RNA–Protein interactions for RNA: ENST00000588094.1

ZNF404-203, Transcript of zinc finger protein 404, humanhuman

TSL 3

Gene ZNF404, Length 631 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404-203ENST00000588094 N4BP2Q86UW6 1770 aaPredicted RBP12.44□□□□□ -0.42
ZNF404-203ENST00000588094 PHF14O94880 888 aa12.44□□□□□ -0.42
ZNF404-203ENST00000588094 SMIM5Q71RC9 77 aa12.44□□□□□ -0.42
ZNF404-203ENST00000588094 COPS6Q7L5N1 327 aa12.44□□□□□ -0.42
ZNF404-203ENST00000588094 NPM2Q86SE8 214 aaKnown RBP12.44□□□□□ -0.42
ZNF404-203ENST00000588094 COL23A1Q86Y22 540 aaPredicted RBP12.44□□□□□ -0.42
ZNF404-203ENST00000588094 MRPL50Q8N5N7 158 aaKnown RBP12.44□□□□□ -0.42
ZNF404-203ENST00000588094 PHAXQ9H814 394 aaKnown RBP12.44□□□□□ -0.42
ZNF404-203ENST00000588094 NARFQ9UHQ1 456 aa12.44□□□□□ -0.42
ZNF404-203ENST00000588094 ZNF330Q9Y3S2 320 aaPredicted RBP12.44□□□□□ -0.42
ZNF404-203ENST00000588094 USP42Q9H9J4 1324 aaKnown RBP12.43□□□□□ -0.42
ZNF404-203ENST00000588094 RGL2O15211 777 aa12.43□□□□□ -0.42
ZNF404-203ENST00000588094 RFC4P35249 363 aa12.43□□□□□ -0.42
ZNF404-203ENST00000588094 DZIP3Q86Y13 1208 aaKnown RBP12.43□□□□□ -0.42
ZNF404-203ENST00000588094 XAGE3Q8WTP9 111 aa12.43□□□□□ -0.42
ZNF404-203ENST00000588094 SMC4Q9NTJ3 1288 aa12.43□□□□□ -0.42
ZNF404-203ENST00000588094 ERVV-1B6SEH8 477 aa12.42□□□□□ -0.42
ZNF404-203ENST00000588094 FLIIQ13045 1269 aa12.42□□□□□ -0.42
ZNF404-203ENST00000588094 R3HDM1Q15032 1099 aaKnown RBP12.42□□□□□ -0.42
ZNF404-203ENST00000588094 KIF6Q6ZMV9 814 aa12.42□□□□□ -0.42
ZNF404-203ENST00000588094 TTLL7Q6ZT98 887 aa12.42□□□□□ -0.42
ZNF404-203ENST00000588094 G2E3Q7L622 706 aa12.42□□□□□ -0.42
ZNF404-203ENST00000588094 BCL2L13Q9BXK5 485 aa12.42□□□□□ -0.42
ZNF404-203ENST00000588094 RCAN3Q9UKA8 241 aa12.42□□□□□ -0.42
ZNF404-203ENST00000588094 TBC1D2BQ9UPU7 963 aa12.42□□□□□ -0.42
ZNF404-203ENST00000588094 MAP3K15Q6ZN16 1313 aa12.41□□□□□ -0.42
ZNF404-203ENST00000588094 ZPR1O75312 459 aa12.41□□□□□ -0.42
ZNF404-203ENST00000588094 BCAR3O75815 825 aa12.41□□□□□ -0.42
ZNF404-203ENST00000588094 CAMTA2O94983 1202 aa12.41□□□□□ -0.42
ZNF404-203ENST00000588094 AIMP1Q12904 312 aaKnown RBP12.41□□□□□ -0.42
ZNF404-203ENST00000588094 CLEC4GQ6UXB4 293 aa12.41□□□□□ -0.42
ZNF404-203ENST00000588094 ANKRD13DQ6ZTN6 518 aa12.41□□□□□ -0.42
ZNF404-203ENST00000588094 PLBD2Q8NHP8 589 aa12.41□□□□□ -0.42
ZNF404-203ENST00000588094 SLC16A10Q8TF71 515 aa12.41□□□□□ -0.42
ZNF404-203ENST00000588094 PDGFDQ9GZP0 370 aaPredicted RBP12.41□□□□□ -0.42
ZNF404-203ENST00000588094 PTPRCP08575 1304 aa12.4□□□□□ -0.42
ZNF404-203ENST00000588094 DDX58O95786 925 aaKnown RBP12.4□□□□□ -0.42
ZNF404-203ENST00000588094 USPL1Q5W0Q7 1092 aa12.4□□□□□ -0.42
ZNF404-203ENST00000588094 SRP68Q9UHB9 627 aaKnown RBP12.4□□□□□ -0.42
ZNF404-203ENST00000588094 ADCY9O60503 1353 aa12.4□□□□□ -0.42
ZNF404-203ENST00000588094 KIF16BQ96L93 1317 aa12.39□□□□□ -0.43
ZNF404-203ENST00000588094 PSDA5PKW4 1024 aaPredicted RBP12.39□□□□□ -0.43
ZNF404-203ENST00000588094 GYS1P13807 737 aa12.39□□□□□ -0.43
ZNF404-203ENST00000588094 FKBP5Q13451 457 aaPredicted RBP12.39□□□□□ -0.43
ZNF404-203ENST00000588094 KSR2Q6VAB6 950 aa12.39□□□□□ -0.43
ZNF404-203ENST00000588094 GIGYF2Q6Y7W6 1299 aaKnown RBP12.39□□□□□ -0.43
ZNF404-203ENST00000588094 ARHGAP45Q92619 1136 aa12.39□□□□□ -0.43
ZNF404-203ENST00000588094 ARXQ96QS3 562 aa12.39□□□□□ -0.43
ZNF404-203ENST00000588094 BCL2L12Q9HB09 334 aa12.39□□□□□ -0.43
ZNF404-203ENST00000588094 NRXN2Q9P2S2 1712 aa12.38□□□□□ -0.43
ZNF404-203ENST00000588094 PI4KAP2A4QPH2 592 aa12.38□□□□□ -0.43
ZNF404-203ENST00000588094 HLFQ16534 295 aa12.38□□□□□ -0.43
ZNF404-203ENST00000588094 PI4KAP1Q8N8J0 262 aa12.38□□□□□ -0.43
ZNF404-203ENST00000588094 ZBTB3Q9H5J0 574 aa12.38□□□□□ -0.43
ZNF404-203ENST00000588094 NOB1Q9ULX3 412 aaKnown RBP12.38□□□□□ -0.43
ZNF404-203ENST00000588094 ZNF652Q9Y2D9 606 aa12.38□□□□□ -0.43
ZNF404-203ENST00000588094 ATP10DQ9P241 1426 aa12.37□□□□□ -0.43
ZNF404-203ENST00000588094 IPO8O15397 1037 aaKnown RBP12.37□□□□□ -0.43
ZNF404-203ENST00000588094 FKBP8Q14318 412 aa12.37□□□□□ -0.43
ZNF404-203ENST00000588094 RIC3Q7Z5B4 369 aa12.37□□□□□ -0.43
ZNF404-203ENST00000588094 NLGN1Q8N2Q7 840 aa12.37□□□□□ -0.43
ZNF404-203ENST00000588094 MAP3K2Q9Y2U5 619 aa12.37□□□□□ -0.43
ZNF404-203ENST00000588094 MYH3P11055 1940 aa12.37□□□□□ -0.43
ZNF404-203ENST00000588094 PXDNLA1KZ92 1463 aa12.36□□□□□ -0.43
ZNF404-203ENST00000588094 TCIRG1Q13488 830 aa12.36□□□□□ -0.43
ZNF404-203ENST00000588094 HSP90AB3PQ58FF7 597 aa12.36□□□□□ -0.43
ZNF404-203ENST00000588094 DNAAF4Q8WXU2 420 aa12.36□□□□□ -0.43
ZNF404-203ENST00000588094 METTL22Q9BUU2 404 aaPredicted RBP12.36□□□□□ -0.43
ZNF404-203ENST00000588094 MTFR1LQ9H019 292 aa12.36□□□□□ -0.43
ZNF404-203ENST00000588094 KIF13BQ9NQT8 1826 aa12.35□□□□□ -0.43
ZNF404-203ENST00000588094 F6X3S4 739 aa12.35□□□□□ -0.43
ZNF404-203ENST00000588094 TM4SF1P30408 202 aa12.35□□□□□ -0.43
ZNF404-203ENST00000588094 TRIM28Q13263 835 aaKnown RBP12.35□□□□□ -0.43
ZNF404-203ENST00000588094 ZKSCAN2Q63HK3 967 aa12.35□□□□□ -0.43
ZNF404-203ENST00000588094 TBC1D9BQ66K14 1250 aa12.35□□□□□ -0.43
ZNF404-203ENST00000588094 ATF7IPQ6VMQ6 1270 aa12.35□□□□□ -0.43
ZNF404-203ENST00000588094 ZNF34Q8IZ26 560 aa12.35□□□□□ -0.43
ZNF404-203ENST00000588094 FRAT1Q92837 279 aaPredicted RBP12.35□□□□□ -0.43
ZNF404-203ENST00000588094 API5Q9BZZ5 524 aaKnown RBP12.35□□□□□ -0.43
ZNF404-203ENST00000588094 ZBTB7AO95365 584 aa12.34□□□□□ -0.43
ZNF404-203ENST00000588094 MYCNP04198 464 aaPredicted RBP12.34□□□□□ -0.43
ZNF404-203ENST00000588094 TRIM27P14373 513 aa12.34□□□□□ -0.43
ZNF404-203ENST00000588094 NFIXQ14938 502 aa12.34□□□□□ -0.43
ZNF404-203ENST00000588094 SETDB2Q96T68 719 aa12.34□□□□□ -0.43
ZNF404-203ENST00000588094 ISCA1Q9BUE6 129 aa12.34□□□□□ -0.43
ZNF404-203ENST00000588094 NIP7Q9Y221 180 aaKnown RBP eCLIP12.34□□□□□ -0.43
ZNF404-203ENST00000588094 ANKRD31Q8N7Z5 1873 aa12.34□□□□□ -0.43
ZNF404-203ENST00000588094 LAMB2P55268 1798 aa12.33□□□□□ -0.44
ZNF404-203ENST00000588094 IBTKQ9P2D0 1353 aaPredicted RBP12.33□□□□□ -0.44
ZNF404-203ENST00000588094 NEXNQ0ZGT2 675 aa12.33□□□□□ -0.44
ZNF404-203ENST00000588094 POLA2Q14181 598 aa12.33□□□□□ -0.44
ZNF404-203ENST00000588094 BEND3Q5T5X7 828 aa12.33□□□□□ -0.44
ZNF404-203ENST00000588094 MSL1Q68DK7 614 aa12.33□□□□□ -0.44
ZNF404-203ENST00000588094 MYD88Q99836 296 aa12.33□□□□□ -0.44
ZNF404-203ENST00000588094 ABCC4O15439 1325 aa12.33□□□□□ -0.44
ZNF404-203ENST00000588094 UBN2Q6ZU65 1347 aa12.33□□□□□ -0.44
ZNF404-203ENST00000588094 CARMIL3Q8ND23 1372 aa12.32□□□□□ -0.44
ZNF404-203ENST00000588094 DDX60Q8IY21 1712 aaKnown RBP12.32□□□□□ -0.44
ZNF404-203ENST00000588094 POLRMTO00411 1230 aaKnown RBP12.32□□□□□ -0.44
ZNF404-203ENST00000588094 IGKV5-2P06315 115 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms