RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 SECISBP2LQ93073 1101 aaKnown RBP11.79□□□□□ -0.52
LINC01539-201ENST00000587904 LARP1Q6PKG0 1096 aaKnown RBP11.78□□□□□ -0.52
LINC01539-201ENST00000587904 ILDR2Q71H61 639 aa11.78□□□□□ -0.52
LINC01539-201ENST00000587904 DHX37Q8IY37 1157 aaKnown RBP11.78□□□□□ -0.52
LINC01539-201ENST00000587904 PHLPP1O60346 1717 aa11.78□□□□□ -0.52
LINC01539-201ENST00000587904 TBC1D32Q96NH3 1257 aa11.77□□□□□ -0.52
LINC01539-201ENST00000587904 STRN4Q9NRL3 753 aa11.77□□□□□ -0.52
LINC01539-201ENST00000587904 FAM13BQ9NYF5 915 aa11.77□□□□□ -0.52
LINC01539-201ENST00000587904 WNK3Q9BYP7 1800 aa11.77□□□□□ -0.53
LINC01539-201ENST00000587904 LRP6O75581 1613 aa11.77□□□□□ -0.53
LINC01539-201ENST00000587904 SLC39A6Q13433 755 aa11.77□□□□□ -0.53
LINC01539-201ENST00000587904 ZNF496Q96IT1 587 aaPredicted RBP11.77□□□□□ -0.53
LINC01539-201ENST00000587904 LRRFIP2Q9Y608 721 aaKnown RBP11.77□□□□□ -0.53
LINC01539-201ENST00000587904 DISP2A7MBM2 1401 aa11.77□□□□□ -0.53
LINC01539-201ENST00000587904 TNS2Q63HR2 1409 aa11.77□□□□□ -0.53
LINC01539-201ENST00000587904 SEC24BO95487 1268 aa11.76□□□□□ -0.53
LINC01539-201ENST00000587904 SLC20A2Q08357 652 aa11.76□□□□□ -0.53
LINC01539-201ENST00000587904 PDIA6Q15084 440 aa11.76□□□□□ -0.53
LINC01539-201ENST00000587904 PROSER3Q2NL68 480 aa11.76□□□□□ -0.53
LINC01539-201ENST00000587904 PLEKHM2Q8IWE5 1019 aa11.76□□□□□ -0.53
LINC01539-201ENST00000587904 LINS1Q8NG48 757 aa11.76□□□□□ -0.53
LINC01539-201ENST00000587904 GRPEL1Q9HAV7 217 aa11.76□□□□□ -0.53
LINC01539-201ENST00000587904 BECN1Q14457 450 aa11.75□□□□□ -0.53
LINC01539-201ENST00000587904 SSH3Q8TE77 659 aa11.75□□□□□ -0.53
LINC01539-201ENST00000587904 BTG4Q9NY30 223 aa11.75□□□□□ -0.53
LINC01539-201ENST00000587904 MAP3K2Q9Y2U5 619 aa11.75□□□□□ -0.53
LINC01539-201ENST00000587904 KCPQ6ZWJ8 1503 aa11.75□□□□□ -0.53
LINC01539-201ENST00000587904 TOGARAM1Q9Y4F4 1720 aa11.75□□□□□ -0.53
LINC01539-201ENST00000587904 PRAMEF22A3QJZ6 481 aa11.75□□□□□ -0.53
LINC01539-201ENST00000587904 ANXA1P04083 346 aa11.75□□□□□ -0.53
LINC01539-201ENST00000587904 TTC22Q5TAA0 569 aa11.75□□□□□ -0.53
LINC01539-201ENST00000587904 OSBPL3Q9H4L5 887 aa11.75□□□□□ -0.53
LINC01539-201ENST00000587904 UTYO14607 1347 aa11.74□□□□□ -0.53
LINC01539-201ENST00000587904 TOM1O60784 492 aa11.74□□□□□ -0.53
LINC01539-201ENST00000587904 CDK11BP21127 795 aaKnown RBP11.74□□□□□ -0.53
LINC01539-201ENST00000587904 IRX3P78415 501 aaPredicted RBP11.74□□□□□ -0.53
LINC01539-201ENST00000587904 MTX1Q13505 466 aa11.74□□□□□ -0.53
LINC01539-201ENST00000587904 POLA2Q14181 598 aa11.74□□□□□ -0.53
LINC01539-201ENST00000587904 LRRCC1Q9C099 1032 aa11.74□□□□□ -0.53
LINC01539-201ENST00000587904 RNF216Q9NWF9 866 aaPredicted RBP11.74□□□□□ -0.53
LINC01539-201ENST00000587904 PNMA6EA0A0J9YXQ4 647 aa11.74□□□□□ -0.53
LINC01539-201ENST00000587904 SOCS7O14512 581 aa11.74□□□□□ -0.53
LINC01539-201ENST00000587904 RAB11FIP3O75154 756 aa11.74□□□□□ -0.53
LINC01539-201ENST00000587904 CDC45O75419 566 aa11.74□□□□□ -0.53
LINC01539-201ENST00000587904 ZSCAN30Q86W11 494 aa11.74□□□□□ -0.53
LINC01539-201ENST00000587904 PLCD3Q8N3E9 789 aa11.74□□□□□ -0.53
LINC01539-201ENST00000587904 NRAPQ86VF7 1730 aa11.74□□□□□ -0.53
LINC01539-201ENST00000587904 NEXNQ0ZGT2 675 aa11.73□□□□□ -0.53
LINC01539-201ENST00000587904 HSP90AB4PQ58FF6 505 aa11.73□□□□□ -0.53
LINC01539-201ENST00000587904 PPP4R3CPQ6ZMV5 832 aa11.73□□□□□ -0.53
LINC01539-201ENST00000587904 RGS22Q8NE09 1264 aa11.73□□□□□ -0.53
LINC01539-201ENST00000587904 PRDM10Q9NQV6 1147 aa11.73□□□□□ -0.53
LINC01539-201ENST00000587904 AOX1Q06278 1338 aa11.72□□□□□ -0.53
LINC01539-201ENST00000587904 SAMD1Q6SPF0 538 aaPredicted RBP11.72□□□□□ -0.53
LINC01539-201ENST00000587904 RIC3Q7Z5B4 369 aa11.72□□□□□ -0.53
LINC01539-201ENST00000587904 CDCA7Q9BWT1 371 aaPredicted RBP11.72□□□□□ -0.53
LINC01539-201ENST00000587904 NWD2Q9ULI1 1742 aa11.72□□□□□ -0.53
LINC01539-201ENST00000587904 ARFGEF2Q9Y6D5 1785 aa11.72□□□□□ -0.53
LINC01539-201ENST00000587904 NBPF7P0C2Y1 421 aaPredicted RBP11.72□□□□□ -0.53
LINC01539-201ENST00000587904 GSPT1P15170 499 aaKnown RBP11.72□□□□□ -0.53
LINC01539-201ENST00000587904 LRP10Q7Z4F1 713 aa11.72□□□□□ -0.53
LINC01539-201ENST00000587904 C22orf23Q9BZE7 217 aa11.72□□□□□ -0.53
LINC01539-201ENST00000587904 C9orf78Q9NZ63 289 aaPredicted RBP11.72□□□□□ -0.53
LINC01539-201ENST00000587904 MFAP1P55081 439 aaKnown RBP11.71□□□□□ -0.53
LINC01539-201ENST00000587904 PPP1R42Q7Z4L9 355 aa11.71□□□□□ -0.53
LINC01539-201ENST00000587904 DDX54Q8TDD1 881 aaKnown RBP11.71□□□□□ -0.53
LINC01539-201ENST00000587904 XAGE3Q8WTP9 111 aa11.71□□□□□ -0.53
LINC01539-201ENST00000587904 EXOC6BQ9Y2D4 811 aa11.71□□□□□ -0.53
LINC01539-201ENST00000587904 USP16Q9Y5T5 823 aa11.71□□□□□ -0.53
LINC01539-201ENST00000587904 COL15A1P39059 1388 aa11.71□□□□□ -0.54
LINC01539-201ENST00000587904 SALL3Q9BXA9 1300 aa11.71□□□□□ -0.54
LINC01539-201ENST00000587904 VGLL3A8MV65 326 aa11.71□□□□□ -0.54
LINC01539-201ENST00000587904 GRM8O00222 908 aa11.71□□□□□ -0.54
LINC01539-201ENST00000587904 SRGAP3O43295 1099 aa11.71□□□□□ -0.54
LINC01539-201ENST00000587904 SMARCA5O60264 1052 aaPredicted RBP11.71□□□□□ -0.54
LINC01539-201ENST00000587904 HSPA1LP34931 641 aa11.71□□□□□ -0.54
LINC01539-201ENST00000587904 RBM25P49756 843 aaKnown RBP11.71□□□□□ -0.54
LINC01539-201ENST00000587904 CASC1Q6TDU7 716 aa11.71□□□□□ -0.54
LINC01539-201ENST00000587904 TBC1D9Q6ZT07 1266 aa11.71□□□□□ -0.54
LINC01539-201ENST00000587904 METTL22Q9BUU2 404 aaPredicted RBP11.71□□□□□ -0.54
LINC01539-201ENST00000587904 ANTXR1Q9H6X2 564 aa11.71□□□□□ -0.54
LINC01539-201ENST00000587904 TMOD3Q9NYL9 352 aa11.71□□□□□ -0.54
LINC01539-201ENST00000587904 MYL6BP14649 208 aa11.7□□□□□ -0.54
LINC01539-201ENST00000587904 PDE1AP54750 535 aa11.7□□□□□ -0.54
LINC01539-201ENST00000587904 PIP4K2BP78356 416 aa11.7□□□□□ -0.54
LINC01539-201ENST00000587904 CCDC173Q0VFZ6 552 aa11.7□□□□□ -0.54
LINC01539-201ENST00000587904 DNTTIP2Q5QJE6 756 aaKnown RBP11.7□□□□□ -0.54
LINC01539-201ENST00000587904 COPS6Q7L5N1 327 aa11.7□□□□□ -0.54
LINC01539-201ENST00000587904 PPP1R9BQ96SB3 815 aa11.7□□□□□ -0.54
LINC01539-201ENST00000587904 THRAP3Q9Y2W1 955 aaKnown RBP11.7□□□□□ -0.54
LINC01539-201ENST00000587904 TUBGCP6Q96RT7 1819 aa11.7□□□□□ -0.54
LINC01539-201ENST00000587904 NUP188Q5SRE5 1749 aa11.69□□□□□ -0.54
LINC01539-201ENST00000587904 APBB1O00213 710 aa11.69□□□□□ -0.54
LINC01539-201ENST00000587904 MMP14P50281 582 aa11.69□□□□□ -0.54
LINC01539-201ENST00000587904 AIMP1Q12904 312 aaKnown RBP11.69□□□□□ -0.54
LINC01539-201ENST00000587904 ANKRD13DQ6ZTN6 518 aa11.69□□□□□ -0.54
LINC01539-201ENST00000587904 KIF1BPQ96EK5 621 aa11.69□□□□□ -0.54
LINC01539-201ENST00000587904 STAP2Q9UGK3 403 aa11.69□□□□□ -0.54
LINC01539-201ENST00000587904 UQCRHLA0A096LP55 91 aa11.69□□□□□ -0.54
LINC01539-201ENST00000587904 NEURL1BA8MQ27 555 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms