49
PTPRS-206ENST00000588552 ADGBQ8N7X0 1667 aa18.13■□□□□ 0.49
PTPRS-206ENST00000588552 MYO5CQ9NQX4 1742 aa18.13■□□□□ 0.49
PTPRS-206ENST00000588552 IL15P40933 162 aaPredicted RBP18.13■□□□□ 0.49
PTPRS-206ENST00000588552 PDE1AP54750 535 aa18.13■□□□□ 0.49
PTPRS-206ENST00000588552 NPC1L1Q9UHC9 1359 aa18.13■□□□□ 0.49
PTPRS-206ENST00000588552 SDSP20132 328 aa18.13■□□□□ 0.49
PTPRS-206ENST00000588552 HAND2P61296 217 aa18.13■□□□□ 0.49
PTPRS-206ENST00000588552 CCT2P78371 535 aaKnown RBP18.13■□□□□ 0.49
PTPRS-206ENST00000588552 CCDC96Q2M329 555 aa18.13■□□□□ 0.49
PTPRS-206ENST00000588552 TBC1D2Q9BYX2 928 aa18.13■□□□□ 0.49
PTPRS-206ENST00000588552 CATIPQ7Z7H3 387 aa18.13■□□□□ 0.49
PTPRS-206ENST00000588552 ZNHIT6Q9NWK9 470 aaKnown RBP18.13■□□□□ 0.49
PTPRS-206ENST00000588552 GUCY1B3Q02153 619 aa18.12■□□□□ 0.49
PTPRS-206ENST00000588552 TNNQ9UQP3 1299 aa18.12■□□□□ 0.49
PTPRS-206ENST00000588552 YEATS2Q9ULM3 1422 aa18.12■□□□□ 0.49
PTPRS-206ENST00000588552 SSRP1Q08945 709 aaKnown RBP18.12■□□□□ 0.49
PTPRS-206ENST00000588552 TANGO6Q9C0B7 1094 aa18.12■□□□□ 0.49
PTPRS-206ENST00000588552 ABCA8O94911 1581 aa18.12■□□□□ 0.49
PTPRS-206ENST00000588552 CWF19L2Q2TBE0 894 aaKnown RBP18.12■□□□□ 0.49
PTPRS-206ENST00000588552 PPFIBP1Q86W92 1011 aa18.12■□□□□ 0.49
PTPRS-206ENST00000588552 HMG20BQ9P0W2 317 aa18.12■□□□□ 0.49
PTPRS-206ENST00000588552 SCAND2PQ9GZW5 306 aaPredicted RBP18.12■□□□□ 0.49
PTPRS-206ENST00000588552 CCP110O43303 1012 aa18.11■□□□□ 0.49
PTPRS-206ENST00000588552 SYCP1Q15431 976 aa18.11■□□□□ 0.49
PTPRS-206ENST00000588552 NEK1Q96PY6 1258 aa18.11■□□□□ 0.49
PTPRS-206ENST00000588552 CAGE1Q8TC20 777 aa18.11■□□□□ 0.49
PTPRS-206ENST00000588552 HSP90AA2PQ14568 343 aaPredicted RBP18.11■□□□□ 0.49
PTPRS-206ENST00000588552 MFSD6Q6ZSS7 791 aa18.11■□□□□ 0.49
PTPRS-206ENST00000588552 GRPEL1Q9HAV7 217 aa18.11■□□□□ 0.49
PTPRS-206ENST00000588552 PA2G4Q9UQ80 394 aaKnown RBP18.1■□□□□ 0.49
PTPRS-206ENST00000588552 PDE4BQ07343 736 aa18.1■□□□□ 0.49
PTPRS-206ENST00000588552 MAP3K11Q16584 847 aa18.1■□□□□ 0.49
PTPRS-206ENST00000588552 TMEM67Q5HYA8 995 aa18.1■□□□□ 0.49
PTPRS-206ENST00000588552 ARGLU1Q9NWB6 273 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms