RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 GJA3Q9Y6H8 435 aa10.13□□□□□ -0.79
TPM4-210ENST00000588507 UNC80Q8N2C7 3258 aa10.13□□□□□ -0.79
TPM4-210ENST00000588507 PDE6BP35913 854 aa10.12□□□□□ -0.79
TPM4-210ENST00000588507 ZNF157P51786 506 aaPredicted RBP10.12□□□□□ -0.79
TPM4-210ENST00000588507 NME9Q86XW9 330 aa10.12□□□□□ -0.79
TPM4-210ENST00000588507 DEFB123Q8N688 67 aa10.12□□□□□ -0.79
TPM4-210ENST00000588507 USHBP1Q8N6Y0 703 aa10.12□□□□□ -0.79
TPM4-210ENST00000588507 NRXN2Q9P2S2 1712 aa10.12□□□□□ -0.79
TPM4-210ENST00000588507 RGPD2P0DJD1 1756 aa10.11□□□□□ -0.79
TPM4-210ENST00000588507 RBBP6Q7Z6E9 1792 aaKnown RBP10.11□□□□□ -0.79
TPM4-210ENST00000588507 A0A1W2PPC1 479 aa10.11□□□□□ -0.79
TPM4-210ENST00000588507 SCNN1DP51172 638 aa10.11□□□□□ -0.79
TPM4-210ENST00000588507 FKBP4Q02790 459 aaKnown RBP eCLIP10.11□□□□□ -0.79
TPM4-210ENST00000588507 GPR153Q6NV75 609 aa10.11□□□□□ -0.79
TPM4-210ENST00000588507 DCAF11Q8TEB1 546 aa10.11□□□□□ -0.79
TPM4-210ENST00000588507 MPHOSPH9Q99550 1183 aa10.11□□□□□ -0.79
TPM4-210ENST00000588507 MYH14Q7Z406 1995 aaKnown RBP10.11□□□□□ -0.79
TPM4-210ENST00000588507 CARMIL3Q8ND23 1372 aa10.11□□□□□ -0.79
TPM4-210ENST00000588507 RANBP2P49792 3224 aaKnown RBP10.1□□□□□ -0.79
TPM4-210ENST00000588507 GPR25O00155 361 aa10.1□□□□□ -0.79
TPM4-210ENST00000588507 TBC1D8O95759 1140 aa10.1□□□□□ -0.79
TPM4-210ENST00000588507 HOXC9P31274 260 aa10.1□□□□□ -0.79
TPM4-210ENST00000588507 EIF6P56537 245 aaKnown RBP10.1□□□□□ -0.79
TPM4-210ENST00000588507 CCDC93Q567U6 631 aa10.1□□□□□ -0.79
TPM4-210ENST00000588507 PRPF40BQ6NWY9 871 aaKnown RBP10.1□□□□□ -0.79
TPM4-210ENST00000588507 STAC3Q96MF2 364 aa10.1□□□□□ -0.79
TPM4-210ENST00000588507 BRIP1Q9BX63 1249 aa10.1□□□□□ -0.79
TPM4-210ENST00000588507 TTC28Q96AY4 2481 aa10.1□□□□□ -0.79
TPM4-210ENST00000588507 CENPJQ9HC77 1338 aaPredicted RBP10.09□□□□□ -0.79
TPM4-210ENST00000588507 IARSP41252 1262 aaKnown RBP10.09□□□□□ -0.79
TPM4-210ENST00000588507 CRKLP46109 303 aaKnown RBP10.09□□□□□ -0.79
TPM4-210ENST00000588507 AMPHP49418 695 aa10.09□□□□□ -0.79
TPM4-210ENST00000588507 NOM1Q5C9Z4 860 aaKnown RBP10.09□□□□□ -0.79
TPM4-210ENST00000588507 CDC37L1Q7L3B6 337 aa10.09□□□□□ -0.79
TPM4-210ENST00000588507 JDP2Q8WYK2 163 aa10.09□□□□□ -0.79
TPM4-210ENST00000588507 TMEM106CQ9BVX2 250 aa10.09□□□□□ -0.79
TPM4-210ENST00000588507 COL5A3P25940 1745 aaPredicted RBP10.09□□□□□ -0.79
TPM4-210ENST00000588507 ZNF831Q5JPB2 1677 aa10.09□□□□□ -0.79
TPM4-210ENST00000588507 SLX4Q8IY92 1834 aa10.08□□□□□ -0.8
TPM4-210ENST00000588507 SLC10A3P09131 477 aa10.08□□□□□ -0.8
TPM4-210ENST00000588507 STYK1Q6J9G0 422 aa10.08□□□□□ -0.8
TPM4-210ENST00000588507 ADARB2Q9NS39 739 aaKnown RBP10.08□□□□□ -0.8
TPM4-210ENST00000588507 PGAP2Q9UHJ9 254 aa10.08□□□□□ -0.8
TPM4-210ENST00000588507 FKTNO75072 461 aa10.07□□□□□ -0.8
TPM4-210ENST00000588507 C2orf69Q8N8R5 385 aa10.07□□□□□ -0.8
TPM4-210ENST00000588507 C7orf43Q8WVR3 580 aa10.07□□□□□ -0.8
TPM4-210ENST00000588507 DPF3Q92784 378 aa10.07□□□□□ -0.8
TPM4-210ENST00000588507 MTMR10Q9NXD2 777 aa10.07□□□□□ -0.8
TPM4-210ENST00000588507 Q7L0L9 218 aa10.06□□□□□ -0.8
TPM4-210ENST00000588507 RTKN2Q8IZC4 609 aa10.06□□□□□ -0.8
TPM4-210ENST00000588507 GBA2Q9HCG7 927 aaPredicted RBP10.06□□□□□ -0.8
TPM4-210ENST00000588507 EVC2Q86UK5 1308 aa10.06□□□□□ -0.8
TPM4-210ENST00000588507 SYNGAP1Q96PV0 1343 aa10.06□□□□□ -0.8
TPM4-210ENST00000588507 SPTBN5Q9NRC6 3674 aaKnown RBP10.05□□□□□ -0.8
TPM4-210ENST00000588507 ZC3H15Q8WU90 426 aaKnown RBP10.05□□□□□ -0.8
TPM4-210ENST00000588507 SYMPKQ92797 1274 aaKnown RBP10.05□□□□□ -0.8
TPM4-210ENST00000588507 ARMC5Q96C12 935 aa10.05□□□□□ -0.8
TPM4-210ENST00000588507 MASTLQ96GX5 879 aa10.05□□□□□ -0.8
TPM4-210ENST00000588507 NARFQ9UHQ1 456 aa10.05□□□□□ -0.8
TPM4-210ENST00000588507 TRIM17Q9Y577 477 aa10.05□□□□□ -0.8
TPM4-210ENST00000588507 LAMB4A4D0S4 1761 aa10.05□□□□□ -0.8
TPM4-210ENST00000588507 VCANP13611 3396 aa10.05□□□□□ -0.8
TPM4-210ENST00000588507 BRCA2P51587 3418 aa10.04□□□□□ -0.8
TPM4-210ENST00000588507 TMEM265A0A087WTH1 108 aa10.04□□□□□ -0.8
TPM4-210ENST00000588507 SPG7Q9UQ90 795 aa10.04□□□□□ -0.8
TPM4-210ENST00000588507 PIEZO1Q92508 2521 aa10.03□□□□□ -0.8
TPM4-210ENST00000588507 PPEF1O14829 653 aaPredicted RBP10.03□□□□□ -0.8
TPM4-210ENST00000588507 SRGNP10124 158 aa10.03□□□□□ -0.8
TPM4-210ENST00000588507 MAP3K12Q12852 859 aa10.03□□□□□ -0.8
TPM4-210ENST00000588507 MON2Q7Z3U7 1717 aa10.03□□□□□ -0.8
TPM4-210ENST00000588507 USP48Q86UV5 1035 aa10.03□□□□□ -0.8
TPM4-210ENST00000588507 ANKRD31Q8N7Z5 1873 aa10.03□□□□□ -0.8
TPM4-210ENST00000588507 GPRC5DQ9NZD1 345 aa10.03□□□□□ -0.8
TPM4-210ENST00000588507 CACNA1SQ13698 1873 aa10.02□□□□□ -0.8
TPM4-210ENST00000588507 COL11A2P13942 1736 aaPredicted RBP10.02□□□□□ -0.8
TPM4-210ENST00000588507 INTS5Q6P9B9 1019 aaKnown RBP10.02□□□□□ -0.81
TPM4-210ENST00000588507 OTOP1Q7RTM1 612 aa10.02□□□□□ -0.81
TPM4-210ENST00000588507 BCL2L12Q9HB09 334 aa10.02□□□□□ -0.81
TPM4-210ENST00000588507 BCORQ6W2J9 1755 aa10.01□□□□□ -0.81
TPM4-210ENST00000588507 TNFRSF10AO00220 468 aa10.01□□□□□ -0.81
TPM4-210ENST00000588507 PRR5LQ6MZQ0 368 aa10.01□□□□□ -0.81
TPM4-210ENST00000588507 PTPN22Q9Y2R2 807 aa10.01□□□□□ -0.81
TPM4-210ENST00000588507 NR2E3Q9Y5X4 410 aa10.01□□□□□ -0.81
TPM4-210ENST00000588507 SBNO2Q9Y2G9 1366 aa10.01□□□□□ -0.81
TPM4-210ENST00000588507 PTCD1O75127 700 aaKnown RBP10□□□□□ -0.81
TPM4-210ENST00000588507 SLC4A8Q2Y0W8 1093 aa10□□□□□ -0.81
TPM4-210ENST00000588507 RASAL3Q86YV0 1011 aa10□□□□□ -0.81
TPM4-210ENST00000588507 IFNL2Q8IZJ0 200 aa10□□□□□ -0.81
TPM4-210ENST00000588507 ARFGEF2Q9Y6D5 1785 aa10□□□□□ -0.81
TPM4-210ENST00000588507 SOS1Q07889 1333 aaPredicted RBP10□□□□□ -0.81
TPM4-210ENST00000588507 RPTORQ8N122 1335 aa10□□□□□ -0.81
TPM4-210ENST00000588507 HIRAP54198 1017 aaPredicted RBP9.99□□□□□ -0.81
TPM4-210ENST00000588507 OLFM4Q6UX06 510 aa9.99□□□□□ -0.81
TPM4-210ENST00000588507 DLK2Q6UY11 383 aa9.99□□□□□ -0.81
TPM4-210ENST00000588507 ARIH1Q9Y4X5 557 aaPredicted RBP9.99□□□□□ -0.81
TPM4-210ENST00000588507 ERVV-2B6SEH9 535 aa9.98□□□□□ -0.81
TPM4-210ENST00000588507 PHKG2P15735 406 aa9.98□□□□□ -0.81
TPM4-210ENST00000588507 FBLN1P23142 703 aa9.98□□□□□ -0.81
TPM4-210ENST00000588507 PSMD1Q99460 953 aa9.98□□□□□ -0.81
TPM4-210ENST00000588507 CFHR5Q9BXR6 569 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms