RNA–Protein interactions for RNA: ENST00000588261.1

HDAC5-207, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-207ENST00000588261 BCORQ6W2J9 1755 aa19.49■□□□□ 0.71
HDAC5-207ENST00000588261 ZC3H4Q9UPT8 1303 aaKnown RBP19.49■□□□□ 0.71
HDAC5-207ENST00000588261 C2CD5Q86YS7 1000 aa19.48■□□□□ 0.71
HDAC5-207ENST00000588261 RRAGCQ9HB90 399 aa19.48■□□□□ 0.71
HDAC5-207ENST00000588261 A0A087WZG4 1122 aa19.47■□□□□ 0.71
HDAC5-207ENST00000588261 NFKBIEO00221 500 aa19.47■□□□□ 0.71
HDAC5-207ENST00000588261 RTF1Q92541 710 aaKnown RBP19.47■□□□□ 0.71
HDAC5-207ENST00000588261 TEX13AQ9BXU3 409 aaPredicted RBP19.47■□□□□ 0.71
HDAC5-207ENST00000588261 ZNF330Q9Y3S2 320 aaPredicted RBP19.47■□□□□ 0.71
HDAC5-207ENST00000588261 CCDC88AQ3V6T2 1871 aa19.47■□□□□ 0.71
HDAC5-207ENST00000588261 NBPF26B4DH59 902 aa19.46■□□□□ 0.71
HDAC5-207ENST00000588261 APAF1O14727 1248 aa19.46■□□□□ 0.71
HDAC5-207ENST00000588261 RIPK4P57078 832 aa19.46■□□□□ 0.71
HDAC5-207ENST00000588261 CCDC27Q2M243 656 aa19.46■□□□□ 0.71
HDAC5-207ENST00000588261 NBPF10Q6P3W6 841 aaKnown RBP19.46■□□□□ 0.71
HDAC5-207ENST00000588261 NBPF15Q8N660 670 aa19.46■□□□□ 0.71
HDAC5-207ENST00000588261 SMC1BQ8NDV3 1235 aa19.46■□□□□ 0.71
HDAC5-207ENST00000588261 TTLL6Q8N841 843 aa19.45■□□□□ 0.7
HDAC5-207ENST00000588261 JMYQ8N9B5 988 aa19.45■□□□□ 0.7
HDAC5-207ENST00000588261 MIS18AQ9NYP9 233 aa19.43■□□□□ 0.7
HDAC5-207ENST00000588261 H0YIN7 160 aa19.42■□□□□ 0.7
HDAC5-207ENST00000588261 LMNB1P20700 586 aa19.42■□□□□ 0.7
HDAC5-207ENST00000588261 HTRA3P83110 453 aa19.42■□□□□ 0.7
HDAC5-207ENST00000588261 DZIP3Q86Y13 1208 aaKnown RBP19.42■□□□□ 0.7
HDAC5-207ENST00000588261 BRIP1Q9BX63 1249 aa19.42■□□□□ 0.7
HDAC5-207ENST00000588261 TRIM35Q9UPQ4 493 aa19.41■□□□□ 0.7
HDAC5-207ENST00000588261 TIAM2Q8IVF5 1701 aa19.41■□□□□ 0.7
HDAC5-207ENST00000588261 SNRPA1P09661 255 aaKnown RBP19.4■□□□□ 0.7
HDAC5-207ENST00000588261 VEGFAP15692 232 aaPredicted RBP19.4■□□□□ 0.7
HDAC5-207ENST00000588261 CALD1Q05682 793 aaKnown RBP19.4■□□□□ 0.7
HDAC5-207ENST00000588261 RRP7AQ9Y3A4 280 aaKnown RBP19.4■□□□□ 0.7
HDAC5-207ENST00000588261 SLX4Q8IY92 1834 aa19.39■□□□□ 0.7
HDAC5-207ENST00000588261 PCNTO95613 3336 aa19.39■□□□□ 0.69
HDAC5-207ENST00000588261 GLTPD2A6NH11 291 aa19.39■□□□□ 0.69
HDAC5-207ENST00000588261 POTECB2RU33 542 aa19.39■□□□□ 0.69
HDAC5-207ENST00000588261 C21orf2O43822 256 aa19.39■□□□□ 0.69
HDAC5-207ENST00000588261 ZNF622Q969S3 477 aaKnown RBP eCLIP19.39■□□□□ 0.69
HDAC5-207ENST00000588261 THUMPD2Q9BTF0 503 aaKnown RBP19.39■□□□□ 0.69
HDAC5-207ENST00000588261 BABAM1Q9NWV8 329 aa19.39■□□□□ 0.69
HDAC5-207ENST00000588261 FER1L6Q2WGJ9 1857 aa19.39■□□□□ 0.69
HDAC5-207ENST00000588261 SRGNP10124 158 aa19.38■□□□□ 0.69
HDAC5-207ENST00000588261 NEUROD2Q15784 382 aa19.38■□□□□ 0.69
HDAC5-207ENST00000588261 KDM3BQ7LBC6 1761 aa19.38■□□□□ 0.69
HDAC5-207ENST00000588261 CNBD1Q8NA66 436 aa19.38■□□□□ 0.69
HDAC5-207ENST00000588261 SETDB2Q96T68 719 aa19.38■□□□□ 0.69
HDAC5-207ENST00000588261 ZNF219Q9P2Y4 722 aaPredicted RBP19.38■□□□□ 0.69
HDAC5-207ENST00000588261 PDZRN3Q9UPQ7 1066 aa19.38■□□□□ 0.69
HDAC5-207ENST00000588261 PDE6BP35913 854 aa19.37■□□□□ 0.69
HDAC5-207ENST00000588261 HLFQ16534 295 aa19.37■□□□□ 0.69
HDAC5-207ENST00000588261 DICER1Q9UPY3 1922 aaKnown RBP19.36■□□□□ 0.69
HDAC5-207ENST00000588261 TAF7Q15545 349 aaPredicted RBP19.36■□□□□ 0.69
HDAC5-207ENST00000588261 WWC1Q8IX03 1113 aa19.36■□□□□ 0.69
HDAC5-207ENST00000588261 LAMB4A4D0S4 1761 aa19.35■□□□□ 0.69
HDAC5-207ENST00000588261 COL13A1Q5TAT6 717 aaPredicted RBP19.35■□□□□ 0.69
HDAC5-207ENST00000588261 DPY19L2Q6NUT2 758 aa19.35■□□□□ 0.69
HDAC5-207ENST00000588261 CLEC4GQ6UXB4 293 aa19.35■□□□□ 0.69
HDAC5-207ENST00000588261 C7orf43Q8WVR3 580 aa19.35■□□□□ 0.69
HDAC5-207ENST00000588261 ARFGEF2Q9Y6D5 1785 aa19.34■□□□□ 0.69
HDAC5-207ENST00000588261 IL16Q14005 1332 aa19.34■□□□□ 0.69
HDAC5-207ENST00000588261 ZNF521Q96K83 1311 aa19.34■□□□□ 0.69
HDAC5-207ENST00000588261 PRPF40BQ6NWY9 871 aaKnown RBP19.34■□□□□ 0.69
HDAC5-207ENST00000588261 WDR63Q8IWG1 891 aa19.34■□□□□ 0.69
HDAC5-207ENST00000588261 CACNA1SQ13698 1873 aa19.34■□□□□ 0.69
HDAC5-207ENST00000588261 KLRG2A4D1S0 409 aaPredicted RBP19.33■□□□□ 0.68
HDAC5-207ENST00000588261 STYK1Q6J9G0 422 aa19.33■□□□□ 0.68
HDAC5-207ENST00000588261 LTBP3Q9NS15 1303 aa19.32■□□□□ 0.68
HDAC5-207ENST00000588261 EIF4A1P60842 406 aaKnown RBP19.32■□□□□ 0.68
HDAC5-207ENST00000588261 OLFM4Q6UX06 510 aa19.32■□□□□ 0.68
HDAC5-207ENST00000588261 TNS4Q8IZW8 715 aa19.32■□□□□ 0.68
HDAC5-207ENST00000588261 IFT57Q9NWB7 429 aa19.32■□□□□ 0.68
HDAC5-207ENST00000588261 ST5P78524 1137 aa19.31■□□□□ 0.68
HDAC5-207ENST00000588261 NPM2Q86SE8 214 aaKnown RBP19.31■□□□□ 0.68
HDAC5-207ENST00000588261 SLC51AQ86UW1 340 aa19.31■□□□□ 0.68
HDAC5-207ENST00000588261 NBPF5PQ86XG9 351 aaPredicted RBP19.31■□□□□ 0.68
HDAC5-207ENST00000588261 MASTLQ96GX5 879 aa19.31■□□□□ 0.68
HDAC5-207ENST00000588261 CFAP44Q96MT7 982 aa19.31■□□□□ 0.68
HDAC5-207ENST00000588261 NIP7Q9Y221 180 aaKnown RBP eCLIP19.31■□□□□ 0.68
HDAC5-207ENST00000588261 ABCC12Q96J65 1359 aa19.31■□□□□ 0.68
HDAC5-207ENST00000588261 GNAI1P63096 354 aa19.3■□□□□ 0.68
HDAC5-207ENST00000588261 TTLL7Q6ZT98 887 aa19.3■□□□□ 0.68
HDAC5-207ENST00000588261 CNKSR1Q969H4 720 aa19.3■□□□□ 0.68
HDAC5-207ENST00000588261 SNED1Q8TER0 1413 aa19.3■□□□□ 0.68
HDAC5-207ENST00000588261 FAM177BA6PVY3 158 aa19.29■□□□□ 0.68
HDAC5-207ENST00000588261 CHL1O00533 1208 aa19.29■□□□□ 0.68
HDAC5-207ENST00000588261 RGL2O15211 777 aa19.29■□□□□ 0.68
HDAC5-207ENST00000588261 ZNF853P0CG23 659 aa19.29■□□□□ 0.68
HDAC5-207ENST00000588261 LRP10Q7Z4F1 713 aa19.29■□□□□ 0.68
HDAC5-207ENST00000588261 TAOK3Q9H2K8 898 aa19.29■□□□□ 0.68
HDAC5-207ENST00000588261 ZBED9Q6R2W3 1325 aa19.28■□□□□ 0.68
HDAC5-207ENST00000588261 HNRNPUQ00839 825 aaKnown RBP eCLIP19.28■□□□□ 0.68
HDAC5-207ENST00000588261 ERFEQ4G0M1 354 aa19.28■□□□□ 0.68
HDAC5-207ENST00000588261 UBN2Q6ZU65 1347 aa19.27■□□□□ 0.68
HDAC5-207ENST00000588261 POTEIP0CG38 1075 aa19.27■□□□□ 0.68
HDAC5-207ENST00000588261 POTEJP0CG39 1038 aa19.27■□□□□ 0.68
HDAC5-207ENST00000588261 ZNF652Q9Y2D9 606 aa19.27■□□□□ 0.68
HDAC5-207ENST00000588261 NPHP1O15259 732 aa19.26■□□□□ 0.67
HDAC5-207ENST00000588261 CAPN15O75808 1086 aa19.26■□□□□ 0.67
HDAC5-207ENST00000588261 DDNO94850 711 aaPredicted RBP19.26■□□□□ 0.67
HDAC5-207ENST00000588261 TSPYL4Q9UJ04 414 aa19.26■□□□□ 0.67
HDAC5-207ENST00000588261 HSPA1AP0DMV8 641 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms