RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 DDX58O95786 925 aaKnown RBP14.32□□□□□ -0.12
VMP1-207ENST00000588131 CRKLP46109 303 aaKnown RBP14.32□□□□□ -0.12
VMP1-207ENST00000588131 CCDC87Q9NVE4 849 aa14.32□□□□□ -0.12
VMP1-207ENST00000588131 CCNL1Q9UK58 526 aaPredicted RBP14.32□□□□□ -0.12
VMP1-207ENST00000588131 ATP10DQ9P241 1426 aa14.32□□□□□ -0.12
VMP1-207ENST00000588131 ZBTB7BO15156 539 aaPredicted RBP14.31□□□□□ -0.12
VMP1-207ENST00000588131 CCT4P50991 539 aaKnown RBP14.31□□□□□ -0.12
VMP1-207ENST00000588131 B4GALNT3Q6L9W6 998 aa14.31□□□□□ -0.12
VMP1-207ENST00000588131 ZNF330Q9Y3S2 320 aaPredicted RBP14.31□□□□□ -0.12
VMP1-207ENST00000588131 BEND3Q5T5X7 828 aa14.3□□□□□ -0.12
VMP1-207ENST00000588131 ANKRD13DQ6ZTN6 518 aa14.3□□□□□ -0.12
VMP1-207ENST00000588131 RIC3Q7Z5B4 369 aa14.3□□□□□ -0.12
VMP1-207ENST00000588131 ZBTB40Q9NUA8 1239 aa14.3□□□□□ -0.12
VMP1-207ENST00000588131 C4BP0C0L5 1744 aa14.29□□□□□ -0.12
VMP1-207ENST00000588131 IL6STP40189 918 aaPredicted RBP14.29□□□□□ -0.12
VMP1-207ENST00000588131 PLBD2Q8NHP8 589 aa14.29□□□□□ -0.12
VMP1-207ENST00000588131 LRRC4BQ9NT99 713 aa14.29□□□□□ -0.12
VMP1-207ENST00000588131 CNTNAP4Q9C0A0 1308 aa14.29□□□□□ -0.12
VMP1-207ENST00000588131 EIF5P55010 431 aaKnown RBP14.28□□□□□ -0.12
VMP1-207ENST00000588131 MEIS3Q99687 375 aa14.28□□□□□ -0.12
VMP1-207ENST00000588131 MYD88Q99836 296 aa14.28□□□□□ -0.12
VMP1-207ENST00000588131 METTL22Q9BUU2 404 aaPredicted RBP14.28□□□□□ -0.12
VMP1-207ENST00000588131 SRCIN1Q9C0H9 1055 aa14.28□□□□□ -0.12
VMP1-207ENST00000588131 ZBTB3Q9H5J0 574 aa14.28□□□□□ -0.12
VMP1-207ENST00000588131 PCDHB15Q9Y5E8 787 aa14.28□□□□□ -0.12
VMP1-207ENST00000588131 AFDNP55196 1824 aaKnown RBP14.27□□□□□ -0.12
VMP1-207ENST00000588131 APBA3O96018 575 aa14.27□□□□□ -0.13
VMP1-207ENST00000588131 AAMPQ13685 434 aa14.27□□□□□ -0.13
VMP1-207ENST00000588131 CWF19L2Q2TBE0 894 aaKnown RBP14.27□□□□□ -0.13
VMP1-207ENST00000588131 CCDC136Q96JN2 1154 aa14.27□□□□□ -0.13
VMP1-207ENST00000588131 C1orf115Q9H7X2 142 aa14.27□□□□□ -0.13
VMP1-207ENST00000588131 RGPD3A6NKT7 1758 aaPredicted RBP14.27□□□□□ -0.13
VMP1-207ENST00000588131 RGPD4Q7Z3J3 1758 aa14.27□□□□□ -0.13
VMP1-207ENST00000588131 MAP3K15Q6ZN16 1313 aa14.26□□□□□ -0.13
VMP1-207ENST00000588131 IGKV5-2P06315 115 aa14.26□□□□□ -0.13
VMP1-207ENST00000588131 TXNRD1Q16881 649 aa14.26□□□□□ -0.13
VMP1-207ENST00000588131 RC3H1Q5TC82 1133 aaKnown RBP14.26□□□□□ -0.13
VMP1-207ENST00000588131 KIF6Q6ZMV9 814 aa14.26□□□□□ -0.13
VMP1-207ENST00000588131 PROM2Q8N271 834 aa14.26□□□□□ -0.13
VMP1-207ENST00000588131 LINS1Q8NG48 757 aa14.26□□□□□ -0.13
VMP1-207ENST00000588131 COL15A1P39059 1388 aa14.25□□□□□ -0.13
VMP1-207ENST00000588131 ANKRD36CQ5JPF3 1778 aa14.25□□□□□ -0.13
VMP1-207ENST00000588131 BCORQ6W2J9 1755 aa14.25□□□□□ -0.13
VMP1-207ENST00000588131 PLSCR1O15162 318 aa14.25□□□□□ -0.13
VMP1-207ENST00000588131 ALDH1L1O75891 902 aa14.25□□□□□ -0.13
VMP1-207ENST00000588131 SLC27A3Q5K4L6 730 aa14.25□□□□□ -0.13
VMP1-207ENST00000588131 SMIM5Q71RC9 77 aa14.25□□□□□ -0.13
VMP1-207ENST00000588131 DZIP3Q86Y13 1208 aaKnown RBP14.25□□□□□ -0.13
VMP1-207ENST00000588131 ARXQ96QS3 562 aa14.25□□□□□ -0.13
VMP1-207ENST00000588131 CHMP4BQ9H444 224 aaKnown RBP14.25□□□□□ -0.13
VMP1-207ENST00000588131 TBC1D2BQ9UPU7 963 aa14.25□□□□□ -0.13
VMP1-207ENST00000588131 NEURL1BA8MQ27 555 aa14.24□□□□□ -0.13
VMP1-207ENST00000588131 ATP5J2-PTCD1G3V325 749 aa14.24□□□□□ -0.13
VMP1-207ENST00000588131 RPS6KA4O75676 772 aa14.24□□□□□ -0.13
VMP1-207ENST00000588131 NEXNQ0ZGT2 675 aa14.24□□□□□ -0.13
VMP1-207ENST00000588131 HLFQ16534 295 aa14.24□□□□□ -0.13
VMP1-207ENST00000588131 AMIGO3Q86WK7 504 aa14.24□□□□□ -0.13
VMP1-207ENST00000588131 USP44Q9H0E7 712 aa14.24□□□□□ -0.13
VMP1-207ENST00000588131 SCN7AQ01118 1682 aa14.23□□□□□ -0.13
VMP1-207ENST00000588131 NUP98P52948 1817 aa14.23□□□□□ -0.13
VMP1-207ENST00000588131 GNPATO15228 680 aa14.23□□□□□ -0.13
VMP1-207ENST00000588131 C4AP0C0L4 1744 aa14.23□□□□□ -0.13
VMP1-207ENST00000588131 UBR3Q6ZT12 1888 aa14.23□□□□□ -0.13
VMP1-207ENST00000588131 IBTKQ9P2D0 1353 aaPredicted RBP14.22□□□□□ -0.13
VMP1-207ENST00000588131 CAMTA2O94983 1202 aa14.22□□□□□ -0.13
VMP1-207ENST00000588131 IGHDP01880 384 aa14.22□□□□□ -0.13
VMP1-207ENST00000588131 NBPF7P0C2Y1 421 aaPredicted RBP14.22□□□□□ -0.13
VMP1-207ENST00000588131 TCIRG1Q13488 830 aa14.22□□□□□ -0.13
VMP1-207ENST00000588131 GIGYF2Q6Y7W6 1299 aaKnown RBP14.22□□□□□ -0.13
VMP1-207ENST00000588131 NPM2Q86SE8 214 aaKnown RBP14.22□□□□□ -0.13
VMP1-207ENST00000588131 AK7Q96M32 723 aa14.22□□□□□ -0.13
VMP1-207ENST00000588131 ISCA1Q9BUE6 129 aa14.22□□□□□ -0.13
VMP1-207ENST00000588131 KDM2BQ8NHM5 1336 aa14.21□□□□□ -0.13
VMP1-207ENST00000588131 ERVV-1B6SEH8 477 aa14.21□□□□□ -0.13
VMP1-207ENST00000588131 GNAI3P08754 354 aa14.21□□□□□ -0.13
VMP1-207ENST00000588131 UBTFL1P0CB47 393 aaPredicted RBP14.21□□□□□ -0.13
VMP1-207ENST00000588131 GCKRQ14397 625 aa14.21□□□□□ -0.13
VMP1-207ENST00000588131 EP400Q96L91 3159 aa14.2□□□□□ -0.14
VMP1-207ENST00000588131 UTYO14607 1347 aa14.2□□□□□ -0.14
VMP1-207ENST00000588131 A0A087WZG4 1122 aa14.2□□□□□ -0.14
VMP1-207ENST00000588131 GRM8O00222 908 aa14.2□□□□□ -0.14
VMP1-207ENST00000588131 GNAI2P04899 355 aa14.2□□□□□ -0.14
VMP1-207ENST00000588131 SIRT2Q8IXJ6 389 aa14.2□□□□□ -0.14
VMP1-207ENST00000588131 C9orf78Q9NZ63 289 aaPredicted RBP14.2□□□□□ -0.14
VMP1-207ENST00000588131 RTCBQ9Y3I0 505 aaKnown RBP14.2□□□□□ -0.14
VMP1-207ENST00000588131 LRRFIP2Q9Y608 721 aaKnown RBP14.2□□□□□ -0.14
VMP1-207ENST00000588131 PHF14O94880 888 aa14.19□□□□□ -0.14
VMP1-207ENST00000588131 GPTP24298 496 aa14.19□□□□□ -0.14
VMP1-207ENST00000588131 EN1Q05925 392 aaPredicted RBP14.19□□□□□ -0.14
VMP1-207ENST00000588131 EZH2Q15910 746 aaKnown RBP14.19□□□□□ -0.14
VMP1-207ENST00000588131 CEP85Q6P2H3 762 aa14.19□□□□□ -0.14
VMP1-207ENST00000588131 JARID2Q92833 1246 aaPredicted RBP14.19□□□□□ -0.14
VMP1-207ENST00000588131 CAMKK2Q96RR4 588 aa14.19□□□□□ -0.14
VMP1-207ENST00000588131 CWC25Q9NXE8 425 aaPredicted RBP14.19□□□□□ -0.14
VMP1-207ENST00000588131 TUBGCP6Q96RT7 1819 aa14.19□□□□□ -0.14
VMP1-207ENST00000588131 HDAC1Q13547 482 aaPredicted RBP14.18□□□□□ -0.14
VMP1-207ENST00000588131 ZNF827Q17R98 1081 aa14.18□□□□□ -0.14
VMP1-207ENST00000588131 HSP90AB3PQ58FF7 597 aa14.18□□□□□ -0.14
VMP1-207ENST00000588131 ANKRD44Q8N8A2 993 aa14.18□□□□□ -0.14
VMP1-207ENST00000588131 CCDC191Q8NCU4 936 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms