RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 GYS1P13807 737 aa13.72□□□□□ -0.21
SMARCA4-213ENST00000587988 HLFQ16534 295 aa13.72□□□□□ -0.21
SMARCA4-213ENST00000587988 ZBTB3Q9H5J0 574 aa13.72□□□□□ -0.21
SMARCA4-213ENST00000587988 SMC4Q9NTJ3 1288 aa13.72□□□□□ -0.21
SMARCA4-213ENST00000587988 BCORQ6W2J9 1755 aa13.71□□□□□ -0.21
SMARCA4-213ENST00000587988 MAP3K15Q6ZN16 1313 aa13.71□□□□□ -0.21
SMARCA4-213ENST00000587988 ZBTB7AO95365 584 aa13.71□□□□□ -0.21
SMARCA4-213ENST00000587988 FLIIQ13045 1269 aa13.71□□□□□ -0.21
SMARCA4-213ENST00000587988 FKBP8Q14318 412 aa13.71□□□□□ -0.21
SMARCA4-213ENST00000587988 MSL1Q68DK7 614 aa13.71□□□□□ -0.21
SMARCA4-213ENST00000587988 KIF6Q6ZMV9 814 aa13.71□□□□□ -0.21
SMARCA4-213ENST00000587988 SCN7AQ01118 1682 aa13.7□□□□□ -0.22
SMARCA4-213ENST00000587988 ANKRD13DQ6ZTN6 518 aa13.7□□□□□ -0.22
SMARCA4-213ENST00000587988 NUP98P52948 1817 aa13.69□□□□□ -0.22
SMARCA4-213ENST00000587988 ERVV-1B6SEH8 477 aa13.69□□□□□ -0.22
SMARCA4-213ENST00000587988 BRPF1P55201 1214 aaPredicted RBP13.69□□□□□ -0.22
SMARCA4-213ENST00000587988 PLBD2Q8NHP8 589 aa13.69□□□□□ -0.22
SMARCA4-213ENST00000587988 SLC16A10Q8TF71 515 aa13.69□□□□□ -0.22
SMARCA4-213ENST00000587988 ATF5Q9Y2D1 282 aaPredicted RBP13.69□□□□□ -0.22
SMARCA4-213ENST00000587988 PI4KAP2A4QPH2 592 aa13.68□□□□□ -0.22
SMARCA4-213ENST00000587988 FKBP5Q13451 457 aaPredicted RBP13.68□□□□□ -0.22
SMARCA4-213ENST00000587988 TBC1D9BQ66K14 1250 aa13.68□□□□□ -0.22
SMARCA4-213ENST00000587988 GIGYF2Q6Y7W6 1299 aaKnown RBP13.68□□□□□ -0.22
SMARCA4-213ENST00000587988 RIC3Q7Z5B4 369 aa13.68□□□□□ -0.22
SMARCA4-213ENST00000587988 PI4KAP1Q8N8J0 262 aa13.68□□□□□ -0.22
SMARCA4-213ENST00000587988 RCAN3Q9UKA8 241 aa13.68□□□□□ -0.22
SMARCA4-213ENST00000587988 NOB1Q9ULX3 412 aaKnown RBP13.68□□□□□ -0.22
SMARCA4-213ENST00000587988 ADCY9O60503 1353 aa13.68□□□□□ -0.22
SMARCA4-213ENST00000587988 F6X3S4 739 aa13.67□□□□□ -0.22
SMARCA4-213ENST00000587988 DDX58O95786 925 aaKnown RBP13.67□□□□□ -0.22
SMARCA4-213ENST00000587988 CLEC4GQ6UXB4 293 aa13.67□□□□□ -0.22
SMARCA4-213ENST00000587988 KSR2Q6VAB6 950 aa13.67□□□□□ -0.22
SMARCA4-213ENST00000587988 BICDL1Q6ZP65 573 aa13.67□□□□□ -0.22
SMARCA4-213ENST00000587988 MTFR1LQ9H019 292 aa13.67□□□□□ -0.22
SMARCA4-213ENST00000587988 MAP3K2Q9Y2U5 619 aa13.67□□□□□ -0.22
SMARCA4-213ENST00000587988 ARFGEF2Q9Y6D5 1785 aa13.67□□□□□ -0.22
SMARCA4-213ENST00000587988 TM4SF1P30408 202 aa13.66□□□□□ -0.22
SMARCA4-213ENST00000587988 NFIXQ14938 502 aa13.66□□□□□ -0.22
SMARCA4-213ENST00000587988 NLGN1Q8N2Q7 840 aa13.66□□□□□ -0.22
SMARCA4-213ENST00000587988 ZNF652Q9Y2D9 606 aa13.66□□□□□ -0.22
SMARCA4-213ENST00000587988 COL24A1Q17RW2 1714 aa13.65□□□□□ -0.22
SMARCA4-213ENST00000587988 RGL2O15211 777 aa13.65□□□□□ -0.22
SMARCA4-213ENST00000587988 GPTP24298 496 aa13.65□□□□□ -0.22
SMARCA4-213ENST00000587988 DDR1Q08345 913 aa13.65□□□□□ -0.22
SMARCA4-213ENST00000587988 TCIRG1Q13488 830 aa13.65□□□□□ -0.22
SMARCA4-213ENST00000587988 ZNF34Q8IZ26 560 aa13.65□□□□□ -0.22
SMARCA4-213ENST00000587988 MYD88Q99836 296 aa13.65□□□□□ -0.22
SMARCA4-213ENST00000587988 METTL22Q9BUU2 404 aaPredicted RBP13.65□□□□□ -0.22
SMARCA4-213ENST00000587988 TNNQ9UQP3 1299 aa13.65□□□□□ -0.22
SMARCA4-213ENST00000587988 NIP7Q9Y221 180 aaKnown RBP eCLIP13.65□□□□□ -0.22
SMARCA4-213ENST00000587988 PTPRCP08575 1304 aa13.64□□□□□ -0.23
SMARCA4-213ENST00000587988 ANKRD36CQ5JPF3 1778 aa13.64□□□□□ -0.23
SMARCA4-213ENST00000587988 ATP5J2-PTCD1G3V325 749 aa13.64□□□□□ -0.23
SMARCA4-213ENST00000587988 MMP10P09238 476 aa13.64□□□□□ -0.23
SMARCA4-213ENST00000587988 PTGER2P43116 358 aa13.64□□□□□ -0.23
SMARCA4-213ENST00000587988 DNAAF4Q8WXU2 420 aa13.64□□□□□ -0.23
SMARCA4-213ENST00000587988 FRAT1Q92837 279 aaPredicted RBP13.64□□□□□ -0.23
SMARCA4-213ENST00000587988 SGIP1Q9BQI5 828 aa13.64□□□□□ -0.23
SMARCA4-213ENST00000587988 ISCA1Q9BUE6 129 aa13.64□□□□□ -0.23
SMARCA4-213ENST00000587988 ATP10DQ9P241 1426 aa13.64□□□□□ -0.23
SMARCA4-213ENST00000587988 UBN2Q6ZU65 1347 aa13.64□□□□□ -0.23
SMARCA4-213ENST00000587988 POLRMTO00411 1230 aaKnown RBP13.63□□□□□ -0.23
SMARCA4-213ENST00000587988 HSP90AB3PQ58FF7 597 aa13.63□□□□□ -0.23
SMARCA4-213ENST00000587988 SETDB2Q96T68 719 aa13.63□□□□□ -0.23
SMARCA4-213ENST00000587988 KIF16BQ96L93 1317 aa13.63□□□□□ -0.23
SMARCA4-213ENST00000587988 FAM177BA6PVY3 158 aa13.62□□□□□ -0.23
SMARCA4-213ENST00000587988 PLIN1O60240 522 aa13.62□□□□□ -0.23
SMARCA4-213ENST00000587988 IGKV5-2P06315 115 aa13.62□□□□□ -0.23
SMARCA4-213ENST00000587988 TRIM27P14373 513 aa13.62□□□□□ -0.23
SMARCA4-213ENST00000587988 SUSD4Q5VX71 490 aa13.62□□□□□ -0.23
SMARCA4-213ENST00000587988 SLC4A10Q6U841 1118 aa13.62□□□□□ -0.23
SMARCA4-213ENST00000587988 ARHGAP45Q92619 1136 aa13.62□□□□□ -0.23
SMARCA4-213ENST00000587988 SPON1Q9HCB6 807 aa13.62□□□□□ -0.23
SMARCA4-213ENST00000587988 SERPINB2P05120 415 aa13.61□□□□□ -0.23
SMARCA4-213ENST00000587988 CWF19L2Q2TBE0 894 aaKnown RBP13.61□□□□□ -0.23
SMARCA4-213ENST00000587988 BEND3Q5T5X7 828 aa13.61□□□□□ -0.23
SMARCA4-213ENST00000587988 ATF7IPQ6VMQ6 1270 aa13.61□□□□□ -0.23
SMARCA4-213ENST00000587988 NLRP10Q86W26 655 aa13.61□□□□□ -0.23
SMARCA4-213ENST00000587988 PARP3Q9Y6F1 533 aa13.61□□□□□ -0.23
SMARCA4-213ENST00000587988 AFDNP55196 1824 aaKnown RBP13.61□□□□□ -0.23
SMARCA4-213ENST00000587988 CARMIL3Q8ND23 1372 aa13.6□□□□□ -0.23
SMARCA4-213ENST00000587988 NEURL1BA8MQ27 555 aa13.6□□□□□ -0.23
SMARCA4-213ENST00000587988 IPO8O15397 1037 aaKnown RBP13.6□□□□□ -0.23
SMARCA4-213ENST00000587988 POLD1P28340 1107 aa13.6□□□□□ -0.23
SMARCA4-213ENST00000587988 TRIM28Q13263 835 aaKnown RBP13.6□□□□□ -0.23
SMARCA4-213ENST00000587988 ZKSCAN2Q63HK3 967 aa13.6□□□□□ -0.23
SMARCA4-213ENST00000587988 CCDC24Q8N4L8 307 aa13.6□□□□□ -0.23
SMARCA4-213ENST00000587988 CLUAP1Q96AJ1 413 aa13.6□□□□□ -0.23
SMARCA4-213ENST00000587988 API5Q9BZZ5 524 aaKnown RBP13.6□□□□□ -0.23
SMARCA4-213ENST00000587988 NRXN2Q9P2S2 1712 aa13.59□□□□□ -0.23
SMARCA4-213ENST00000587988 NTSR2O95665 410 aa13.59□□□□□ -0.23
SMARCA4-213ENST00000587988 NEXNQ0ZGT2 675 aa13.59□□□□□ -0.23
SMARCA4-213ENST00000587988 PARP10Q53GL7 1025 aa13.59□□□□□ -0.23
SMARCA4-213ENST00000587988 NUTM1Q86Y26 1132 aa13.59□□□□□ -0.23
SMARCA4-213ENST00000587988 SYNE4Q8N205 404 aa13.59□□□□□ -0.23
SMARCA4-213ENST00000587988 CCDC191Q8NCU4 936 aa13.59□□□□□ -0.23
SMARCA4-213ENST00000587988 LINS1Q8NG48 757 aa13.59□□□□□ -0.23
SMARCA4-213ENST00000587988 JARID2Q92833 1246 aaPredicted RBP13.59□□□□□ -0.23
SMARCA4-213ENST00000587988 RLBP1P12271 317 aa13.58□□□□□ -0.24
SMARCA4-213ENST00000587988 PRR5LQ6MZQ0 368 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms