RNA–Protein interactions for RNA: ENST00000588254.1

SSC5D-203, Transcript of scavenger receptor cysteine rich family member with 5 domains, humanhuman

TSL 2

Gene SSC5D, Length 3,085 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5D-203ENST00000588254 ERCC4Q92889 916 aaPredicted RBP20.04■□□□□ 0.8
SSC5D-203ENST00000588254 FUCA2Q9BTY2 467 aa20.04■□□□□ 0.8
SSC5D-203ENST00000588254 CCDC9Q9Y3X0 531 aaKnown RBP20.04■□□□□ 0.8
SSC5D-203ENST00000588254 MAP3K11Q16584 847 aa20.03■□□□□ 0.8
SSC5D-203ENST00000588254 TPD52L1Q16890 204 aaPredicted RBP20.03■□□□□ 0.8
SSC5D-203ENST00000588254 CCDC30Q5VVM6 783 aa20.03■□□□□ 0.8
SSC5D-203ENST00000588254 C14orf37Q86TY3 774 aa20.03■□□□□ 0.8
SSC5D-203ENST00000588254 BICD2Q8TD16 824 aa20.03■□□□□ 0.8
SSC5D-203ENST00000588254 HYPKQ9NX55 129 aa20.03■□□□□ 0.8
SSC5D-203ENST00000588254 TRMT1Q9NXH9 659 aaKnown RBP20.03■□□□□ 0.8
SSC5D-203ENST00000588254 ALKQ9UM73 1620 aa20.03■□□□□ 0.8
SSC5D-203ENST00000588254 METP08581 1390 aa20.03■□□□□ 0.8
SSC5D-203ENST00000588254 GTF2F1P35269 517 aaKnown RBP eCLIP20.03■□□□□ 0.8
SSC5D-203ENST00000588254 CPSF1Q10570 1443 aaKnown RBP20.03■□□□□ 0.8
SSC5D-203ENST00000588254 ACEP12821 1306 aa20.03■□□□□ 0.8
SSC5D-203ENST00000588254 NCBP1Q09161 790 aaKnown RBP20.02■□□□□ 0.8
SSC5D-203ENST00000588254 TAF6LQ9Y6J9 622 aa20.02■□□□□ 0.8
SSC5D-203ENST00000588254 LETM1O95202 739 aaPredicted RBP20.02■□□□□ 0.8
SSC5D-203ENST00000588254 MRVI1Q9Y6F6 885 aa20.02■□□□□ 0.8
SSC5D-203ENST00000588254 ST3GAL1Q11201 340 aa20.01■□□□□ 0.79
SSC5D-203ENST00000588254 CBX8Q9HC52 389 aa20.01■□□□□ 0.79
SSC5D-203ENST00000588254 RAB11FIP3O75154 756 aa20.01■□□□□ 0.79
SSC5D-203ENST00000588254 TAF7Q15545 349 aaPredicted RBP20.01■□□□□ 0.79
SSC5D-203ENST00000588254 FAM227BQ96M60 508 aa20.01■□□□□ 0.79
SSC5D-203ENST00000588254 STAP2Q9UGK3 403 aa20.01■□□□□ 0.79
SSC5D-203ENST00000588254 TPCN1Q9ULQ1 816 aa20.01■□□□□ 0.79
SSC5D-203ENST00000588254 CYP46A1Q9Y6A2 500 aa20.01■□□□□ 0.79
SSC5D-203ENST00000588254 TTC21BQ7Z4L5 1316 aa20.01■□□□□ 0.79
SSC5D-203ENST00000588254 FILIP1Q7Z7B0 1213 aa20■□□□□ 0.79
SSC5D-203ENST00000588254 TMEM87AQ8NBN3 555 aa20■□□□□ 0.79
SSC5D-203ENST00000588254 FAM200AQ8TCP9 573 aa20■□□□□ 0.79
SSC5D-203ENST00000588254 EYA1Q99502 592 aa20■□□□□ 0.79
SSC5D-203ENST00000588254 CRB1P82279 1406 aa20■□□□□ 0.79
SSC5D-203ENST00000588254 ATP7BP35670 1465 aa20■□□□□ 0.79
SSC5D-203ENST00000588254 SIL1Q9H173 461 aa19.99■□□□□ 0.79
SSC5D-203ENST00000588254 ERICH4A6NGS2 130 aa19.99■□□□□ 0.79
SSC5D-203ENST00000588254 KRT85P78386 507 aa19.99■□□□□ 0.79
SSC5D-203ENST00000588254 USP27XA6NNY8 438 aa19.99■□□□□ 0.79
SSC5D-203ENST00000588254 CCDC144BQ3MJ40 725 aa19.98■□□□□ 0.79
SSC5D-203ENST00000588254 CCDC144CPQ8IYA2 1237 aa19.98■□□□□ 0.79
SSC5D-203ENST00000588254 SPATA32Q96LK8 384 aa19.98■□□□□ 0.79
SSC5D-203ENST00000588254 PI4KAP2A4QPH2 592 aa19.98■□□□□ 0.79
SSC5D-203ENST00000588254 NR1I2O75469 434 aa19.98■□□□□ 0.79
SSC5D-203ENST00000588254 UTP14CQ5TAP6 766 aaKnown RBP19.98■□□□□ 0.79
SSC5D-203ENST00000588254 PI4KAP1Q8N8J0 262 aa19.98■□□□□ 0.79
SSC5D-203ENST00000588254 CCDC8Q9H0W5 538 aaPredicted RBP19.98■□□□□ 0.79
SSC5D-203ENST00000588254 NDUFB9Q9Y6M9 179 aa19.98■□□□□ 0.79
SSC5D-203ENST00000588254 RIMS1Q86UR5 1692 aaKnown RBP19.98■□□□□ 0.79
SSC5D-203ENST00000588254 MLH3Q9UHC1 1453 aa19.97■□□□□ 0.79
SSC5D-203ENST00000588254 LARP1Q6PKG0 1096 aaKnown RBP19.97■□□□□ 0.79
SSC5D-203ENST00000588254 CACTINQ8WUQ7 758 aaKnown RBP19.97■□□□□ 0.79
SSC5D-203ENST00000588254 ZBTB9Q96C00 473 aa19.97■□□□□ 0.79
SSC5D-203ENST00000588254 LRRC2Q9BYS8 371 aa19.97■□□□□ 0.79
SSC5D-203ENST00000588254 CLIP2Q9UDT6 1046 aa19.97■□□□□ 0.79
SSC5D-203ENST00000588254 NAP1L2Q9ULW6 460 aaPredicted RBP19.97■□□□□ 0.79
SSC5D-203ENST00000588254 CCDC112Q8NEF3 446 aa19.97■□□□□ 0.79
SSC5D-203ENST00000588254 AATKQ6ZMQ8 1374 aa19.97■□□□□ 0.79
SSC5D-203ENST00000588254 ZNF165P49910 485 aa19.96■□□□□ 0.79
SSC5D-203ENST00000588254 KIF1BPQ96EK5 621 aa19.96■□□□□ 0.79
SSC5D-203ENST00000588254 FTOQ9C0B1 505 aaKnown RBP eCLIP19.96■□□□□ 0.79
SSC5D-203ENST00000588254 ST7Q9NRC1 585 aa19.96■□□□□ 0.79
SSC5D-203ENST00000588254 RBM8AQ9Y5S9 174 aaKnown RBP19.96■□□□□ 0.79
SSC5D-203ENST00000588254 ZSCAN25Q6NSZ9 544 aa19.96■□□□□ 0.79
SSC5D-203ENST00000588254 EDC3Q96F86 508 aaKnown RBP19.96■□□□□ 0.79
SSC5D-203ENST00000588254 TRERF1Q96PN7 1200 aa19.96■□□□□ 0.79
SSC5D-203ENST00000588254 JAK2O60674 1132 aa19.95■□□□□ 0.78
SSC5D-203ENST00000588254 CHGBP05060 677 aa19.95■□□□□ 0.78
SSC5D-203ENST00000588254 GTPBP4Q9BZE4 634 aaKnown RBP19.95■□□□□ 0.78
SSC5D-203ENST00000588254 CHPF2Q9P2E5 772 aa19.95■□□□□ 0.78
SSC5D-203ENST00000588254 IL17REQ8NFR9 667 aa19.94■□□□□ 0.78
SSC5D-203ENST00000588254 SSH3Q8TE77 659 aa19.94■□□□□ 0.78
SSC5D-203ENST00000588254 USP16Q9Y5T5 823 aa19.94■□□□□ 0.78
SSC5D-203ENST00000588254 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.94■□□□□ 0.78
SSC5D-203ENST00000588254 KCNQ3O43525 872 aa19.94■□□□□ 0.78
SSC5D-203ENST00000588254 IFIT2P09913 472 aaKnown RBP19.94■□□□□ 0.78
SSC5D-203ENST00000588254 ZKSCAN1P17029 563 aaPredicted RBP19.94■□□□□ 0.78
SSC5D-203ENST00000588254 AACSQ86V21 672 aa19.94■□□□□ 0.78
SSC5D-203ENST00000588254 ANKRD7Q92527 254 aa19.94■□□□□ 0.78
SSC5D-203ENST00000588254 BOLA2Q9H3K6 86 aa19.94■□□□□ 0.78
SSC5D-203ENST00000588254 SSH2Q76I76 1423 aa19.93■□□□□ 0.78
SSC5D-203ENST00000588254 KLHDC4Q8TBB5 520 aa19.93■□□□□ 0.78
SSC5D-203ENST00000588254 NGDNQ8NEJ9 315 aaKnown RBP19.93■□□□□ 0.78
SSC5D-203ENST00000588254 SLC26A8Q96RN1 970 aa19.93■□□□□ 0.78
SSC5D-203ENST00000588254 VGLL3A8MV65 326 aa19.92■□□□□ 0.78
SSC5D-203ENST00000588254 CLASRPQ8N2M8 674 aaKnown RBP19.92■□□□□ 0.78
SSC5D-203ENST00000588254 GNAT3A8MTJ3 354 aa19.92■□□□□ 0.78
SSC5D-203ENST00000588254 HSP90B1P14625 803 aaKnown RBP19.92■□□□□ 0.78
SSC5D-203ENST00000588254 ZNF75DP51815 510 aa19.92■□□□□ 0.78
SSC5D-203ENST00000588254 NMIQ13287 307 aaPredicted RBP19.91■□□□□ 0.78
SSC5D-203ENST00000588254 CREB3L3Q68CJ9 461 aa19.91■□□□□ 0.78
SSC5D-203ENST00000588254 CWF19L2Q2TBE0 894 aaKnown RBP19.91■□□□□ 0.78
SSC5D-203ENST00000588254 ZNF215Q9UL58 517 aaPredicted RBP19.91■□□□□ 0.78
SSC5D-203ENST00000588254 TMEM131LA2VDJ0 1609 aa19.91■□□□□ 0.78
SSC5D-203ENST00000588254 GUCY1B3Q02153 619 aa19.91■□□□□ 0.78
SSC5D-203ENST00000588254 TLR7Q9NYK1 1049 aaKnown RBP19.91■□□□□ 0.78
SSC5D-203ENST00000588254 C9orf78Q9NZ63 289 aaPredicted RBP19.91■□□□□ 0.78
SSC5D-203ENST00000588254 AIMP1Q12904 312 aaKnown RBP19.9■□□□□ 0.78
SSC5D-203ENST00000588254 GOLGA6L19H0YKK7 550 aa19.89■□□□□ 0.78
SSC5D-203ENST00000588254 VPS53Q5VIR6 699 aa19.89■□□□□ 0.78
SSC5D-203ENST00000588254 CEP135Q66GS9 1140 aa19.89■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms